Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ruellia_20speciosa_20[genbank_20GCA_5F001909325.1_202016-12-20] 794,288 sequences; 740,035,655 total letters Query= NC_008296.2 Length=177300 Score E Sequences producing significant alignments: (Bits) Value seq784841 565 3e-156 seq585748 480 9e-131 seq585461 378 8e-100 seq585752 374 1e-98 seq492030 342 6e-89 seq567144 156 5e-33 seq789568 116 4e-21 seq553985 111 2e-19 seq572160 102 9e-17 seq375883 93.3 5e-14 seq364109 91.5 2e-13 seq572830 86.0 7e-12 >seq784841 Length=3474 Score = 565 bits (626), Expect = 3e-156 Identities = 725/992 (73%), Gaps = 8/992 (1%) Strand=Plus/Minus Query 166053 CTTCTGCGAATGGGTTACCTCTACCAACAACCGTCTTTATGTTGGTTGGTTTGGCACACT 166112 |||||| | ||| | ||| ||| | ||||||||||| |||| ||| |||| | Sbjct 2999 CTTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGGTTGGTGTTTT 2940 Query 166113 GATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCTTTCGTAGCGGCAC 166171 |||||| || || | ||| | ||||| ||||| || || | || ||| | | || | Sbjct 2939 GATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATTGCCTTCATTGTTGCTC 2881 Query 166172 CTCCTGTCGATATCGATGGGATCCGTGAGCCCGTAGCAGGCTCTCTAATGTATGGTAACA 166231 |||| || ||||| ||||| || ||||| || || | || |||||| | ||||| ||| Sbjct 2880 CTCCAGTGGATATTGATGGTATTCGTGAACCTGTTTCTGGGTCTCTACTTTATGGAAACG 2821 Query 166232 ACATCATCTCTGGTGCTGTTGTCCC--CTCCTCCAACGCAATTGGTCTTCACTTCTATCC 166289 | || ||||| ||||| || | || || || || || || ||| | || || || || Sbjct 2820 ATATTATCTCAGGTGCCATTATTCCTACTTCTGCA--GCTATCGGTTTGCATTTTTACCC 2763 Query 166290 CATCTGGGAAGCAGCATCACTTGATGAATGGCTTTATAACGGTGGTCCTTTCCAGCTCGT 166349 |||||||||||| |||| ||||||| ||| | || ||| ||||||||| | || | Sbjct 2762 AATCTGGGAAGCAACATCCGTTGATGAGTGGTTATACAACTGTGGTCCTTATGAACTAAT 2703 Query 166350 AGTCTTCCACTTCCTCATCGGCATCTATGCCTACATGGGTCGTGAATGGGAATTGTCTTA 166409 || | |||||| | | || | | |||||||||||||| |||||| | || Sbjct 2702 TGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAAATTAGTTT 2643 Query 166410 CCGCCTCGGTATGCGTCCTTGGATTTGCGTAGCATACTCTGCACCTGTTGCAGCAGCATC 166469 ||| || |||||||| ||||||||| | ||||| | | ||||||||||| || Sbjct 2642 CCGTCTGGGTATGCGACCTTGGATTGCTTTTGCATATTTAACTCCTGTTGCAGCTGCTAT 2583 Query 166470 CGCAGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCCCTGGG 166529 ||| || ||| || |||| || | |||||||| ||| ||||| | ||||| || || Sbjct 2582 CGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGG 2523 Query 166530 TATCAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTCATGCA 166589 || ||| || ||||||| ||| |||| |||||||| |||||||||||||| ||||| Sbjct 2522 AATTTCTGGTACTTTCAACTTTATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCA 2463 Query 166590 CCCCTTCCATATGCTGGGTGTAGCAGGTGTATTCGGTGGGTCACTTTTCTCGGCAATGCA 166649 ||| || || ||| | || ||||| ||||||||||| || || || ||| || ||||| Sbjct 2462 CCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAATGCTATGCA 2403 Query 166650 CGGCAGTCTCGTTACTTCCTCGCTCG-TCCGTGAGACCACTGAAACTGAGTCTCAAAACT 166708 || | | ||||| | | | | || | || ||||| |||| ||| ||| || Sbjct 2402 TGGTTCCTTGATAACTTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTACTAATG 2344 Query 166709 ATGGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGTGGCTGCTCATGGTTACT 166768 | |||||||| ||||||||||| ||||| || || || || || || ||||||||||| | Sbjct 2343 AAGGTTACAAATTTGGTCAAGAGGAAGAAACTTATAATATTGTAGCCGCTCATGGTTATT 2284 Query 166769 TCGGTCGCCTGATCTTCCAATACGCTTCCTTCAACAACTCTCGCTCGCTGCACTTCTTCC 166828 | || || ||||| |||||||| || || ||||||||||| || | ||||||||| Sbjct 2283 TTGGCCGACTGATATTCCAATATACTAGTTTTAACAACTCTCGTTCATTACACTTCTTCT 2224 Query 166829 TCGCAGCATGGCCTGTTGTCGGTATCTGGTTTACTGCTCTTGGTGTTAGCACCATGGCAT 166888 | || || |||||||| || ||||||||||| |||||| | ||| ||||||| ||||| | Sbjct 2223 TAGCTGCTTGGCCTGTAGTGGGTATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTT 2164 Query 166889 TCAACCTCAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCA 166948 ||||| | ||||||||||| ||| |||| || | | ||| |||| || ||||| | | Sbjct 2163 TCAACTTAAACGGTTTCAATTTCTACCAATCTGTAGTTGATAGTCAAGGCCGTGTAATTA 2104 Query 166949 ACACTTGGGCAGATGTCCTCAACCGTGCTGGTCTGGGTATGGAAGTAATGCACGAGCGTA 167008 | |||||||| ||| || |||| |||||| || ||| ||||||| ||||| || |||| Sbjct 2103 ATACTTGGGCTGATATCATCAATCGTGCTAACCTTGGTCTGGAAGTTATGCATGAACGTA 2044 Query 167009 ATGCTCACAACTTCCCTCTGGATCTTGCTGCT 167040 ||||||| ||||||||||||||| | ||| || Sbjct 2043 ATGCTCATAACTTCCCTCTGGATTTAGCTACT 2012 >seq585748 Length=906 Score = 480 bits (532), Expect = 9e-131 Identities = 613/837 (73%), Gaps = 8/837 (1%) Strand=Plus/Minus Query 166075 ACCAACAACCGTCTTTATGTTGGTTGGTTTGGCACACTGATGATTCCAACTCTGTTGGCA 166134 ||| | ||||||||||| |||| |||||||| ||||||| || || | ||| | Sbjct 834 ACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACC 775 Query 166135 GCAACCATCTGT-TTCATCGTCGCTTTCGTAGCGGCACCTCCTGTCGATATCGATGGGAT 166193 ||||| | ||| || || | |||||| | | || ||||| || ||||| ||||| || Sbjct 774 GCAACTTT-TGTATTTATTATTGCTTTCATTACTGCTCCTCCAGTGGATATTGATGGTAT 716 Query 166194 CCGTGAGCCCGTAGCAGGCTCTCTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGT 166253 ||||| || || | || |||||| | || || ||||| || ||||| ||||| || | Sbjct 715 TCGTGAACCTGTTTCTGGGTCTCTACTTTACGGAAACAATATTATCTCAGGTGCCATTAT 656 Query 166254 CCC--CTCCTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCAGCATCACTT 166311 || || || || ||||| | | | || || || || ||||||||||||||||| || Sbjct 655 TCCTACTTCTGCA--GCAATCGATTTGCATTTTTACCCAATCTGGGAAGCAGCATCCGTT 598 Query 166312 GATGAATGGCTTTATAACGGTGGTCCTTTCCAGCTCGTAGTCTTCCACTTCCTCATCGGC 166371 ||||| ||| | || ||||||||||||| | || | || | ||| || | | || Sbjct 597 GATGAGTGGTTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACATCTTACTTGGT 538 Query 166372 ATCTATGCCTACATGGGTCGTGAATGGGAATTGTCTTACCGCCTCGGTATGCGTCCTTGG 166431 | | |||||||||||||| |||||| | || ||| || |||||||| |||||| Sbjct 537 GTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGACCTTGG 478 Query 166432 ATTTGCGTAGCATACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTCCTGGTCTATCCT 166491 ||| || ||||| || || ||||||||||| | | || || ||| || |||| || Sbjct 477 ATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGTTACTGCTGTTTTCTTGATCTACCCA 418 Query 166492 TTCGGTCAAGGTTCTTTCTCTGACGCAATGCCCCTGGGTATCAGTGGCACCTTCAACTAC 166551 |||||||||| ||| ||||| | ||||| || || || ||| || ||||||| Sbjct 417 ATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTT 358 Query 166552 ATGCTTGTCTTCCAAGCAGAGCACAACATCCTCATGCACCCCTTCCATATGCTGGGTGTA 166611 ||| |||| ||||| || |||||||||||||| |||||||| || || ||| | || ||| Sbjct 357 ATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTA 298 Query 166612 GCAGGTGTATTCGGTGGGTCACTTTTCTCGGCAATGCACGGCAGTCTCGTTACTTCCTCG 166671 || ||||||||||| || || || ||| | ||||| || | || | ||| | | Sbjct 297 GCTGGTGTATTCGGCGGCTCCCTATTCAGTTCTATGCATGGTTCCTTGGTAAGTTC-TAG 239 Query 166672 CTCG-TCCGTGAGACCACTGAAACTGAGTCTCAAAACTATGGTTACAAGTTTGGTCAAGA 166730 | | || | || ||||| |||| ||| || || | |||||||| ||||||||||| Sbjct 238 TTTGATCAGGGAAACCACAGAAAATGAATCCGCTAATGAAGGTTACAAATTTGGTCAAGA 179 Query 166731 AGAAGAGACCTACAACATCGTGGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATA 166790 ||||| || || || || || || ||||||||||| || || || ||||||||||||| Sbjct 178 GGAAGAAACTTATAATATTGTAGCCGCTCATGGTTATTTTGGCCGACTGATCTTCCAATT 119 Query 166791 CGCTTCCTTCAACAACTCTCGCTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGG 166850 ||| |||||||||||||| || | ||||||||||| || || |||||||| || || Sbjct 118 TGCTAGTTTCAACAACTCTCGTTCATTACACTTCTTCCTAGCTGCTTGGCCTGTAGTGGG 59 Query 166851 TATCTGGTTTACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACGGTTTCAA 166907 ||||| ||| |||||| | ||| ||||||| ||||| |||||| | ||||||||||| Sbjct 58 TATCTAGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAACTTAAACGGTTTCAA 2 >seq585461 Length=917 Score = 378 bits (418), Expect = 8e-100 Identities = 419/559 (75%), Gaps = 0/559 (0%) Strand=Plus/Minus Query 167754 GTTGGTTCTTTGCACCGTCGTTTGGTGTTGCAGCGATATTTAGATTCCTACTATTCCTAC 167813 |||||||||||||||| |||||||| ||||| |||||| ||||| | || || | | Sbjct 916 GTTGGTTCTTTGCACCTAGTTTTGGTGTAGCAGCTATATTTCGATTCATCCTCTTTTTTC 857 Query 167814 AGGGTTTCCATAACTGGACGCTCAACCCTTTCCATATGATGGGAGTTGCTGGTATCCTAG 167873 | || || ||||| ||||| || ||||| || ||||||||||||||||||||| | | | Sbjct 856 AAGGATTTCATAATTGGACTCTGAACCCATTTCATATGATGGGAGTTGCTGGTGTATTGG 797 Query 167874 GCGGTGCATTGCTTTCTGCAATCCATGGTGTTACAGTAGAGAATACTCTGTATGAAGATG 167933 | | ||| || || | ||| || ||||||| ||| ||||| |||||| | | |||||||| Sbjct 796 GGGCTGCTTTACTATGTGCTATTCATGGTGCTACCGTAGAAAATACTTTATTTGAAGATG 737 Query 167934 GTGAGCAAGCAAACACTTTCAAAGCATTTGATACGACTCAGGAAGAGGAAACTTATTCCA 167993 |||| ||||| || ||| || ||| | | ||||| | || ||||||||||||| Sbjct 736 GTGATGGCGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCCA 677 Query 167994 TGGTCACTGCTAACCGATTCTGGTCTCAAATTTTTGGTATTGCTTTCAGCAATAAGCGTT 168053 ||||||| |||||||| || ||||| ||||| ||||| ||||||| ||||| |||| Sbjct 676 TGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATACACGTT 617 Query 168054 GGTTGCACTTCTTTATGCTTTTCGTTCCTGTCATGGGACTTTGGACAAGTTCTATTGGTA 168113 |||| || ||||||||| | || || || || | || | |||| ||| || |||| Sbjct 616 GGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAT 557 Query 168114 TCATCGGTCTCGCACTTAATCTTCGTGCTTATGACTTTGTGTCTCAGGAAGTTAGAGCAG 168173 | ||||| | || || || || ||||| |||||||| || ||||| ||| || | || | Sbjct 556 TAGTCGGTTTGGCCCTGAACCTACGTGCCTATGACTTCGTTTCTCAAGAAATTCGTGCCG 497 Query 168174 CAGAGGATCCAGAGTTTGAAACTTTCTATACGAAAAACATCCTCCTCAATGAAGGACTCC 168233 | || ||||| || ||||| |||||||| || ||||| || || | || ||||| | | Sbjct 496 CGGAAGATCCGGAATTTGAGACTTTCTACACAAAAAAAATTCTATTAAACGAAGGTATTC 437 Query 168234 GTGCCTGGATGGCTCCAGTAGACCAACCACATGAAAACTTTGTATTCCCAGAAGAAGTAT 168293 |||| |||||||| | ||| || || ||||||||| |||||||||| || || | Sbjct 436 GTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGCTTC 377 Query 168294 TGCCAAGAGGCAACGCTCT 168312 | ||| | || |||||||| Sbjct 376 TACCACGTGGAAACGCTCT 358 >seq585752 Length=1498 Score = 374 bits (414), Expect = 1e-98 Identities = 484/662 (73%), Gaps = 5/662 (1%) Strand=Plus/Minus Query 166381 TACATGGGTCGTGAATGGGAATTGTCTTACCGCCTCGGTATGCGTCCTTGGATTTGCGTA 166440 |||||||||| ||| |||||| | || || || |||||||| |||||||| || Sbjct 1471 TACATGGGTCATGAGTGGGAACTTAGTTTCCTTCTGGGTATGCGATCTTGGATTGTTGTT 1412 Query 166441 GCATACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTCCTGGTCTATCCTTTCGGTCAA 166500 ||||| || || | || | |||| || ||| || ||| | |||| | |||||||| Sbjct 1411 GCATATTCAGCTCTTGCTACAGCTGCTACCGTTGTTTTCTTAATCTACCAGATCGGTCAA 1352 Query 166501 GGTTCTTTCTCTGACGCAATGCCCCTGGGTATCAGTGGCACCTTCAACTACATGCTTGTC 166560 || ||| ||||| | ||||| || || || ||| || ||||||| ||| |||| Sbjct 1351 GGAAGTTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTTATGATTGTA 1292 Query 166561 TTCCAAGCAGAGCACAACATCCTCATGCACCCCTTCCATATGCTGGGTGTAGCAGGTGTA 166620 ||||| || ||||||||||||| |||||||| || || ||| | |||||||| |||||| Sbjct 1291 TTCCAGGCTAAGCACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTA 1232 Query 166621 TTCGGTGGGTCACTTTTCTCGGCAATGCACGGCAGTCTCGTTACTTCCTCGCTCG-TCCG 166679 ||||| || || | ||| || ||| | || | || ||||| | | | | | | Sbjct 1231 TTCGGCGGCTCCTTATTCAATGCTATGAATGGTTCCTTTGTAACTTC-TAGTTTGATTAG 1173 Query 166680 TGAGACCACTGAAACTGAGTCTCAAAACT-ATGGTTACAAGTTTGGTCAAGAAGAAGAGA 166738 || ||||| |||| ||| || || | | | |||||||| | ||||||||| ||||| | Sbjct 1172 GGAAACCACAGAAAATGAATC-CACTAGTGAAGGTTACAAATGTGGTCAAGAGGAAGAAA 1114 Query 166739 CCTACAACATCGTGGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATACGCTTCCT 166798 | || || || || || ||||||||||| || ||||| |||||||||||||| || | Sbjct 1113 CTTATAATATTGTAGCCGCTCATGGTTATTTTGGTCGACTGATCTTCCAATATACTAGTT 1054 Query 166799 TCAACAACTCTCGCTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGT 166858 ||||||||||||| || | ||||||||||| || | |||||||| | ||| ||| || Sbjct 1053 TCAACAACTCTCGTTCATTACACTTCTTCCTAGCTTCTTGGCCTGTACTAGGTGTCTAGT 994 Query 166859 TTACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGT 166918 | ||| || | ||| ||| || |||| |||||| | |||| |||||| |||||||| | Sbjct 993 TCACTACTTTAGGTATTACAACTATGGTTTTCAACTTAAACGATTTCAATTTCAACCAAT 934 Query 166919 CCATCATCGATGGTCAGGGTCGTGTGCTCAACACTTGGGCAGATGTCCTCAACCGTGCTG 166978 | || | ||| | || || ||| | | || |||| ||| ||| || |||| |||||| Sbjct 933 CTATAGTTGATAGCCAAGGCCGT-TAATTAATACTTAGGCTGATATCATCAATCGTGCTA 875 Query 166979 GTCTGGGTATGGAAGTAATGCACGAGCGTAATGCTCACAACTTCCCTCTGGATCTTGCTG 167038 || ||||||||||| ||||| || | ||||||| ||||||||||| ||| | |||| Sbjct 874 ACCTTGGTATGGAAGTTATGCATGAAACTCATGCTCATAACTTCCCTCTAGATTTAGCTG 815 Query 167039 CT 167040 || Sbjct 814 CT 813 >seq492030 Length=881 Score = 342 bits (378), Expect = 6e-89 Identities = 370/486 (76%), Gaps = 6/486 (1%) Strand=Plus/Plus Query 166493 TCGGTCAAGGTTCTTTCTCTGACGCAATGCCCCTGGGTATCAGTGGCACCTTCAACTACA 166552 |||||||||| ||| ||||| | ||||| || || || ||| || ||||||| | Sbjct 399 TCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTTA 458 Query 166553 TGCTTGTCTTCCAAGCAGAGCACAACATCCTCATGCACCCCTTCCATATGCTGGGTGTAG 166612 || |||| ||| | || |||||||||||||| |||||||| || || ||| | || |||| Sbjct 459 TGATTGTATTCTAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAG 518 Query 166613 CAGGTGTATTCGGTGGGTCACTTTTCTCGGCAATGCACGGCAGTC--TCGTTACTTCCTC 166670 | ||||||||||| || || || ||| || ||||| | | || | || ||||| | Sbjct 519 CTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATG--ATTCCTTGGTAACTTC-TA 575 Query 166671 GCTCG-TCCGTGAGACCACTGAAACTGAGTCTCAAAACTATGGTTACAAGTTTGGTCAAG 166729 | | | || | || ||||| |||| ||| || || | |||||||| |||||||||| Sbjct 576 GTTTGATCAGGGAAACCACAGAAAATGAATCCGCTAATGAAGGTTACAAATTTGGTCAAG 635 Query 166730 AAGAAGAGACCTACAACATCGTGGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAAT 166789 | ||||| || || || || || || ||||||||||| || || || ||||||||||||| Sbjct 636 AGGAAGAAACTTATAATATTGTAGCCGCTCATGGTTATTTTGGCCGACTGATCTTCCAAT 695 Query 166790 ACGCTTCCTTCAACAACTCTCGCTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCG 166849 | ||| |||||||||||||| || | ||||||||||| || || |||||||| || | Sbjct 696 ATGCTAGTTTCAACAACTCTCGTTCATTACACTTCTTCCTAGCTGCTTGGCCTGTAGTGG 755 Query 166850 GTATCTGGTTTACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACT 166909 |||||||||| |||||| | ||| ||||||| ||||| |||||| | ||||||||||| | Sbjct 756 GTATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCCTTCAACTTAAACGGTTTCAATT 815 Query 166910 TCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACACTTGGGCAGATGTCCTCA 166969 ||||||| || | | ||| |||| || ||||| | || |||||||| ||| || ||| Sbjct 816 TCAACCAATCTGTAGTTGATAGTCAAGGCCGTGTAATTAATACTTGGGCTGATATCATCA 875 Query 166970 ACCGTG 166975 | |||| Sbjct 876 ATCGTG 881 >seq567144 Length=1974 Score = 156 bits (172), Expect = 5e-33 Identities = 142/179 (79%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 166862 CTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCA 166921 ||||| | ||| ||||||| ||||| |||||| | ||||||||||| |||||||| || Sbjct 177 CTGCTTTAGGTATTAGCACTATGGCTTTCAACTTAAACGGTTTCAATTTCAACCAATCTG 236 Query 166922 TCATCGATGGTCAGGGTCGTGTGCTCAACACTTGGGCAGATGTCCTCAACCGTGCTGGTC 166981 | | ||| |||| || ||||| | | |||||||| ||| || |||| |||||| | Sbjct 237 TAGTTGATAGTCAAGGCCGTGTAATTAGTACTTGGGCTGATATCATCAATCGTGCTAACC 296 Query 166982 TGGGTATGGAAGTAATGCACGAGCGTAATGCTCACAACTTCCCTCTGGATCTTGCTGCT 167040 | ||||||||||| ||||| || ||||||||||| ||||||||||| ||| | |||||| Sbjct 297 TTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGATTTAGCTGCT 355 >seq789568 Length=1806 Score = 116 bits (128), Expect = 4e-21 Identities = 126/167 (75%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 167978 GAGGAAACTTATTCCATGGTCACTGCTAACCGATTCTGGTCTCAAATTTTTGGTATTGCT 168037 || |||||||||||||||||||| |||||||| | ||||| ||||| ||||| ||||| Sbjct 167 GAAGAAACTTATTCCATGGTCACCGCTAACCGCATTTGGTCCCAAATCTTTGGGGTTGCT 108 Query 168038 TTCAGCAATAAGCGTTGGTTGCACTTCTTTATGCTTTTCGTTCCTGTCATGGGACTTTGG 168097 || |||||| |||||||| || ||||||||| | || || || || | || | ||| Sbjct 107 TTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGG 48 Query 168098 ACAAGTTCTATTGGTATCATCGGTCTCGCACTTAATCTTCGTGCTTA 168144 | ||| || |||| | ||||| | || || || || ||||| || Sbjct 47 ATGAGTGCTCTTGGAGTAGTCGGTTTGGCCCTGAACCTACGTGCCTA 1 >seq553985 Length=2636 Score = 111 bits (122), Expect = 2e-19 Identities = 102/128 (80%), Gaps = 2/128 (2%) Strand=Plus/Minus Query 167978 GAGGAAACTTATTCCATGGTCACTGCTAACCGATTCTGGTCTCAAATTTTTGGTATTGCT 168037 || |||||||||||||||||||| |||||||| || ||||| ||||| ||||| ||||| Sbjct 1208 GAAGAAACTTATTCCATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCT 1149 Query 168038 TTCAGCAATAAGCGTTGGTTGCACTTCTTTATGCTTTTCGTTCCTGTCATGGGACTTTGG 168097 || |||||| |||||||| || ||||||||| | || || || || || || ||| | Sbjct 1148 TTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAATTGG--TTTCG 1091 Query 168098 ACAAGTTC 168105 || | ||| Sbjct 1090 ACCAATTC 1083 >seq572160 Length=4591 Score = 102 bits (112), Expect = 9e-17 Identities = 149/208 (72%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 166588 CACCCCTTCCATATGCTGGGTGTAGCAGGTGTATTCGGTGGGTCACTTTTCTCGGCAATG 166647 ||||| || || ||| | || ||||| ||||||||||| || || || ||| | ||| Sbjct 4222 CACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGTTATG 4281 Query 166648 CACGGCAGTCTCGTTACTTCCTCGCTCG-TCCGTGAGACCACTGAAACTGAGTCTCAAAA 166706 || || | || ||||| | | | | || | || |||| |||| ||| || || Sbjct 4282 CATGGTTCCTTGGTAACTTC-TAGTTTGATCAGGGAAACCATAGAAAATGAATCCGCTAA 4340 Query 166707 CTATGGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGTGGCTGCTCATGGTTA 166766 | |||||||| ||||||||||| ||||| || || | || || || ||||||||||| Sbjct 4341 TGAAGGTTACAAATTTGGTCAAGAGGAAGAAACTTATAGTATTGTAGCCGCTCATGGTTA 4400 Query 166767 CTTCGGTCGCCTGATCTTCCAATACGCT 166794 || || | |||||||||||||| ||| Sbjct 4401 TTTTGGCCAACTGATCTTCCAATATGCT 4428 >seq375883 Length=1875 Score = 93.3 bits (102), Expect = 5e-14 Identities = 132/184 (72%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 168131 AATCTTCGTGCTTATGACTTTGTGTCTCAGGAAGTTAGAGCAGCAGAGGATCCAGAGTTT 168190 || || ||||| ||| ||||||| ||||| ||| |||| | | ||| ||| || ||| Sbjct 910 AACCTGCGTGCCTATAACTTTGTTTCTCAAGAAATTAGTGTCGTAGAAGATTTGGAATTT 851 Query 168191 GAAACTTTCTATACGAAAAACATCCTCCTCAATGAAGGACTCCGTGCCTGGATGG--CTC 168248 || ||||||||||| ||||| || || | |||||| || | | || ||||||| | Sbjct 850 GAGACTTTCTATACAAAAAATATACTATTAAATGAAAGAATTCATGGTTGGATGGGAGTT 791 Query 168249 CAGTAGACCAACCACATGAAAACTTTGTATTCCCAGAAGAAGTATTGCCAAGAGGCAACG 168308 || | | || || ||| ||||| ||||||| || || || || | | | | || |||| Sbjct 790 CA--ATATCAGCCTCATCAAAACCTTGTATTTCCTGAGGAGGTTCTACTACGTGGAAACG 733 Query 168309 CTCT 168312 |||| Sbjct 732 CTCT 729 >seq364109 Length=636 Score = 91.5 bits (100), Expect = 2e-13 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 167690 GCTTTTTCTGGTCCGATTGCTGTCTTTGTGTCTGTTTTTCTCATCTATCCTCTCGGACAG 167749 || ||||||||||| |||||||| ||||| ||||| || || || ||||| || || ||| Sbjct 393 GCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATCCACTAGGGCAG 452 Query 167750 TCCAGTTGGTTCTTTGCACCGTCGTTTGGTGTTGC 167784 || |||||||||||||||| |||||||| || Sbjct 453 TCTGGTTGGTTCTTTGCACCTAGTTTTGGTGTAGC 487 >seq572830 Length=4883 Score = 86.0 bits (94), Expect = 7e-12 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 166681 GAGACCACTGAAACTGAGTCTCAAAACTATGGTTACAAGTTTGGTCAAGAAGAAGAGACC 166740 || ||||| |||| ||| || || | |||||||| ||||||||||| ||||| || Sbjct 747 GAAACCACAGAAAATGAATCCACTAATGAAGGTTACAAATTTGGTCAAGAGGAAGAAACT 688 Query 166741 TACAACATCGTGGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCA 166787 || || || || || ||||||||||| || || || ||||||||||| Sbjct 687 TATAATATTGTAGCCGCTCATGGTTATTTTGGCCGACTGATCTTCCA 641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561600180364800