Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ruellia_20speciosa_20[genbank_20GCA_5F001909325.1_202016-12-20]
794,288 sequences; 740,035,655 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq500796 131 2e-25
seq502676 127 2e-24
seq5020 127 2e-24
seq731700 122 9e-23
seq621678 109 5e-19
seq553100 100 3e-16
seq384027 100 3e-16
seq232199 96.9 3e-15
seq659339 91.5 1e-13
seq690132 82.4 8e-11
seq588422 82.4 8e-11
seq564812 82.4 8e-11
>seq500796
Length=7474
Score = 131 bits (144), Expect = 2e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || ||||| | || |||||||||||||| ||||||||||| | || | | |||
Sbjct 1865 AGGACAAGATGGAGGGTAGATTCTTTTTGAATATTGTAATCTGCAAGAGTTCTACCATCT 1806
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
||||| ||||| || ||| |||| |||| |||||| || |||||||| ||||| || |||
Sbjct 1805 TCAAGTTGCTTTCCAGCAAAAATAAGCCTCTGCTGATCTGGAGGAATCCCTTCCTTATCT 1746
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| || | ||||| | || || || | ||| | |||
Sbjct 1745 TGAATCTTAGCCTTGACATTGTCGATGGTATCGGAGCTCTCAACCTCCAGAGTGATGGTT 1686
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| ||||| | ||||||||| ||||| |||||
Sbjct 1685 TTACCGGTAAGAGTTTTTACAAAAATCTGCAT 1654
Score = 123 bits (136), Expect = 2e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| || || |||| || || || || || || ||||||||||| | ||||| | ||
Sbjct 3006 AAGAACCAGGTGAAGGGTGGACTCCTTCTGGATATTGTAATCTGCCAGAGTGCGTCCATC 2947
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
|||||||||||| || ||| ||||||| || || || || || || || ||||| || ||
Sbjct 2946 TTCAAGCTGCTTCCCAGCAAAAATGAGGCGTTGTTGATCCGGTGGGATCCCTTCCTTGTC 2887
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
||| |||||| ||| ||| || | |||||| | || || || | ||| | ||
Sbjct 2886 TTGAATTTTTGCCTTCACATTATCAATTGTATCTGAGCTCTCAACCTCCAAAGTGATTGT 2827
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| || ||||||||||| || || ||||||||
Sbjct 2826 TTTCCCAGTCAAAGTTTTGACAAATATTTGCAT 2794
Score = 116 bits (128), Expect = 4e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || ||||||| || || ||||| || |||||||||||||| | ||| || | |||
Sbjct 1637 AGGACAAGATGAAGTGTAGACTCTTTCTGGATGTTGTAATCTGCAAGGGTTCGGCCATCT 1578
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
||||| ||||| || ||| | ||||||| |||||| || |||||||||||||| || |||
Sbjct 1577 TCAAGTTGCTTTCCAGCAAAGATGAGCCTCTGCTGATCAGGAGGAATTCCTTCCTTGTCT 1518
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| || | |||||| | || || || | ||| | ||
Sbjct 1517 TGAATCTTAGCCTTAACATTATCGATGGTATCAGAGCTCTCTACCTCGAGAGTGATAGTT 1458
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| || || | || || || || || |||||
Sbjct 1457 TTACCAGTGAGGGTCTTAACAAAGATCTGCAT 1426
Score = 113 bits (124), Expect = 4e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || ||||| || || ||||||||||| | || || | |||||||| ||||| ||
Sbjct 2078 GTAGACTCTTTCTGGATATTGTAATCTGCAAGAGTCCGGCCATCTTCAAGTTGCTTTCCA 2019
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | || |||| |||||| || |||||||||||||| || ||||| || ||| |||
Sbjct 2018 GCAAAGATTAGCCTCTGCTGATCTGGAGGAATTCCTTCCTTATCTTGAATCTTTGCCTTG 1959
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
| | || | |||||| || || || || | |||| ||| || || || | |||
Sbjct 1958 AGATTATCGATGGTATCAGAGGTTTCAACCTCGAGCGTTATGGTTTTACCAGTAAGAGTC 1899
Query 64427 TTTACGAAAATTTGCAT 64443
|| || || ||||||||
Sbjct 1898 TTCACAAAGATTTGCAT 1882
Score = 109 bits (120), Expect = 5e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| ||||| | || ||||||||||| |||||||||||||| | || | | |||
Sbjct 2549 AGCACAAGATGGAGGGTTGATTCTTTTTGGATGTTGTAATCTGCAAGTGTCCTTCCATCT 2490
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
||||| || || || || | || | | |||||||| ||||| || |||||||| ||
Sbjct 2489 TCAAGTTGTTTACCAGCGAAGATCAATCTTTGCTGGTCTGGAGGGATGCCTTCTTTGTCC 2430
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| ||||| ||| ||| || | |||||| | || ||||| | || | |||
Sbjct 2429 TGGATTTTGGCCTTGACATTGTCTATTGTATCTGAGCTTTCAACTTCCAGTGTAATTGTC 2370
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
||||| || | ||| || || ||||| ||||||
Sbjct 2369 TTGCCAGTAAGAGTCTTCACAAAAATCTGCATT 2337
Score = 107 bits (118), Expect = 2e-18
Identities = 155/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 64229 CTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCG 64288
|| || || ||||| | || ||||| ||||| || |||||||| || | ||| || |
Sbjct 2324 CTGAGAACAAGATGGAGGGTAGATTCCTTTTGGATATTGTAATCAGCAAGGGTACGGCCA 2265
Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348
|||||||| ||||| || ||| | || || | ||||||||| |||||||| ||||| ||
Sbjct 2264 TCTTCAAGTTGCTTCCCAGCAAAGATCAGTCTCTGCTGGTCAGGAGGAATACCTTCCTTA 2205
Query 64349 TCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407
|| || || ||| ||||| ||| || | ||||| | || || || | ||| |
Sbjct 2204 TCCTGGATCTTT-GCTTTGACATTGTCAATGGTATCTGAGCTCTCAACCTCGAGAGTAAT 2146
Query 64408 GGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| || || || | ||| || || |||||||||||
Sbjct 2145 TGTTTTTCCAGTAAGAGTCTTCACAAAAATTTGCAT 2110
Score = 86.0 bits (94), Expect = 6e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294
|| ||||||| || || ||||| || ||||||||||| || | || | | ||||||
Sbjct 2774 ACCAGATGAAGAGTAGACTCTTTCTGGATGTTGTAATCGGCAAGTGTCCTACCATCTTCA 2715
Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354
|||||||| || ||| | || | ||||| || || ||||| || || || || || ||
Sbjct 2714 AGCTGCTTCCCAGCAAAGATCAAACGCTGTTGATCAGGAGGGATGCCCTCCTTATCCTGA 2655
Query 64355 ATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTG 64414
|| || ||| ||| || | ||| || || || || | || | |||||
Sbjct 2654 ATCTTGGCCTTAACATTGTCAATTGTGTCTGAACTTTCAACCTCCAAGGTAATCGTCTTT 2595
Query 64415 CCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
|| |||||||| || ||||| || ||||||
Sbjct 2594 CCTGTCAAAGTCTTCACGAAGATCTGCATT 2565
>seq502676
Length=6550
Score = 127 bits (140), Expect = 2e-24
Identities = 167/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || |||| ||||| || ||||| | ||||| || ||||||| ||||||||||||
Sbjct 1304 ACCACCACGCAGCCTAAGGACAAGATGCAAAGTCGACTCCTTTTGAACGTTGTAATCTGC 1245
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || | | ||||||| | || ||||| ||| | || |||| |||||| || || ||
Sbjct 1244 CAGAGTCCTCCCGTCTTCCAATTGTTTGCCTGCAAATATCAGCCTCTGCTGATCTGGTGG 1185
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394
||| |||||||| ||||| | |||| ||||| || || | ||| || | || |
Sbjct 1184 AATGCCTTCTTTGTCTTG-AATTTTGGCTTTCACGTTATCAATTGTGTCGGAGCTCTCAA 1126
Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||| | ||| | || || ||||||| ||||| || ||||| |||||
Sbjct 1125 CTTCCAGAGTAATTGTTTTACCGGTCAGGGTTTTGACAAAAATCTGCAT 1077
Score = 125 bits (138), Expect = 7e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|||||||| | | ||| || || || | ||| || || || || || || ||||| |||
Sbjct 619 CCGCCGCGTAGACGAAGGACGAGGTGGAGCGTGGACTCCTTCTGTATATTATAATCGGCG 560
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| ||| || | || || |||||||||||||| | ||||| |||||||| ||||| |||
Sbjct 559 AGGGTCCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCGGGGGGA 500
Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396
|| ||||| || || || || || ||| ||| || | ||||| | || |||
Sbjct 499 ATACCTTCCTTATCCTGGATCTTGGCCTTGACATTATCTATGGTATCGGAGCTCTCGACT 440
Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | ||| | |||||||||||| | ||||| ||||| || |||||
Sbjct 439 TCGAGAGTAATGGTCTTGCCGGTTAGGGTTTTGACGAAGATCTGCAT 393
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|||||||| | || || ||||| |||| |||||||| || |||||||||||||| ||
Sbjct 1075 CCGCCGCGGAGCCTGAGGACTAGGTGAAGAGTCGATTCCTTCTGAATGTTGTAATCGGCT 1016
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| ||| | | || || || || || || || |||| | ||||||||| |||||||||
Sbjct 1015 AGGGTTCTACCATCCTCCAGTTGTTTCCCAGCGAAAATCAACCGCTGCTGATCGGGAGGA 956
Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| ||||| || ||||| | |||| ||||| ||| || | |||||| || ||
Sbjct 955 ATACCTTCCTTGTCTTG-AATTTTGGCTTTGACATTGTCGATCGTATCAGAACTCTCAAC 897
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | ||| | || |||||||| | ||| || || || || |||||
Sbjct 896 CTCCAGAGTGATCGTTTTGCCGGTAAGAGTCTTGACAAAGATCTGCAT 849
Score = 107 bits (118), Expect = 2e-18
Identities = 153/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || ||||| | || || || ||||| ||||| ||||| || | || || | ||
Sbjct 1516 AGAACCAGATGCAGAGTAGACTCCTTTTGGATGTTATAATCAGCCAGAGTACGGCCATCC 1457
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|||||||||||||| ||| | || |||| ||| || ||||| || || |||||||| ||
Sbjct 1456 TCAAGCTGCTTGCCAGCAAATATAAGCCTCTGTTGATCGGGTGGGATACCTTCTTTATCC 1397
Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|||| | |||||||| ||| || | ||| ||| |||||||| | ||| | |||
Sbjct 1396 TGTA-TCTTTGCTTTGACATTATCAATTGTGTCAGAACTCTCCACTTCAAGAGTGATGGT 1338
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| || |||| || || || || || |||||
Sbjct 1337 TTTTCCAGTCAGTGTCTTGACAAATATCTGCAT 1305
>seq5020
Length=1186
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|||||||| | | ||| |||||||| | || ||||| || |||||||||||||| ||
Sbjct 1037 CCGCCGCGTAGGCGAAGGACTAGATGCAGTGTTGATTCCTTCTGAATGTTGTAATCCGCT 978
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| || | |||| || |||||||| |||||| | ||||| |||||||| || |||||
Sbjct 977 AAAGTCCTGCCGTCCTCCAGCTGCTTCCCGGCAAAGATGAGGCGCTGCTGATCCGGAGGG 918
Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396
|| ||||| || || || || || ||| ||| || | || || | || |||
Sbjct 917 ATCCCTTCCTTGTCCTGAATCTTGGCCTTGACATTGTCGATGGTGTCGGAGCTTTCGACT 858
Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
|| | ||| | ||| |||||||| | ||||| ||||| || ||||||
Sbjct 857 TCGAGAGTGATGGTTTTGCCGGTTAGGGTTTTGACGAAGATCTGCATT 810
>seq731700
Length=3081
Score = 122 bits (134), Expect = 9e-23
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || ||||| | || ||||| || |||||||||||||| |||| |||||| | ||
Sbjct 1358 AGGACCAGATGGAGAGTGGATTCCTTCTGAATGTTGTAATCAGCGAGGGTGCGGCCATCC 1299
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||| |||||||| | ||||||| |||||||| || ||||| ||||| || ||
Sbjct 1298 TCGAGCTGTTTGCCGGCGAAGATGAGCCTTTGCTGGTCTGGGGGAATCCCTTCCTTGTCC 1239
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| || || | |||||| | ||||| || | || | ||||
Sbjct 1238 TGAATCTTAGACTTAACGTTGTCGATTGTATCGGAGCTCTCCACCTCGAGGGTGATGGTC 1179
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||||||| | || || ||||| || |||||
Sbjct 1178 TTGCCGGTGAGGGTCTTAACGAAGATCTGCAT 1147
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || |||| ||||| || | || | || ||||| || || |||||||| || ||
Sbjct 2058 ACCACCACGCAGCCTAAGGACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGC 1999
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| |||||| | || ||||||||||| || ||| | || |||| ||||||||| || ||
Sbjct 1998 CAAGGTGCGGCCATCCTCAAGCTGCTTCCCAGCAAAGATCAGCCTCTGCTGGTCCGGTGG 1939
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||| ||||| || || || || || ||| ||| || | || || |||||
Sbjct 1938 AATACCTTCCTTGTCCTGGATCTTGGCCTTGACATTATCAATGGTGTCCGAACTCTCCAC 1879
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||| | || | |||||| || |||| || || || |||||||||||
Sbjct 1878 TTCCAGGGTAATGGTCTTCCCTGTCAGGGTCTTGACAAAAATTTGCAT 1831
Score = 82.4 bits (90), Expect = 8e-11
Identities = 139/199 (70%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || ||||||||||||||||| || | ||| || | || || ||||| || ||
Sbjct 1571 GTGGACTCCTTTTGAATGTTGTAATCAGCAAGGGTACGGCCATCCTCGAGCTGTTTCCCA 1512
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
|| | || |||| ||| ||||| || || ||||| || || || || | | || |||||
Sbjct 1511 GCGAAGATCAGCCTCTGTTGGTCCGGTGGGATTCCCTCCTTGTCCTGGA-TCTTGGCTTT 1453
Query 64367 -ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425
|| || | |||||| | ||||| || | || | |||||| || || | ||
Sbjct 1452 AACGTTGTCAATTGTATCTGAGCTTTCCACCTCAAGGGTAATGGTCTTCCCTGTGAGGGT 1393
Query 64426 TTTTACGAAAATTTGCATT 64444
||| || || || ||||||
Sbjct 1392 TTTGACAAAGATCTGCATT 1374
>seq621678
Length=9740
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| ||||||| || || || | ||| | || || || ||||||||||||||||| ||
Sbjct 536 ACCACCGCGCAGCCTTAGGACCAAATGCAAAGTGGACTCCTTTTGAATGTTGTAATCCGC 595
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || | | ||||| | || ||||| ||| | || |||| |||||| || || ||
Sbjct 596 CAAAGTCCTTCCATCTTCCAATTGTTTGCCTGCAAAGATAAGCCTCTGCTGATCCGGTGG 655
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|||||||||||| || || ||||| ||||| || | ||| || | || ||
Sbjct 656 AATTCCTTCTTTGTCCTGAATTTTGGCTTTTACGTTATCAATTGTGTCGGAGCTCTCAAC 715
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||| | || || || ||||| || | ||||| |||||||| |||||
Sbjct 716 TTCCAGCGTAACTGTTTTGCCAGTTAGGGTTTTGACGAAAATCTGCAT 763
Score = 100 bits (110), Expect = 3e-16
Identities = 152/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| || | ||| | || || || ||||||| ||||||||| || | ||| || | ||
Sbjct 323 AAGAACCAAATGCAGAGTGGACTCCTTTTGAACGTTGTAATCAGCAAGGGTTCGTCCATC 382
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
|| ||||||||||| ||| | || |||| ||| || || || || || || ||||| ||
Sbjct 383 CTCGAGCTGCTTGCCCGCAAATATCAGCCTCTGTTGATCTGGTGGGATGCCCTCTTTGTC 442
Query 64351 TTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGG 64409
|| | | |||||||| ||| || | || ||| | ||||| || | ||| | ||
Sbjct 443 CTG-AATCTTTGCTTTGACATTATCAATAGTGTCAGAGCTCTCCACCTCCAGAGTAATGG 501
Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
| || || ||||| ||||| || || || |||||
Sbjct 502 TTTTTCCAGTCAATGTTTTCACAAATATCTGCAT 535
>seq553100
Length=2664
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
||||| | ||| || | || | ||| | || || ||||| |||| |||||||||||
Sbjct 881 CCGCCTCTCAACCTCAAAACCAAATGTAGAGTGGAATCTTTCTGAACATTGTAATCTGCC 822
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| || | | | | ||| |||||||| |||||| | || || |||||||| | | ||||
Sbjct 821 AGAGTCCTCCCATTTTCGAGCTGCTTACCGGCAAATATCAGGCGCTGCTGTTTGTTAGGA 762
Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396
|| ||||| || || || || || ||| || || |||| || ||||||
Sbjct 761 ATGCCTTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGACTGCGTCTGAACTGTCCACC 702
Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
|||| || | ||| || || ||||| ||||| ||||| || ||||||
Sbjct 701 TCTAGGGTAATGGTTTTTCCAGTCAAGGTTTTGACGAAGATCTGCATT 654
>seq384027
Length=1641
Score = 100 bits (110), Expect = 3e-16
Identities = 108/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|| ||||| | | ||| || || || | |||||| || || || |||||||| |||||
Sbjct 183 CCACCGCGGAGCCGAAGGACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCTGCC 124
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| |||||| | || || |||||||| ||||| |||| || ||||||||||| || ||
Sbjct 123 AGCGTGCGCCCATCCTCCAGCTGCTTCCCGGCGAAAATCAGACGCTGCTGGTCCGGGGGG 64
Query 64337 ATTCCTTCTTTTTCTTGTATTTT 64359
|||||||| || || || || ||
Sbjct 63 ATTCCTTCCTTGTCCTGGATCTT 41
>seq232199
Length=432
Score = 96.9 bits (106), Expect = 3e-15
Identities = 107/143 (75%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|||||||| | | ||| || || || | ||| ||||| || || || || | || |||
Sbjct 325 CCGCCGCGAAGACGAAGAACGAGGTGGAGCGTGGATTCCTTCTGGATATTATGGTCGGCG 266
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| ||| || |||| || |||||||||||||| | |||| |||||||| ||||| |||
Sbjct 265 AGGGTCCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGGTGAGACGCTGCTGATCGGGTGGA 206
Query 64337 ATTCCTTCTTTTTCTTGTATTTT 64359
|| ||||| || ||||| || ||
Sbjct 205 ATACCTTCCTTGTCTTGGATCTT 183
>seq659339
Length=4894
Score = 91.5 bits (100), Expect = 1e-13
Identities = 150/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| || ||||| | || || || |||||||| || |||||||| | || || ||||
Sbjct 275 AAGAACCAGATGCAGAGTGGAGTCCTTTTGAATTTTATAATCTGCAAGAGTTCGTCCGTC 216
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
|||||||||||||| ||| | || |||| || || || || || || ||||| ||
Sbjct 215 CTCAAGCTGCTTGCCAGCAAATATCAGCCTCTATTGATCTGGTGGGATGTACTCTTTGTC 156
Query 64351 TTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGG 64409
|| | |||||||| ||| || | ||| ||| | |||| || | ||| | ||
Sbjct 155 CTG-AACCTTTGCTTTGACATTATCAATTGTGTCAGAGCTCCCCACCTCCAGAGTAATGG 97
Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
| || |||||||| |||| || || || |||||
Sbjct 96 TTTTACCGGTCAATATTTTCACAAATATCTGCAT 63
>seq690132
Length=1697
Score = 82.4 bits (90), Expect = 8e-11
Identities = 152/219 (69%), Gaps = 7/219 (3%)
Strand=Plus/Minus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCG---CG- 64286
||| || ||||| | || || || ||||||||||| |||||||| | || || ||
Sbjct 1280 AAGAACCAGATGCAGAGTGGAGTCCTTTTGAATGTTATAATCTGCAAGAGTTCGTTTCGT 1221
Query 64287 -CGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCT 64345
| || |||||||||||||| ||| | || |||| || || || || || || | |||
Sbjct 1220 CCTTCCTCAAGCTGCTTGCCAGCAAATATCAGCCTCTATTGATCTGGTGGGATGCACTCT 1161
Query 64346 TTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGT 64404
|| || || | |||||||| ||| || | ||| ||| | |||| || | |||
Sbjct 1160 TTATCCTG-AGCCTTTGCTTTGACATTATCAATTGTGTCAGAGCTCCCCACCTCCAGAGT 1102
Query 64405 TACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
| ||| || |||||||| || | || || || |||||
Sbjct 1101 AATGGTTTTACCGGTCAATATTATCACAAATATCTGCAT 1063
>seq588422
Length=1254
Score = 82.4 bits (90), Expect = 8e-11
Identities = 86/113 (76%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| ||||| || || |||||||| || |||| |||||| |||| || || |||||||||
Sbjct 90 GTTGATTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCGAGTTGCTTGCCG 149
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTT 64359
|| | || |||| ||||||||| || || || || || || || || || ||
Sbjct 150 GCGAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTT 202
>seq564812
Length=421
Score = 82.4 bits (90), Expect = 8e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| ||| ||| || || || | ||| | || || || ||||||||||||||| ||
Sbjct 266 ACCACCGGGCATCCTTAGGACCAAATGCAAAGTGGACTCCTTTTGAATGTTGTAAGACGC 207
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || | | |||| | | ||||| ||| | ||||||| |||||| || || ||
Sbjct 206 CAAAGTCCTTCCAACTTCCAATTATTTGCCTGCAAAGATGAGCCTCTGCTGATCCGGTGG 147
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||| |||||||| || | ||||| |||||| || | ||| || | || ||
Sbjct 146 AATCCCTTCTTTGTCCTCAATTTTGGCTTTTACATTATCAATTGTGTCGGAGCTCTCAAC 87
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||| | || | || | ||| || | |||||| |||||||| |||||
Sbjct 86 TTCCAGCGTAATTGTTTGGCCAGTAAGAGTTTTGACGAAAATCTGCAT 39
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494684026638720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |