Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ruellia_20speciosa_20[genbank_20GCA_5F001909325.1_202016-12-20] 794,288 sequences; 740,035,655 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq548568 98.7 1e-15 >seq548568 Length=13427 Score = 98.7 bits (108), Expect = 1e-15 Identities = 133/183 (73%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 94993 CAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAA 95052 ||||| ||| |||| || | ||||| |||||||| |||| || | || ||||| Sbjct 6742 CAGGGAATTCTTCAACCTGATATGTGGGGCGTGAAGCCATCGGATCGATGGGATTGGGAT 6801 Query 95053 GCTCTACGCGCTGATGTTATCAAACAC-GGTGTGAAAAACGCGCTGCTTGTGGCCCCCAT 95111 ||||| || ||| ||| ||||||| | || || | ||| |||| || | || ||||| Sbjct 6802 GCTCTTCGAGCT-ATGATATCAAAGAATGGAGTCAGAAATTCGCTCCTCATAGCACCCAT 6860 Query 95112 GCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTC 95171 |||||| || || ||| ||||| ||||| |||||||| | || || || | |||||| Sbjct 6861 GCCCACTGCTTCAACGAGCCAGATTCTTGGAAACAACGAATGCTTTGAGCCATACACCTC 6920 Query 95172 CAA 95174 ||| Sbjct 6921 CAA 6923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 489811291236480