Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ruellia_20speciosa_20[genbank_20GCA_5F001909325.1_202016-12-20] 794,288 sequences; 740,035,655 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq794097 87.8 3e-12 >seq794097 Length=14469 Score = 87.8 bits (96), Expect = 3e-12 Identities = 267/407 (66%), Gaps = 7/407 (2%) Strand=Plus/Plus Query 159650 TTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTTC 159709 ||||| || || |||||||| |||| || | || | ||||| | | || |||||| Sbjct 11721 TTCTCAAAGAAATTGGTCTTCCCCTGCAGGCTAATCAACTCCATCCAATCAAACGGGTTC 11780 Query 159710 TTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTCG 159769 | ||| | || |||| | || | ||| |||| || || || ||||| ||||| Sbjct 11781 TGCACATTGTACATCTTCCCGTACCCCAACGCCCCCAGTAATCTATCCGCCACGAATTCT 11840 Query 159770 ATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGC-CTAACGGGGAGCGCTTCCGA 159828 || || | |||| || | ||| ||||||| || | |||| ||||| || | Sbjct 11841 ATATACTGCCTCATCAATTCTCCGTTCATCCCCACCAATGCGCACGGC-AGCGCCTCGCA 11899 Query 159829 CAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTCGTACCC 159888 || || ||| | || || || || || || | ||| ||| | || | || | | Sbjct 11900 CACGAATTCCCTTTCTATATCCACGGCATCCGCCACCATCCCCTTCACTCTCTCCTCGCT 11959 Query 159889 CGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTC 159948 | |||| | | || | |||| |||||||| ||||||||||||| ||||| Sbjct 11960 CAGCTTCTTCTTCAGCAGGCTGT---ACAGCAGGCACGCGAAGTCGCAGTGCAAACCCTC 12016 Query 159949 GTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTTGAG 160008 ||||| || || || |||||||| | | | || ||||| | ||| ||| || || Sbjct 12017 ATCCCGCGATATCAATTCGTTGGAGAACGTCAACCCGGGCATCAACCCGCGCTTCTTAAG 12076 Query 160009 CCAAAAAATGGCCGCAAAAGC-ACCGCTAAAAAAGATCCCCTCCACG 160054 ||| || || | |||| |||| ||| || || |||||||||||| Sbjct 12077 CCAGAATATTG-CGCAGAAGCTTCCGGAGAAGAATATCCCCTCCACG 12122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 787260422081280