Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ruellia_20speciosa_20[genbank_20GCA_5F001909325.1_202016-12-20] 794,288 sequences; 740,035,655 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq743637 253 2e-61 seq370774 210 2e-48 seq547733 172 4e-37 seq488774 156 3e-32 seq579699 150 1e-30 seq483499 129 4e-24 seq339340 109 4e-18 seq567771 107 1e-17 seq392475 105 5e-17 seq650005 104 2e-16 seq733272 100 2e-15 seq663505 98.7 7e-15 seq335363 96.9 3e-14 >seq743637 Length=3343 Score = 253 bits (280), Expect = 2e-61 Identities = 766/1164 (66%), Gaps = 27/1164 (2%) Strand=Plus/Plus Query 517253 TCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGA 517312 ||||||| || || || ||||||||||||||||| | ||||| ||| || || Sbjct 1064 TCAGCGG-AG--ACGTTCAGAATACCATTGGCATCAATGTCAAAGCACACTGTGATCTGG 1120 Query 517313 GGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTA 517372 || || ||||| ||||||| ||||| || | | ||| |||| || || || Sbjct 1121 GGAACTCCTCTGGGAGCAGGAGGGATGCCGGATAGCTCAAACTTTCCAAGCAAGTTGTTG 1180 Query 517373 TCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCT 517432 ||| | || ||| ||| || || | | || || || ||| ||| || || Sbjct 1181 TCTCTGGTTCGGGTTCTTTCTCCTTCATAGACCTGAATCAGGACACCAGGTTGGTTGTCG 1240 Query 517433 GAATAAGTTGTAAATACTCTGGATTTTTTACA-AGGAATTGTTGTGTTTCTATCAAT-AA 517490 ||||| || | || || ||| || | | ||| || ||||| || || ||| || Sbjct 1241 GAATACGTAGAGAAGAC-CTGCTCCTTCTTCGTAGGGATAGTTGTATTCCTGGGAATCAA 1299 Query 517491 TATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTA 517550 || | |||| | |||||| || ||||| | |||||| || || ||||||||||||| | Sbjct 1300 TACAG-TCATGACACCACCAGCAGTTTCCAGACCAAGGGAGAGTGGAGTGACATCAAGAA 1358 Query 517551 GGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAG 517610 | | | || |||| || |||| | ||| | |||||| ||||||| ||| | Sbjct 1359 GCAAGAGATCCTGAACCTTCTCATTGCCCTCACCGCTCAAAATAGCAGCTTGAACAGCGG 1418 Query 517611 CACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAA 517670 | |||||||||||||||||||| || || | | | | || | ||||||||||| | Sbjct 1419 CGCCATATGCAACAGCTTCATCGGGGTTGATACTCTTGCAAAGCTCCTTACCATTGAAGA 1478 Query 517671 AAT-TTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATT 517729 | | ||| || || |||| ||||| ||||| | | || || ||||| | ||||| Sbjct 1479 AGTCTTGCAACAA-TTGTTGGACCTTGGGAATCCTGGTCGAGCCACCAACAAGTACAACA 1537 Query 517730 TCATGCACCTGTGAT-TTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAG 517788 ||||| | | ||| | || |||| |||| |||| ||| || ||||| || || | Sbjct 1538 TCATGTA-CAGTGCTCTTGTCCATCTTTGCATCCCTCAAACACTTCTCAACTGGCTCCAT 1596 Query 517789 ACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATT 517848 || | || ||||| || ||| || || || | || | |||| ||| || Sbjct 1597 ACACTTCCTGAACAAATCCATGTTAAGCTCCTCAAACCTGGCACGTGTAATTGTGGAATA 1656 Query 517849 ATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTG---AGTCGAAGAAGA 517905 | ||||||| || || | | |||||||| ||||| || ||||| ||| |||| ||| Sbjct 1657 AAAATCAATACCCTCATAAAGAGAATCAATCTCAATGGTTGTTTGGGCAGTGGAAG-AGA 1715 Query 517906 TAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG 517965 ||| | | || || | ||||| || || || | ||| | || || | | | ||| Sbjct 1716 GAGTCCTC--TTTGCCCTCTCACAAGCAGTTCTCAATCTCCTCAACGCCCT--CGGGTTG 1771 Query 517966 --ATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGA 518023 | | | ||| | || | || || || || || | ||| | | || | | | Sbjct 1772 CCACTGATGTCTTTCTTGTTCTTCCTTTTAAATTCCTGGACAAAGTGGTTCACCATTCTA 1831 Query 518024 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 518083 || ||||||||||||||||| | | ||||| || | || || | |||| ||| | Sbjct 1832 TTGTCAAAATCTTCACCTCCAAGGTGAGTATCACCAGCAGTGGCCTTAACTTCGAAGATA 1891 Query 518084 CCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGT 518143 || || |||| | ||| |||| |||||| || |||||||| | ||||||||| | Sbjct 1892 CCCTCCTCAATTGTCAAGAGAGAAACATCAAAAGTACCACCACCGAGATCAAAAATCAAA 1951 Query 518144 ACATTCATTTC----TTTGTCTTGG--TTTTTATCAAGACCATACGCAAAAGCAGCAGCA 518197 |||||| | || || | | || || ||||||||||| |||| |||||||| Sbjct 1952 ACATTCTTCTCACCAACACTCGTAGCTTTCTTGTCAAGACCATATGCAATTGCAGCAGCT 2011 Query 518198 GTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTG 518257 || || ||||| || || | || ||||| ||||| | ||| || ||||| ||||| Sbjct 2012 GTGGGCTCATTGATGATACGCATCACATTCAGACCTGAAATGACCCCAGCATCCTTAGTA 2071 Query 518258 GCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCT 518317 ||||| | || || || ||||| || ||||| ||||| | || |||| ||| | Sbjct 2072 GCTTGACGCTGAGAGTCATTAAAGTAAGCAGGCACAGTGACCACAGCATTCTTTATTGTC 2131 Query 518318 TTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGT 518377 ||| | || || ||| ||| ||||| || | |||| ||| || || |||| Sbjct 2132 GAACCCAGGTATGCCTCTGCAATTTCCTTCATCTTCATCAAAACCATGGACGAGATTTCC 2191 Query 518378 TCTGGGGAATATTGCTTGGATTCA 518401 || | ||| |||| ||| |||| Sbjct 2192 TCGGCTGAAAATTGTTTGTCTTCA 2215 >seq370774 Length=10529 Score = 210 bits (232), Expect = 2e-48 Identities = 802/1247 (64%), Gaps = 24/1247 (2%) Strand=Plus/Plus Query 517163 GCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTATTAGTAATA 517222 ||||| || ||| ||||||||| ||| | |||| ||| || | ||| || || Sbjct 5484 GCTTCCTGAACCATCTTCTCAATTTCATCCTTTGAGAGTCTACCCTTGTCATTGGTGATG 5543 Query 517223 GTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTG 517282 || || || || || || | || || | |||| |||||| || |||||||| Sbjct 5544 GTGATCTTGTTCTTTTGCCCCGTGGTCTTGTCCTCAGCAGACACATTCAGGATACCATTC 5603 Query 517283 GCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCT 517342 ||||| | ||||| ||| ||| || ||||| || || ||||||| ||||| || Sbjct 5604 GCATCAATGTCAAAACAGACAGTAATCTGGGGGACACCCCTGGGAGCAGGAGGGATTCCA 5663 Query 517343 TCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAA 517402 | | ||| | || || ||| || || | || | ||| || || || | Sbjct 5664 GAAAGCTCAAACTTGCCGAGCAAATTGTTGTCCCTTGTCCTTGTTCTCTCCCCTTCATAC 5723 Query 517403 ATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGGATTTT-TT 517461 | ||||| || | | || || || || || || | ||||| ||| || || Sbjct 5724 ACCTGGATGAGCACACCCGGCTGGTTGTCAGAGTAGGTAGAGAATAC-CTGCTCCTTCTT 5782 Query 517462 ACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCTGTTTCTAA 517521 ||| || || ||||||||| || | | ||||| | |||||| || ||||| | Sbjct 5783 GGTAGGGATAGTGGTGTTTCTAGGGATCAAAACAGTCATGACACCACCAGCAGTTTCCAG 5842 Query 517522 ACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTG 517581 ||| || || ||||| |||||||||| || | | || |||| || |||| | Sbjct 5843 ACCTAGGGAGAGAGGGGTGACATCAAGAAGCAAGAGATCCTGAACCTTCTCATTGCCCTC 5902 Query 517582 ACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAA- 517640 |||| | |||||| || |||| ||||||||||||||| ||||| |||||||| || | Sbjct 5903 ACCACTCAAAATAGCAGCCTGAACAGCAGCACCATATGCCACAGCCTCATCAGGGTTGAT 5962 Query 517641 -CAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTACCTTAGGA 517699 | || || || | || |||||||| || | | || | || ||||| ||| Sbjct 5963 GCTCTTGCA--AAGCTCCTTCCCATTGAAGAAGTCTTGCAGCAACTGCTGGACCTTGGGA 6020 Query 517700 ATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGAT-TTATCCAGTTTTGA 517758 || | || ||| || || || | |||| ||||| | | ||| | || |||| || | Sbjct 6021 ATTCTAGTTGAACCACCGACAAGGACAACATCATGGA-CAGTGCTCTTGTCCATCTTAGC 6079 Query 517759 ATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTC 517818 ||| ||| || || || ||||| | | ||| ||||| || || || Sbjct 6080 ATCTCTCAAACACTTCTCCACAGGTTCCATGCATTTTCTGAACAAATCCATGTTGAGCTC 6139 Query 517819 TTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAATCAAC 517878 ||||| | || | ||||| |||| | ||||||| || || | | |||||||| Sbjct 6140 CTCGAACCTCGCACGAGTAATAGTGGAGTAGAAATCAATACCCTCATAGAGAGAATCAAT 6199 Query 517879 TTCAATCGTAGTTTG---AGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGT 517935 ||||| || ||||| ||| | || ||| ||| | | || || | ||||| || || Sbjct 6200 CTCAATTGTTGTTTGGGCAGT-GGAGGAGAGAGTCCTC--TTTGCCCTCTCACAGGCAGT 6256 Query 517936 CCTTAGTCTTCGTAAGGCTTTTGCTGATTG--ATTCAAATCTGTTTTATATTTTCTCTTG 517993 ||| | ||| | || || ||| | ||| | | | ||| | || | || ||||| Sbjct 6257 CCTCAATCTCCTCAATGCCCTTG--GGTTGCCAGTGATGTCTTTCTTGTTCTTCCTCTTA 6314 Query 517994 AAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTA 518053 || || | |||| | | || | || || ||||| |||||||| || | | || Sbjct 6315 AATTCCTGAACAAAGTGGTTCACCATGCGGTTGTCAAAGTCTTCACCACCAAGATGGGTG 6374 Query 518054 TTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCA 518113 | || | || || | || | || | || || |||| | |||||||| |||||| Sbjct 6375 TCACCAGCAGTGGCCTTCACCTCAAAGATACCCTCCTCAATGGTCAAAAGAGAGACATCA 6434 Query 518114 TGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTT------CTTTGTCTTGGTTT 518167 || |||||||| | |||||| || | |||||| | | | || | || Sbjct 6435 AAAGTACCACCACCGAGATCAAAGATCAAGACATTCTTCTCACCAACACTGGTTGCCTTC 6494 Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227 || ||||||||||| |||| ||| ||||| || || ||||| ||||| | || |||||| Sbjct 6495 TTGTCAAGACCATAAGCAATAGCTGCAGCTGTAGGCTCATTGATAATACGCAGCACATTA 6554 Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287 | |||||||| || ||||| || || ||||| | ||| || || || || || || Sbjct 6555 ATGCCAGCAATCACACCAGCATCCTTGGTAGCTTGACGTTGGGAGTCATTGAAGTACGCT 6614 Query 518288 GGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTC 518347 || ||||| | || || | | || || ||||| || || || ||| || Sbjct 6615 GGGACAGTGACCACAGCGTTCTTCACAGCTGAACCAAGGTATGCCTCCGCAATTTCCCTC 6674 Query 518348 ATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTT 518394 ||||| | | || ||| || || |||| ||||| | | ||||||| Sbjct 6675 ATTTTCATCAGAACCATAGAAGAGATTTCTTCTGCAGCAAATTGCTT 6721 >seq547733 Length=2727 Score = 172 bits (190), Expect = 4e-37 Identities = 676/1056 (64%), Gaps = 24/1056 (2%) Strand=Plus/Minus Query 517264 CACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCT 517323 |||||| || ||||| |||||||| | || || ||| | || ||||| || || || Sbjct 1554 CACATTCAGGATACCGTTGGCATCAATGTCGAAACAGACATTGATCTGAGGTACTCCCCT 1495 Query 517324 CTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAA 517383 |||| || ||||| || | | |||| | || || || ||||| || Sbjct 1494 GGGAGCTGGAGGGATGCCCGTGAGCTCAAATTTCCCAAGCAGGTTGTTATCCCGTGTCCT 1435 Query 517384 TTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGT 517443 ||| ||||||||| | | || || ||| ||| ||||| || ||||| || | Sbjct 1434 GGTTCTTTCACCCTCATACACCTGAATCAACACTCCAGGCTGATTGTCCGAATAGGTCGA 1375 Query 517444 AAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCT----ATCAATAATATTGGTCA 517499 || | | || || |||||| || ||||| | ||||| | ||||| Sbjct 1374 GAAGATTTGCTCCTTCTTTGTAGGAATGGTGGTGTTCCGCGGGATCAACAC----GGTCA 1319 Query 517500 TAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT 517559 | | ||| || || || || ||||| ||||| | ||| || ||||| | |||| || | Sbjct 1318 TGACACCTCCAGCAGTCTCCAAACCGAGAGACAAAGGCGTAACATCGAGGAGGAGAAGGT 1259 Query 517560 TTTGAAGTTTTTCATCAGTTTGACCAA-CAAGAATAGCTGCTTGAATAGCAGCACCATAT 517618 || | ||| |||| || ||| ||||| | || ||||||| ||||||||||| Sbjct 1258 CCTGCACTTTCTCATTCCCTTCACCGCTCAAGATT-GCAGCTTGAACCGCAGCACCATAC 1200 Query 517619 GCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAA 517678 || || || ||||||||||| | | | | || | || ||||| || |||| | Sbjct 1199 GCCACGGCCTCATCAGGATTGATACTCTTGCAGAGCTCCTTGCCATTAAAGAAATCTTGC 1140 Query 517679 AGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACC 517738 || | |||| ||||| ||||| | | || || ||||| | || | ||||| || Sbjct 1139 AGCAATTGTTGCACCTTTGGAATCCTCGTCGACCCACCAACGAGGACGACATCATGGACA 1080 Query 517739 TGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTA 517798 |||||||| |||| |||| || || || || || || | | | || Sbjct 1079 GCACTTTTATCCATCTTTGCATCCCTCAAGCACTTCTCCACAGGCTCCATGCACTTCCTG 1020 Query 517799 AACAAGTC--TGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAA 517856 ||||| || || ||| || ||||| | || | ||||| || || |||| | Sbjct 1019 AACAAATCCATGTTCAA--CTCCTCGAACCTCGCACGAGTAATGGTCGAATAGAAATCTA 962 Query 517857 TTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTT 517916 |||| ||| | |||||||| | |||||| || || || | | ||| || || | | | Sbjct 961 TTCCCTCGTATAAAGAATCGATTTCAATGGTGGTCTGTGCAGTAGACGAGAGAGTTCTCT 902 Query 517917 TAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATT--GATTCAAATC 517974 | || | ||||| || || || | ||| | || ||| | | |||| | | | ||| Sbjct 901 TTGCCCTCTCACAAGCAGTTCTCAATCTCCTCAAAGCTCTGG--GATTCCCACTGATATC 844 Query 517975 TGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATC 518034 | |||| || |||||||| || | || | | || | ||| || || ||||| Sbjct 843 CTTCTTATTCTTCCTCTTGAATTCCTGTACGAAGTGGTTCACCATACGGTTGTCGAAATC 784 Query 518035 TTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAG 518094 ||||||||| | | |||| ||| | || ||| | |||| || | ||| ||||||| Sbjct 783 TTCACCTCCGAGATGGGTATCTCCGGCTGTTGCTTTCACTTCAAAGATTCCTTCTTCAAT 724 Query 518095 AGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTC 518154 | | || | |||||| || || ||||| | ||||||||| || |||||| | || Sbjct 723 GGTGAGGAGTGAGACATCAAATGTGCCTCCACCAAGATCAAAAATCAGCACATTCTTCTC 664 Query 518155 ------TTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATT 518208 || | || || |||||||| || || | || || || || |||||||| Sbjct 663 GCCGGAGGTGCCGGCTTTCTTGTCAAGACCGTAAGCGATGGCGGCGGCGGTAGGTTCATT 604 Query 518209 AATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTG 518268 || || | || ||||| || || | || || || || || ||||| || | || Sbjct 603 GATGATGCGCATGACATTGAGGCCGGATATGACGCCGGCGTCCTTGGTGGCCTGGCGCTG 544 Query 518269 TGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 518304 |||||||| || || || ||||| || | ||||| Sbjct 543 GGAATCGTTGAAGTAGGCGGGAACTGTTACGACGGC 508 >seq488774 Length=10034 Score = 156 bits (172), Expect = 3e-32 Identities = 608/944 (64%), Gaps = 24/944 (3%) Strand=Plus/Minus Query 517466 GGAATTGTTGTGTTTCT----ATCAATAATATTGGTCATAATACCACCTGCTGTTTCTAA 517521 ||||| || |||||||| ||||| | ||||||| ||||| |||||||| || Sbjct 5223 GGAATGGTGGTGTTTCTTGGGATCAAGACA----GTCATAACTCCACCAGCTGTTTCCAA 5168 Query 517522 ACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTG 517581 ||||| ||||| ||||||||||||| || | | || || | || |||| | Sbjct 5167 CCCAAGGGAAAGGGGAGTGACATCAAGAAGCAAGAGATCCTGGACCTTCTCATTGCCCTC 5108 Query 517582 ACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAA- 517640 ||| | ||| || ||||| | |||||||||||| |||||||| ||||| || || | Sbjct 5107 ACCGCTCAAAATGGCAGCTTGGACAGCAGCACCATAGGCAACAGCCTCATCGGGGTTGAT 5048 Query 517641 -CAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTACCTTAGGA 517699 | || || || | || |||||||| || | ||| | |||| ||||| ||| Sbjct 5047 GCTCTTGCA--AAGCTCCTTGCCATTGAAGAAGTCCTGAAGCAATTGTTGAACCTTGGGA 4990 Query 517700 ATACGAGATGATCCTCCAACTAATACAATTTCATGCA-CCTGTGATTTATCCAGTTTTGA 517758 || | | || || ||||| | |||| ||||| | ||| || |||| || | Sbjct 4989 ATCCTGGTGGAGCCACCAACAAGCACAACATCATGAATACTG-CTCTTGTCCATCTTAGC 4931 Query 517759 ATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTC 517818 ||| ||| || ||||| ||||| | || || || | ||| || || Sbjct 4930 ATCTCTCAAACACTTCTCAACAGGTTCCATACATTTCCTGAAAAGGTCCATGTTGAGCTC 4871 Query 517819 TTCGAATTTAGCTCTAGTAAGAGTGACATTATAA-TCAATTCCTTCGAACAAAGAATCAA 517877 ||||| | || | ||| | ||| | || || ||||| || || | | ||| |||| Sbjct 4870 CTCGAACCTGGCACGAGTGATGGTG-GAGTAGAAGTCAATGCCCTCATAGAGAGAGTCAA 4812 Query 517878 CTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCC 517937 |||||| || ||||| | | ||| || || | | || || | ||||| ||||| | Sbjct 4811 TTTCAATGGTCGTTTGGGCAGTAGATGACAGCGTCCTCTTTGCCCTCTCACAAGCTGTTC 4752 Query 517938 TTAGTCTTC-GTAAGGCTTTTGCTGATTGATTCAAATCTGTTTTATATTTTCTCTTGAAA 517996 | | || | | || | | | | | | | | ||| | |||| || |||||||| Sbjct 4751 TCAATCGCCTGAGAGCCCTGGGGTTA-CCACTTATGTCTTTCTTATTCTTCCTCTTGAAT 4693 Query 517997 TCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTT 518056 || | ||| | | || | | ||| ||||| ||||| ||||| | | || | Sbjct 4692 TCCTGGACAAAGTGGTTCACCATTCTATTGTCAAAGTCTTCCCCTCCAAGATGGGTGTCA 4633 Query 518057 CCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGG 518116 || | ||||| | |||| ||||| || || |||| | | ||| | |||||| | Sbjct 4632 CCAGCAGTAGCCTTCACTTCGAAAATGCCCTCCTCAATTGTAAGAAGGGAGACATCAAAG 4573 Query 518117 GTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTC-TTGG-----TTTTTA 518170 || |||||||| | |||||| || | |||||| | || | ||| || ||| Sbjct 4572 GTACCACCACCAAGATCAAAGATCAACACATTCTTCTCACCAACACTGGTCGCCTTCTTA 4513 Query 518171 TCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGA 518230 || | ||||| |||| ||||| || || || || || || || | || ||||| ||| Sbjct 4512 TCCAAGCCATAGGCAATGGCAGCTGCTGTGGGCTCGTTGATGATACGCATCACATTGAGA 4453 Query 518231 CCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGA 518290 || | ||| || ||||| || || || || | || ||||| || || || || || Sbjct 4452 CCGGAAATAACGCCAGCATCCTTGGTAGCCTGACGCTGGGAATCATTGAAGTAAGCTGGG 4393 Query 518291 ACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATT 518350 || |||| || |||| | ||| ||||| ||| || || |||| ||||| Sbjct 4392 ACGGTAACCACAGCATTTTTCACTGTGGAACCAAGATATGCCTCAGCAGTTTCCTTCATC 4333 Query 518351 TTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTT 518394 ||| | |||| ||| |||||||| | || | ||| |||| || Sbjct 4332 TTAATCAAAACCATGGATGAAATCTCCTCAGCTGAAAATTGTTT 4289 >seq579699 Length=1937 Score = 150 bits (166), Expect = 1e-30 Identities = 337/493 (68%), Gaps = 20/493 (4%) Strand=Plus/Minus Query 517816 TTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAA-TCAATTCCTTCGAACAAAGAAT 517874 ||| |||||| | || | |||| ||| | || || ||||| || ||| ||||||||| Sbjct 1879 TTCCTCGAATCTGGCACGGGTAATGGTGG-AGTAGAAGTCAATGCCCTCGTACAAAGAAT 1821 Query 517875 CAACTTCAATCGTAGTTTG---AGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATG 517931 ||| ||||| || ||||| ||| || || || ||| | | || || | |||||| | Sbjct 1820 CAATCTCAATGGTGGTTTGGGCAGTGGAGGA-GAGAGTCCTCTTT--GCCCTTTCACAAG 1764 Query 517932 CTGTCCTTAGTCTTCGTAAG-GCTTTTGCTGATTG--ATTCAAATCTGTTTTATATTTTC 517988 | || || | ||||| |||| ||| | | |||| | | | ||| |||| | || | Sbjct 1763 CAGTTCTCAATCTTC-TAAGAGCTCTGG--GATTCCCACTGATATCCTTTTTGTTCTTCC 1707 Query 517989 TCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATT 518048 ||||||| || | |||| | | || | | |||||||||||||||||| || | | Sbjct 1706 TCTTGAATTCCTGAACAAAGTGGTTCACCATTCTATTATCAAAATCTTCACCACCAAGGT 1647 Query 518049 TAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTA 518108 || | ||| | || ||| | |||| |||| || || |||| | | ||| | | Sbjct 1646 GGGTGTCTCCAGCAGTTGCTTTGACTTCAAAAATCCCCTCCTCAATGGTTAGAAGCGAGA 1587 Query 518109 CATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGT--CT--TGG 518164 ||||| || ||||| || | ||||| || || |||||| | || | || ||| Sbjct 1586 CATCAAAAGTGCCACCTCCAAGGTCAAATATCAGGACATTCTTCTCACCGCTGCTGCTGG 1527 Query 518165 --TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAA 518222 || || || ||||| || |||| ||||| ||||| || |||||||| || | || | Sbjct 1526 CCTTCTTGTCGAGACCGTAAGCAATGGCAGCTGCAGTAGGCTCATTAATTATACGCATGA 1467 Query 518223 CATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAAT 518282 | || ||||||| || ||| ||||| || ||||| || | || || || || |||| Sbjct 1466 CGTTGAGACCAGAGATCACTCCAGCATCCTTGGTGGCCTGCCGCTGGGAGTCATTGAAAT 1407 Query 518283 ATGCAGGAACAGT 518295 ||||||| ||||| Sbjct 1406 ATGCAGGCACAGT 1394 >seq483499 Length=10500 Score = 129 bits (142), Expect = 4e-24 Identities = 159/216 (74%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 518078 AAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAA 518137 |||| ||||| |||| | ||| | | | ||||| ||||||||||| | ||||| Sbjct 762 AAAACTCCATTATCAATGGTCAAGATACTGACATCGAATGTTCCACCACCAAGGTCAAAG 703 Query 518138 ATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCA 518197 | ||| | |||| |||| ||| | ||||| | ||| || |||| || ||||| Sbjct 702 ACAAGAATATTCTTTTCACCTCCTT---TCTTATCCAAACCGTATGCAATTGCTGCAGCC 646 Query 518198 GTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTG 518257 |||||||||||||||||||||| |||||| | ||||||||| | ||||||||||| || Sbjct 645 GTTGGTTCATTAATAATTCTCACAACATTCAAGCCAGCAATTGTCCCTGCATCTTTGGTT 586 Query 518258 GCTTGTCTTTGTGAATCGTTAAAATA---TGCAGGA 518290 || || ||||| | ||| || || || ||||||| Sbjct 585 GCCTGCCTTTGGGCATCATTGAAGTAAGCTGCAGGA 550 >seq339340 Length=776 Score = 109 bits (120), Expect = 4e-18 Identities = 134/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 518531 GTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTC 518590 || ||||| || || || || | |||| || ||||| ||||| |||||| | || || Sbjct 731 GTGTTGGTAGGGTTCATGGCGACCTGATTCTTCGCTGCGTCTCCGATCAGACGCTCGGTA 672 Query 518591 TCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCA 518650 || || || | ||||| || || || ||||| ||||||||||||||||| || || ||| Sbjct 671 TCGGTGAAAGCCACATACGACGGCGTCGTGCGGTTACCTTGATCATTCGCGATGATCTCA 612 Query 518651 ACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATA 518710 || || ||| ||||| || || ||||| | || ||||| ||||| || ||||| Sbjct 611 ACCCTATCATGCTGCCAAACTCCCACACACGAGTATGTGGTTCCCAAATCGATTCCAATC 552 Query 518711 GCA 518713 ||| Sbjct 551 GCA 549 >seq567771 Length=2768 Score = 107 bits (118), Expect = 1e-17 Identities = 113/149 (76%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 || || |||| ||||| || |||| |||||| || |||||||||||||||| | |||| Sbjct 869 TTCTTCTCAAACCCATATGCCAAAGAAGCAGCGGTGGGTTCATTAATAATTCGGAGAACA 810 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 | | |||||| || | || |||||||| || || ||| || || ||||| ||||| Sbjct 809 TCCAAACCAGCTATACGGCCAGCATCTTTTGTTGCAGTTCTCTGGGAGTCGTTGAAATAG 750 Query 518285 GCAGGAACAGTAATAACGGCATCAGTTAC 518313 || || |||||||| || || | |||||| Sbjct 749 GCGGGCACAGTAATCACTGCTTTAGTTAC 721 >seq392475 Length=6149 Score = 105 bits (116), Expect = 5e-17 Identities = 178/257 (69%), Gaps = 3/257 (1%) Strand=Plus/Minus Query 518038 ACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGA 518097 ||||||||| | ||||| ||| || || || | || | |||| |||| || Sbjct 3572 ACCTCCCAAATGAGTATCTCCATTTGTTGCAAGCACCTCAAACACACCATTGTCAATAGT 3513 Query 518098 CAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTT 518157 ||| | | | |||||| ||||||||||| | ||||| | || | ||| |||| Sbjct 3512 CAAGATACTGACATCAAAAGTTCCACCACCAAGGTCAAAGACCAGGATGTTCTTTTCACC 3453 Query 518158 GTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCT 518217 | | | || || | ||| || |||| || ||||| ||||||||||| |||||||| Sbjct 3452 ACCCT---TCTTGTCCAAACCGTATGCAATTGCTGCAGCGGTTGGTTCATTTATAATTCT 3396 Query 518218 CAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTT 518277 | ||||| || |||||||| | || ||||| |||||||||||||| || | ||| || Sbjct 3395 GACCACATTCAGCCCAGCAATAGTGCCAGCATCCTTAGTGGCTTGTCTCTGAGCATCATT 3336 Query 518278 AAAATATGCAGGAACAG 518294 || || || | || || Sbjct 3335 GAAGTAAGCTGCAAGAG 3319 >seq650005 Length=3068 Score = 104 bits (114), Expect = 2e-16 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 || |||| | |||||| | | |||||||||||| || ||||| ||||||||| ||| Sbjct 2541 TTGTTATTCATACCATAGGACAGAGCAGCAGCAGTAGGCTCATTGATAATTCTCTGCACA 2600 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 | ||| ||||| || ||||| ||||| ||||| ||||| | || | ||| |||||||| Sbjct 2601 TCAAGGCCAGCTATCCTTCCAGCATCCTTAGTAGCTTGCCGCTGGGCATCATTAAAATAG 2660 Query 518285 GCAGGAACAGTAATAACGGC 518304 || || || ||||| || || Sbjct 2661 GCTGGTACTGTAATGACAGC 2680 >seq733272 Length=3804 Score = 100 bits (110), Expect = 2e-15 Identities = 111/146 (76%), Gaps = 3/146 (2%) Strand=Plus/Plus Query 518159 TCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTC 518218 |||| ||| || |||| ||||| | || ||||| || || || ||||||||||| || Sbjct 2062 TCTTTGTTGTT--CAAG-CCATAAGAAAGTGCAGCGGCTGTGGGCTCATTAATAATCCTT 2118 Query 518219 AAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTA 518278 |||| |||||| || ||||| || |||||||| |||||||| || || | ||| ||| Sbjct 2119 TGTACATCAAGACCCGCTATTCTGCCAGCATCTTTGGTGGCTTGCCTCTGAGCATCATTA 2178 Query 518279 AAATATGCAGGAACAGTAATAACGGC 518304 ||||| || ||||| || || || || Sbjct 2179 AAATACGCCGGAACCGTGATCACAGC 2204 >seq663505 Length=2050 Score = 98.7 bits (108), Expect = 7e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 518504 CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTG 518563 || || || || || || ||||||| ||| || ||||| || || | |||| ||| Sbjct 2043 CCGATCAAACGCTTGGCGTCAAAAACAGTGTTCTGCGGATTCATCGCGACCTGATTCTTG 1984 Query 518564 GCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGA 518623 || || || || || || | || || || || || | |||||| |||||||| || | Sbjct 1983 GCGGCGTCGCCTATGAGGCGCTCGGTGTCGGTGAAGGCAACATAGGATGGAGTGGTCCTG 1924 Query 518624 TTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTA 518683 || ||||||||||| | ||||||||| || | | || ||||| | || || || || Sbjct 1923 TTGCCTTGATCATTGGGAATAATTTCGACACGATCGTTCTGCCAGATGCCAACGCAGCTG 1864 Query 518684 AAAGTTGTTCCTAAATCAATACCAATAGC 518712 | || || || | |||||| |||||||| Sbjct 1863 TAGGTGGTGCCGAGATCAATTCCAATAGC 1835 >seq335363 Length=923 Score = 96.9 bits (106), Expect = 3e-14 Identities = 148/208 (71%), Gaps = 6/208 (3%) Strand=Plus/Plus Query 518108 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTT 518167 |||||| || ||||| || | ||||||| ||| | | |||| ||| ||| || Sbjct 165 ACATCAAAAGTGCCACCTCCAAGGTCAAAAACAAGAA---TTGTTTCATTG-CTT--TTC 218 Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227 || |||| |||||| || || | |||||||||||||| || ||||| | | ||| | Sbjct 219 TTTTCAAAACCATAGGCCAAGGATGCAGCAGTTGGTTCGTTTATAATACGGAGAACCTCT 278 Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287 | ||||||||| | || ||||| || || || ||| || ||||| || || |||||| Sbjct 279 AAACCAGCAATACGACCAGCATCCTTGGTTGCAGTTCTCTGAGAATCATTGAAGTATGCA 338 Query 518288 GGAACAGTAATAACGGCATCAGTTACTT 518315 ||||| || | || || | ||| |||| Sbjct 339 GGAACTGTGACCACAGCTTTAGTAACTT 366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3741407213055328