Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ruellia_20speciosa_20[genbank_20GCA_5F001909325.1_202016-12-20] 794,288 sequences; 740,035,655 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq551794 93.3 2e-14 >seq551794 Length=11183 Score = 93.3 bits (102), Expect = 2e-14 Identities = 162/236 (69%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 26063 CTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTC 26122 ||||||||||| || || || |||||||| || || | ||||| |||||||| ||| Sbjct 4318 CTACCTTTTCTCTTGCCACCTCCTTGATCAACATAACGAGCAGTGTCATTGAACACTCGA 4377 Query 26123 AACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGAT 26182 | ||| ||||| | ||| | || ||| ||||| | | | || | | |||||| | Sbjct 4378 AGCATCGGAACAATGCCATTAGATGTTCCATTTGTTCCACGTATGTAGCTTCCTGTAGCA 4437 Query 26183 CTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCT 26242 | ||| | |||||| || ||| ||||| ||||| |||| ||| | ||||| || Sbjct 4438 CGAATGTTATGAGCAGAAACACCAATTCCTCCAGCTGATTTGCTGATAACAGCACACTCC 4497 Query 26243 GAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACA 26298 | |||||| | || || | |||||||| | ||||| | || || ||||| Sbjct 4498 TTCAGTGTATCATATATGCCCTCAATGCTATCCTCCTTCATGCATATCAAGAAACA 4553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 250590475379600