Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ruellia_20speciosa_20[genbank_20GCA_5F001909325.1_202016-12-20] 794,288 sequences; 740,035,655 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq784841 468 6e-127 seq585748 407 2e-108 seq585752 309 3e-79 seq492030 279 6e-70 seq585461 203 4e-47 seq623142 107 2e-18 seq567144 104 3e-17 seq572160 98.7 1e-15 seq631999 93.3 5e-14 seq9763 89.7 6e-13 seq572830 87.8 2e-12 seq789569 82.4 9e-11 >seq784841 Length=3474 Score = 468 bits (518), Expect = 6e-127 Identities = 700/986 (71%), Gaps = 6/986 (1%) Strand=Plus/Plus Query 124049 GCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCCAAGTTT 124108 |||| || || |||||||| || ||||| | ||||||||||||||||| ||| | ||| Sbjct 2016 GCTAAATCCAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCAGACCAAGGTTA 2075 Query 124109 GCTCTGTTTAGAACATCACCCCATGTTGGGACGATTTTTCCGTTAGCATCAACAACTGAT 124168 || | || | | |||| |||| || | | || | | |||||| || ||| Sbjct 2076 GCACGATTGATGATATCAGCCCAAGTATTAATTACACGGCCTTGACTATCAACTACAGAT 2135 Query 124169 TGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGATACCCATAGAGGTTAAC 124228 |||| || |||||||| || |||||||| ||||| |||| ||||| | || || ||| Sbjct 2136 TGGTAGAAATTGAAACCGTTTAAGTTGAAAGCCATAGTGCTAATACCTAAAGCAGTGAAC 2195 Query 124229 CATACACATACAACAGGGAAAACTGCTAGGAAGAAGTGAAGACTTCTTGAGTTGTTGAAT 124288 || | || || ||||| || | |||| ||||||||| | | |||||||| || Sbjct 2196 CAGATACCCACTACAGGCCAAGCAGCTAAGAAGAAGTGTAATGAACGAGAGTTGTTAAAA 2255 Query 124289 GAAGCATACTGGAAGATAAGACGACCAAAGTAACCGTGTGCTGCTACTATGTTGTATGTT 124348 || ||| ||||| || || || ||||| ||||| || || ||||| || || || ||| Sbjct 2256 CTAGTATATTGGAATATCAGTCGGCCAAAATAACCATGAGCGGCTACAATATTATAAGTT 2315 Query 124349 TCTTCTTCTTGTCCGAACTTATAACCATAGTTCTGTGACTCTTGCTCTGTTGTTTCTCTG 124408 ||||| ||||| || || || ||||| | || || || | ||||| ||||| ||| Sbjct 2316 TCTTCCTCTTGACCAAATTTGTAACCTTCATTAGTAGATTCATTTTCTGTGGTTTCCCTG 2375 Query 124409 ATTAGAGAAGATGTAA-CAAGAGAACCATGCATTGCTGAGAATAAAGATCCTCCGAACAT 124467 || | | ||| || | |||| ||||||||||| || ||||| || || ||||| | Sbjct 2376 ATCAAACTAGAAGTTATCAAG-GAACCATGCATAGCATTGAATAGGGAGCCGCCGAATAC 2434 Query 124468 TCCTGCTACTCCTGCCATGTGGAAAGGATGCATTAGAATGTTATGCTCTGCTTGGAAAAC 124527 || ||||| ||| |||||| || || ||||| || ||||| ||||| |||||||| || Sbjct 2435 ACCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCTTGGAATAC 2494 Query 124528 GAACATAAAGTTGAAAGTACCTGAGATACCAAGTGGCATACCATCAGAGAATGAACCCTG 124587 | |||||||||||||||||| || || || || |||||||||||||| || || || Sbjct 2495 AATCATAAAGTTGAAAGTACCAGAAATTCCTAGAGGCATACCATCAGAAAAACTTCCTTG 2554 Query 124588 ACCAAATGGGTATACTAAGAATACAGCGAATGCAGCAGATACTGGTGCTGAATAAGCAAC 124647 ||||| |||||| | ||||| ||||||| ||||| | || || | | |||| |||| Sbjct 2555 ACCAATTGGGTAGATCAAGAAAACAGCGATAGCAGCTGCAACAGGAGTTAAATATGCAAA 2614 Query 124648 ACAGATCCAAGGACGCATTCCTAATCTGTATGATAGTTCCCACTGTCTTCCCATGTATGC 124707 | |||||||| ||||| || | | | | | |||||||| | |||||||| Sbjct 2615 AGCAATCCAAGGTCGCATACCCAGACGGAAACTAATTTCCCACTCACGACCCATGTAACA 2674 Query 124708 TGAAATACCAATAAGGAAGTGGAAAATTACCAACTGATAAGGACCACCATTATACAACCA 124767 | | ||||| | |||||| | || | | | ||||||||||| || || ||||| Sbjct 2675 AGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACAGTTGTATAACCA 2734 Query 124768 TTCATCAACAGTTGCTGCTTCCCAGATTGGGTAGAAGTGTAGTCCGATAGCGTTTGATGA 124827 |||||||| | || |||||||||||||||||| || || | |||||||| || | Sbjct 2735 CTCATCAACGGATGTTGCTTCCCAGATTGGGTAAAAATGCAAACCGATAGCTGCAGAAGT 2794 Query 124828 TGGAACAACTGCACCAGAGATGATGTTGTTACCATATAAGAAAGAACCCGCTACTGGTTC 124887 |||| || ||||| ||||| || | ||| ||||| | | ||| || | || ||||| Sbjct 2795 AGGAATAATGGCACCTGAGATAATATCGTTTCCATAAAGTAGAGACCCAGAAACAGGTTC 2854 Query 124888 TCTGATTCCGTCGATATCGACAGGAGGTGCTGCAATAAATGCAACGATGAA-ACATGCTG 124946 | || || || ||||| || ||||| || |||| || |||| || || ||| | | Sbjct 2855 ACGAATACCATCAATATCCACTGGAGGAGCAACAATGAAGGCAATAATAAATACA-GAAG 2913 Query 124947 CTGCTGTGAGTAAGCATGGAATCATTAGAACACCAAACCAACCAACATAAATTCTGTTGT 125006 ||| || | |||| || ||||| | |||||||| ||| |||| |||| | ||| | Sbjct 2914 TTGCGGTCAATAAGGTAGGGATCATCAAAACACCAACCCATCCAATGTAAAGACGGTT-T 2972 Query 125007 TTGTTGAT-GTTACCCACTCACAGAA 125031 | | || | |||| ||| | |||||| Sbjct 2973 TCGGTGCTGGTTATCCAGTTACAGAA 2998 >seq585748 Length=906 Score = 407 bits (450), Expect = 2e-108 Identities = 607/856 (71%), Gaps = 4/856 (0%) Strand=Plus/Plus Query 124178 TTGAAACCATTCAAGTTGAATGCCATTGTGCAGATACCCATAGAGGTTAACCATACACAT 124237 |||||||| || |||||||| ||||| |||| ||||| | || || ||| | | || Sbjct 2 TTGAAACCGTTTAAGTTGAAAGCCATAGTGCTAATACCTAAAGCAGTGAACTAGATACCC 61 Query 124238 ACAACAGGGAAAACTGCTAGGAAGAAGTGAAGACTTCTTGAGTTGTTGAATGAAGCATAC 124297 || ||||| || | |||||||||||||| | | ||||||||||| |||| | Sbjct 62 ACTACAGGCCAAGCAGCTAGGAAGAAGTGTAATGAACGAGAGTTGTTGAAACTAGCAAAT 121 Query 124298 TGGAAGATAAGACGACCAAAGTAACCGTGTGCTGCTACTATGTTGTATGTTTCTTCTTCT 124357 |||||||| || || ||||| ||||| || || ||||| || || || |||||||| ||| Sbjct 122 TGGAAGATCAGTCGGCCAAAATAACCATGAGCGGCTACAATATTATAAGTTTCTTCCTCT 181 Query 124358 TGTCCGAACTTATAACCATAGTTCTGTGACTCTTGCTCTGTTGTTTCTCTGATTAGAGAA 124417 || || || || ||||| | || || || | ||||| ||||| ||||| | | | Sbjct 182 TGACCAAATTTGTAACCTTCATTAGCGGATTCATTTTCTGTGGTTTCCCTGATCAAACTA 241 Query 124418 GATGTAACAAGAGAACCATGCATTGCTGAGAATAAAGATCCTCCGAACATTCCTGCTACT 124477 || | || | ||||||||||| | ||||| || || ||||| | || ||||| Sbjct 242 GAACTTACCAAGGAACCATGCATAGAACTGAATAGGGAGCCGCCGAATACACCAGCTACG 301 Query 124478 CCTGCCATGTGGAAAGGATGCATTAGAATGTTATGCTCTGCTTGGAAAACGAACATAAAG 124537 ||| |||||| || || ||||| || ||||| ||||| || ||||| || | ||||||| Sbjct 302 CCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACAATCATAAAG 361 Query 124538 TTGAAAGTACCTGAGATACCAAGTGGCATACCATCAGAGAATGAACCCTGACCAAATGGG 124597 ||||||||||| || || || || |||||||||||||| || || ||||| | |||| Sbjct 362 TTGAAAGTACCAGAAATTCCTAGAGGCATACCATCAGAAAAACTTCCTTGACCGATTGGG 421 Query 124598 TATACTAAGAATACAGCGAATGCAGCAGATACTGGTGCTGAATAAGCAACACAGATCCAA 124657 || | ||||| ||||| |||| | || || |||||||| |||||| |||||| Sbjct 422 TAGATCAAGAAAACAGCAGTAACAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAA 481 Query 124658 GGACGCATTCCTAATCTGTATGATAGTTCCCACTGTCTTCCCATGTATGCTGAAATACCA 124717 || ||||| || | | | | |||||||||| | |||||||| | | |||| Sbjct 482 GGTCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATGTAACAAGCTACACCA 541 Query 124718 ATAAGGAAGTGGAAAATTACCAACTGATAAGGACCACCATTATACAACCATTCATCAACA 124777 | | || ||| | || | | | |||||||||||| || || ||||| |||||||| Sbjct 542 AGTAAGATGTGTAGAACAATTAGTTCATAAGGACCACCGTTGTATAACCACTCATCAACG 601 Query 124778 GTTGCTGCTTCCCAGATTGGGTAGAAGTGTAGTCCGATAGCGTTTGATGATGGAACAACT 124837 | ||||||||||||||||||||| || || | |||| || || | |||| || Sbjct 602 GATGCTGCTTCCCAGATTGGGTAAAAATGCAAATCGATTGCTGCAGAAGTAGGAATAATG 661 Query 124838 GCACCAGAGATGATGTTGTTACCATATAAGAAAGAACCCGCTACTGGTTCTCTGATTCCG 124897 ||||| ||||| || ||||| || || | | ||| || | || ||||| | || || Sbjct 662 GCACCTGAGATAATATTGTTTCCGTAAAGTAGAGACCCAGAAACAGGTTCACGAATACCA 721 Query 124898 TCGATATCGACAGGAGGTGCTGCAATAAATGCAACGATGAA-ACATGCTGCTGCTGTGAG 124956 || ||||| || ||||| || | ||| || |||| || || ||| | ||| || | Sbjct 722 TCAATATCCACTGGAGGAGCAGTAATGAAAGCAATAATAAATACA-AAAGTTGCGGTCAA 780 Query 124957 TAAGCATGGAATCATTAGAACACCAAACCAACCAACATAAATTCTGTTGTTTGTTGAT-G 125015 |||| || ||||| | |||||||||||| |||| |||| | ||| || | || | | Sbjct 781 TAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTT-TTCGGTGCTGG 839 Query 125016 TTACCCACTCACAGAA 125031 ||| | | | |||||| Sbjct 840 TTATCGAGTTACAGAA 855 >seq585752 Length=1498 Score = 309 bits (342), Expect = 3e-79 Identities = 446/624 (71%), Gaps = 9/624 (1%) Strand=Plus/Plus Query 124049 GCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCCAAGTTT 124108 |||| ||||| |||||||| || |||| |||||||||||||||||||||| | ||| Sbjct 817 GCTAAATCTAGAGGGAAGTTATGAGCATGAGTTTCATGCATAACTTCCATACCAAGGTTA 876 Query 124109 GCTCTGTTTAGAACATCACCCCATGTTGGGACGATTTTTCCG--TTAGC-ATCAACAACT 124165 || | || | | |||| || | || | | || | | || || |||||| | Sbjct 877 GCACGATTGATGATATCAGCCTAAGT----ATTAATTAACGGCCTTGGCTATCAACTATA 932 Query 124166 GATTGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGATACCCATAGAGGTT 124225 |||||||| || |||||| | || |||||||| |||| || ||||| | || || Sbjct 933 GATTGGTTGAAATTGAAATCGTTTAAGTTGAAAACCATAGTTGTAATACCTAAAGTAGTG 992 Query 124226 AACCATACACATACAACAGGGAAAACTGCTAGGAAGAAGTGAAGACTTCTTGAGTTGTTG 124285 ||| | |||| || ||||| || |||||||||||||| | | ||||||||| Sbjct 993 AACTAGACACCTAGTACAGGCCAAGAAGCTAGGAAGAAGTGTAATGAACGAGAGTTGTTG 1052 Query 124286 AATGAAGCATACTGGAAGATAAGACGACCAAAGTAACCGTGTGCTGCTACTATGTTGTAT 124345 || || ||| |||||||| || |||||||| ||||| || || ||||| || || || Sbjct 1053 AAACTAGTATATTGGAAGATCAGTCGACCAAAATAACCATGAGCGGCTACAATATTATAA 1112 Query 124346 GTTTCTTCTTCTTGTCCGAACTTATAACCAT-AGTTCTGTGACTCTTGCTCTGTTGTTTC 124404 |||||||| ||||| || | || ||||| | | | || || || | ||||| ||||| Sbjct 1113 GTTTCTTCCTCTTGACCACATTTGTAACCTTCACTAGTG-GATTCATTTTCTGTGGTTTC 1171 Query 124405 TCTGATTAGAGAAGATGTAACAAGAGAACCATGCATTGCTGAGAATAAAGATCCTCCGAA 124464 || || | | ||| || |||| ||||||| ||| || |||||| || || ||||| Sbjct 1172 CCTAATCAAACTAGAAGTTACAAAGGAACCATTCATAGCATTGAATAAGGAGCCGCCGAA 1231 Query 124465 CATTCCTGCTACTCCTGCCATGTGGAAAGGATGCATTAGAATGTTATGCTCTGCTTGGAA 124524 | || ||||| ||| |||||| || || ||||| || ||||| |||| || ||||| Sbjct 1232 TACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTTAGCCTGGAA 1291 Query 124525 AACGAACATAAAGTTGAAAGTACCTGAGATACCAAGTGGCATACCATCAGAGAATGAACC 124584 || | |||||||||||||||||| || || || || |||||||||||||| || || Sbjct 1292 TACAATCATAAAGTTGAAAGTACCAGAAATTCCTAGAGGCATACCATCAGAAAAACTTCC 1351 Query 124585 CTGACCAAATGGGTATACTAAGAATACAGCGAATGCAGCAGATACTGGTGCTGAATAAGC 124644 ||||| | |||| | |||||| ||| || ||||| | | | |||||||| || Sbjct 1352 TTGACCGATCTGGTAGATTAAGAAAACAACGGTAGCAGCTGTAGCAAGAGCTGAATATGC 1411 Query 124645 AACACAGATCCAAGGACGCATTCC 124668 |||| ||||||| ||||| || Sbjct 1412 AACAACAATCCAAGATCGCATACC 1435 >seq492030 Length=881 Score = 279 bits (308), Expect = 6e-70 Identities = 327/442 (74%), Gaps = 0/442 (0%) Strand=Plus/Minus Query 124156 ATCAACAACTGATTGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGATACC 124215 |||||| || |||||||| || |||||||| || |||||||| ||||| |||| ||||| Sbjct 835 ATCAACTACAGATTGGTTGAAATTGAAACCGTTTAAGTTGAAGGCCATAGTGCTAATACC 776 Query 124216 CATAGAGGTTAACCATACACATACAACAGGGAAAACTGCTAGGAAGAAGTGAAGACTTCT 124275 | || || ||||| | || || ||||| || | |||||||||||||| | | Sbjct 775 TAAAGCAGTGAACCAGATACCCACTACAGGCCAAGCAGCTAGGAAGAAGTGTAATGAACG 716 Query 124276 TGAGTTGTTGAATGAAGCATACTGGAAGATAAGACGACCAAAGTAACCGTGTGCTGCTAC 124335 ||||||||||| |||||| |||||||| || || ||||| ||||| || || ||||| Sbjct 715 AGAGTTGTTGAAACTAGCATATTGGAAGATCAGTCGGCCAAAATAACCATGAGCGGCTAC 656 Query 124336 TATGTTGTATGTTTCTTCTTCTTGTCCGAACTTATAACCATAGTTCTGTGACTCTTGCTC 124395 || || || |||||||| ||||| || || || ||||| | || || || | || Sbjct 655 AATATTATAAGTTTCTTCCTCTTGACCAAATTTGTAACCTTCATTAGCGGATTCATTTTC 596 Query 124396 TGTTGTTTCTCTGATTAGAGAAGATGTAACAAGAGAACCATGCATTGCTGAGAATAAAGA 124455 ||| ||||| ||||| | | ||| || || | ||| ||||||| || ||||| || Sbjct 595 TGTGGTTTCCCTGATCAAACTAGAAGTTACCAAGGAATCATGCATAGCACTGAATAGGGA 536 Query 124456 TCCTCCGAACATTCCTGCTACTCCTGCCATGTGGAAAGGATGCATTAGAATGTTATGCTC 124515 || ||||| | || ||||| ||| |||||| || || ||||| || ||||| ||||| Sbjct 535 GCCGCCGAATACACCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTC 476 Query 124516 TGCTTGGAAAACGAACATAAAGTTGAAAGTACCTGAGATACCAAGTGGCATACCATCAGA 124575 || | ||| || | |||||||||||||||||| || || || || |||||||||||||| Sbjct 475 AGCCTAGAATACAATCATAAAGTTGAAAGTACCAGAAATTCCTAGAGGCATACCATCAGA 416 Query 124576 GAATGAACCCTGACCAAATGGG 124597 || || ||||| | |||| Sbjct 415 AAAACTTCCTTGACCGATTGGG 394 >seq585461 Length=917 Score = 203 bits (224), Expect = 4e-47 Identities = 395/584 (68%), Gaps = 21/584 (4%) Strand=Plus/Plus Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925 |||||| ||||| || | ||||| | || || |||||||||| || ||||| || || Sbjct 354 TTAAAGAGCGTTTCCACGTGGTAGAAGCTCCTCAGGGAATACAAGGTTTTCATGAGGCTG 413 Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985 || || | |||||| || | || ||||| || | ||||| || || || ||||| Sbjct 414 ATCTTGAGCCGCCATCCAAGCACGAATACCTTCGTTTAATAGAATTTTTTTTGTGTAGAA 473 Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045 |||||| || || || ||||| || || | || |||||||| || ||||| || || | Sbjct 474 AGTCTCAAATTCCGGATCTTCCGCGGCACGAATTTCTTGAGAAACGAAGTCATAGGCACG 533 Query 123046 GAGGTTAAGTGCTAGACCTACGATACCTATAGATGATGTCCACATACCCATGACAGGAAC 123105 ||||| || || | ||| || | || | || |||| | ||| | || || || Sbjct 534 TAGGTTCAGGGCCAAACCGACTAATCCAAGAGCACTCATCCATAAACCGGTTACTGGTAC 593 Query 123106 GAACAACATAAGGAAGTGTAAGAATCTTTTGTTAGAAAATGCGATACCAAATATCTGTGA 123165 || ||||||| ||| ||||| | | | | || ||||| || | ||||| || || || Sbjct 594 AAATAACATAAAGAAATGTAACCAACGTGTATTGGAAAAAGCAACCCCAAAGATTTGGGA 653 Query 123166 CCAGAATCTGTTCGCTGTAATCATACTATAAGTTTCTTCTTCCTGTGTAGGATCGAATGC 123225 ||| || | ||| || || | ||| |||||||||||| | || || || | || || Sbjct 654 CCAAAAGCGGTTAGCGGTGACCATGGAATAAGTTTCTTCAGCTTGAGTTGGGTTAAAAGC 713 Query 123226 TCTGAAAGTTGTAGATTGAATCTTACCTTCAGTATATTGTGATGTGTCTTCATACAATGT 123285 | ||| |||| ||| || ||| | |||||| | || || Sbjct 714 ACGGAA---TGTA-TTTG-----CGCCATCACCA------------TCTTCAAATAAAGT 752 Query 123286 GTTCTGCACTGTTGCACCATGAATGGCACATAGTAATGCTCCACCTAGTATTCCTGCAAC 123345 || | || || ||||||||||| ||||||||||| || | || | || || ||||| Sbjct 753 ATTTTCTACGGTAGCACCATGAATAGCACATAGTAAAGCAGCCCCCAATACACCAGCAAC 812 Query 123346 ACCCATCATGTGAAATGGATTCAATGTAATGTTGTGGAAACCTTGTATGAATAAGATATA 123405 |||||||| |||||||| |||| || || || || ||||| | || | ||| | Sbjct 813 TCCCATCATATGAAATGGGTTCAGAGTCCAATTATGAAATCCTTGAAAAAAGAGGATGAA 872 Query 123406 ACGAAAGATTGCTGCGACACCGAATGATGGTGCGAAGAACCAAC 123449 ||||| || ||||| ||||| || ||||| |||||||||| Sbjct 873 TCGAAATATAGCTGCTACACCAAAACTAGGTGCAAAGAACCAAC 916 >seq623142 Length=5574 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925 |||||| ||||| || | ||||| || || || |||||||||| || ||||| || || Sbjct 4509 TTAAAGAGCGTTTCCACATGGTAGAACCTCCTCAGGGAATACAAGGTTTTCATGAGGCTG 4568 Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985 || || | |||||| || | || ||||| || | ||||| || || || ||||| Sbjct 4569 ATCTTGAGCCGCCATCCAAGCACGAATACCTTCGTTTAATAGAATATTTTTTGTGTAGAA 4628 Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045 |||||| || ||||| ||||| || | | || |||||||| || ||||| || || | Sbjct 4629 AGTCTCAAATTCTGGATCTTCCGCGGTGCGAATTTCTTGAGAAACGAAGTCATAGGCACG 4688 Query 123046 GAGGTTAAGTGC 123057 ||||| || || Sbjct 4689 TAGGTTCAGGGC 4700 >seq567144 Length=1974 Score = 104 bits (114), Expect = 3e-17 Identities = 126/171 (74%), Gaps = 8/171 (5%) Strand=Plus/Minus Query 124049 GCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCCAAGTTT 124108 |||| ||||| |||||||| || ||||| | ||||||||||||||||||||| | ||| Sbjct 351 GCTAAATCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 292 Query 124109 GCTCTGTTTAGAACATCACCCCATGTTGGGACGATTT----TTCCGTTAGCATCAACAAC 124164 || | || | | |||| |||| || || | || || | | |||||| || Sbjct 291 GCACGATTGATGATATCAGCCCAAGT----ACTAATTACACGGCCTTGACTATCAACTAC 236 Query 124165 TGATTGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGATACC 124215 |||||||| || |||||||| || |||||||| ||||| |||| ||||| Sbjct 235 AGATTGGTTGAAATTGAAACCGTTTAAGTTGAAAGCCATAGTGCTAATACC 185 >seq572160 Length=4591 Score = 98.7 bits (108), Expect = 1e-15 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 124291 AGCATACTGGAAGATAAGACGACCAAAGTAACCGTGTGCTGCTACTATGTTGTATGTTTC 124350 |||||| |||||||| || | ||||| ||||| || || ||||| || | || ||||| Sbjct 4428 AGCATATTGGAAGATCAGTTGGCCAAAATAACCATGAGCGGCTACAATACTATAAGTTTC 4369 Query 124351 TTCTTCTTGTCCGAACTTATAACCATAGTTCTGTGACTCTTGCTCTGTTGTTTCTCTGAT 124410 ||| ||||| || || || ||||| | || || || | ||| | ||||| ||||| Sbjct 4368 TTCCTCTTGACCAAATTTGTAACCTTCATTAGCGGATTCATTTTCTATGGTTTCCCTGAT 4309 Query 124411 TAGAGAAGATGTAACAAGAGAACCATGCATTGCTGAGAATAAAGATCCTCCGAACATTCC 124470 | | ||| || || | ||||||||||| | ||||| || || ||||| | || Sbjct 4308 CAAACTAGAAGTTACCAAGGAACCATGCATAACACTGAATAGGGAGCCGCCGAATACACC 4249 Query 124471 TGCTACTCCTGCCATGTGGAAAGGATG 124497 ||||| ||| |||||| || || || Sbjct 4248 AGCTACGCCTAACATGTGAAATGGGTG 4222 >seq631999 Length=611 Score = 93.3 bits (102), Expect = 5e-14 Identities = 142/201 (71%), Gaps = 1/201 (0%) Strand=Plus/Minus Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925 |||||| ||||| | | | ||| |||| || |||||||||| || ||||| || || Sbjct 204 TTAAAGAGCGTTTCA-CGTAGTAGAACTTTCTCAGGGAATACAAGGTTTTCATGAGGCTG 146 Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985 || || | |||||| || | || ||||| || | ||||| || || || ||||| Sbjct 145 ATCTTGAGCCGCCATCCAAGCACGAATACCTTCGTTTAATAGAATATTTTTTGTGTAGAA 86 Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045 |||||| || || || ||||| || | | || |||||||| || ||||| || || | Sbjct 85 AGTCTCTAATTCCGGATCTTCCGCGGTGCGAATTTCTTGAGAAACGAAGTCATAGGCACG 26 Query 123046 GAGGTTAAGTGCTAGACCTAC 123066 ||||| || || | ||| || Sbjct 25 TAGGTTCAGGGCCAAACCGAC 5 >seq9763 Length=353 Score = 89.7 bits (98), Expect = 6e-13 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 124744 ATAAGGACCACCATTATACAACCATTCATCAACAGTTGCTGCTTCCCAGATTGGGTAGAA 124803 |||||||||||| || || ||||| |||||||| | ||||||||||||||||||||| || Sbjct 23 ATAAGGACCACCGTTGTATAACCACTCATCAACGGATGCTGCTTCCCAGATTGGGTAAAA 82 Query 124804 GTGTAGTCCGATAGCGTTTGATGATGGAACAACTGCACCAGAGATGATGTTGTT 124857 || | ||||||| || | ||| || ||||| ||||| || ||||| Sbjct 83 ATGCAAATCGATAGCTGCAGAAGTAAGAATAATGGCACCTGAGATAATATTGTT 136 >seq572830 Length=4883 Score = 87.8 bits (96), Expect = 2e-12 Identities = 109/147 (74%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 124298 TGGAAGATAAGACGACCAAAGTAACCGTGTGCTGCTACTATGTTGTATGTTTCTTCTTCT 124357 |||||||| || || ||||| ||||| || || ||||| || || || |||||||| ||| Sbjct 641 TGGAAGATCAGTCGGCCAAAATAACCATGAGCGGCTACAATATTATAAGTTTCTTCCTCT 700 Query 124358 TGTCCGAACTTATAACCATAGTTCTGTGACTCTTGCTCTGTTGTTTCTCTGATTAGAGAA 124417 || || || || ||||| | || || || | ||||| ||||| ||||| | | | Sbjct 701 TGACCAAATTTGTAACCTTCATTAGTGGATTCATTTTCTGTGGTTTCCCTGATCAAACTA 760 Query 124418 GATG-TAACAAGAGAACCATGCATTGC 124443 || | || |||| ||||||||||| || Sbjct 761 GAAGGTACCAAG-GAACCATGCATAGC 786 >seq789569 Length=1261 Score = 82.4 bits (90), Expect = 9e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 122930 ACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAAAGTC 122989 ||| | | |||||| || | || ||||| || | ||||| || || || ||||||||| Sbjct 1046 ACAAAAGTCATCCAAGCACGAATACCTTCGTTTAATAGAATATTTTTTGTGTAGAAAGTC 1105 Query 122990 TCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCTGAGG 123049 || || | || ||||| || || | || |||||||| | ||||| || || | ||| Sbjct 1106 TCAAATTTCGGATCTTCCGCGGCGCGAATTTCTTGAGAAATGAAGTCATAGGCACGTAGG 1165 Query 123050 TTAAGTGCTAGACCTACGATACCTATAGATGATGTCCACATACCCATGACAGGAACGAAC 123109 || || || | ||| || | || | || |||| | ||| | || || || || Sbjct 1166 TTCAGGGCCAAACCGACTACTCCAAGAGCACTCATCCATAAACCGGTTACTGGTACAAAT 1225 Query 123110 AACATAAGGAAGTGTAAGAATCTTTTGTTAGAAAA 123144 ||||||| ||| ||||| | | ||| || ||||| Sbjct 1226 AACATAAAGAAATGTAACCAACGTTTATTGGAAAA 1260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 573249756485760