Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ruellia_20speciosa_20[genbank_20GCA_5F001909325.1_202016-12-20] 794,288 sequences; 740,035,655 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq743637 253 2e-61 seq370774 215 4e-50 seq547733 176 3e-38 seq488774 159 3e-33 seq579699 150 1e-30 seq483499 129 4e-24 seq392475 105 5e-17 seq339340 105 5e-17 seq650005 104 2e-16 seq567771 102 6e-16 seq733272 100 2e-15 seq335363 95.1 9e-14 seq663505 93.3 3e-13 >seq743637 Length=3343 Score = 253 bits (280), Expect = 2e-61 Identities = 709/1069 (66%), Gaps = 27/1069 (3%) Strand=Plus/Plus Query 281420 TCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGA 281479 ||||||| || || || ||||||||||||||||| | ||||| ||| || || Sbjct 1064 TCAGCGG-AG--ACGTTCAGAATACCATTGGCATCAATGTCAAAGCACACTGTGATCTGG 1120 Query 281480 GGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTA 281539 || || ||||| ||||||| ||||| || | | ||| |||| || || || Sbjct 1121 GGAACTCCTCTGGGAGCAGGAGGGATGCCGGATAGCTCAAACTTTCCAAGCAAGTTGTTG 1180 Query 281540 TCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCT 281599 ||| | || ||| ||| || || | | || || || ||| ||| || || Sbjct 1181 TCTCTGGTTCGGGTTCTTTCTCCTTCATAGACCTGAATCAGGACACCAGGTTGGTTGTCG 1240 Query 281600 GAATAAGTTGTAAATACTCTGGATTTTTTACA-AGGAATTGTTGTGTTTCTATCAAT-AA 281657 ||||| || | || || ||| || | | ||| || ||||| || || ||| || Sbjct 1241 GAATACGTAGAGAAGAC-CTGCTCCTTCTTCGTAGGGATAGTTGTATTCCTGGGAATCAA 1299 Query 281658 TATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTA 281717 || | |||| | ||||||||| ||||| | |||||| || || ||||||||||||| | Sbjct 1300 TACAG-TCATGACACCACCAGCAGTTTCCAGACCAAGGGAGAGTGGAGTGACATCAAGAA 1358 Query 281718 GGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAG 281777 | | | || |||| || |||| | ||| | |||||| ||||||| ||| | Sbjct 1359 GCAAGAGATCCTGAACCTTCTCATTGCCCTCACCGCTCAAAATAGCAGCTTGAACAGCGG 1418 Query 281778 CACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAA 281837 | |||||||||||||||||||| || || | | | | || | ||||||||||| | Sbjct 1419 CGCCATATGCAACAGCTTCATCGGGGTTGATACTCTTGCAAAGCTCCTTACCATTGAAGA 1478 Query 281838 AAT-TTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATT 281896 | | ||| || || |||| ||||| ||||| | | || || ||||| | ||||| Sbjct 1479 AGTCTTGCAACAA-TTGTTGGACCTTGGGAATCCTGGTCGAGCCACCAACAAGTACAACA 1537 Query 281897 TCATGCACCTGTGAT-TTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAG 281955 ||||| | | ||| | || |||| |||| |||| ||| || ||||| || || | Sbjct 1538 TCATGTA-CAGTGCTCTTGTCCATCTTTGCATCCCTCAAACACTTCTCAACTGGCTCCAT 1596 Query 281956 ACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATT 282015 || || ||||| || ||| || || || | || | |||| ||| || Sbjct 1597 ACACTTCCTGAACAAATCCATGTTAAGCTCCTCAAACCTGGCACGTGTAATTGTGGAATA 1656 Query 282016 ATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTG---AGTCGAAGAAGA 282072 | ||||||| || || | | |||||||| ||||| || ||||| ||| |||| ||| Sbjct 1657 AAAATCAATACCCTCATAAAGAGAATCAATCTCAATGGTTGTTTGGGCAGTGGAAG-AGA 1715 Query 282073 TAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG 282132 ||| | | || || | ||||| || || || | ||| | || || | | | ||| Sbjct 1716 GAGTCCTC--TTTGCCCTCTCACAAGCAGTTCTCAATCTCCTCAACGCCCT--CGGGTTG 1771 Query 282133 --ATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGA 282190 | | | ||| | || | || || || || || | ||| | | || | | | Sbjct 1772 CCACTGATGTCTTTCTTGTTCTTCCTTTTAAATTCCTGGACAAAGTGGTTCACCATTCTA 1831 Query 282191 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 282250 || ||||||||||||||||| | | ||||| || | || || | |||| ||| | Sbjct 1832 TTGTCAAAATCTTCACCTCCAAGGTGAGTATCACCAGCAGTGGCCTTAACTTCGAAGATA 1891 Query 282251 CCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGT 282310 || || |||| | ||| |||| ||||||| || |||||||| | ||||||||| | Sbjct 1892 CCCTCCTCAATTGTCAAGAGAGAAACATCAAAAGTACCACCACCGAGATCAAAAATCAAA 1951 Query 282311 ACATTCATTTC----TTTGTCTTGG--TTTTTATCAAGACCATACGCAAAAGCAGCAGCA 282364 |||||| | || || | | || || ||||||||||| |||| |||||||| Sbjct 1952 ACATTCTTCTCACCAACACTCGTAGCTTTCTTGTCAAGACCATATGCAATTGCAGCAGCT 2011 Query 282365 GTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTG 282424 || || ||||| || || | || ||||| ||||| | ||| || ||||| ||||| Sbjct 2012 GTGGGCTCATTGATGATACGCATCACATTCAGACCTGAAATGACCCCAGCATCCTTAGTA 2071 Query 282425 GCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCAT 282473 ||||| | || || || ||||| || ||||| ||||| | || |||| Sbjct 2072 GCTTGACGCTGAGAGTCATTAAAGTAAGCAGGCACAGTGACCACAGCAT 2120 >seq370774 Length=10529 Score = 215 bits (238), Expect = 4e-50 Identities = 803/1247 (64%), Gaps = 24/1247 (2%) Strand=Plus/Plus Query 281330 GCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTATTAGTAATA 281389 ||||| || ||| ||||||||| ||| | |||| ||| || | ||| || || Sbjct 5484 GCTTCCTGAACCATCTTCTCAATTTCATCCTTTGAGAGTCTACCCTTGTCATTGGTGATG 5543 Query 281390 GTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTG 281449 || || || || || || | || || | |||| |||||| || |||||||| Sbjct 5544 GTGATCTTGTTCTTTTGCCCCGTGGTCTTGTCCTCAGCAGACACATTCAGGATACCATTC 5603 Query 281450 GCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCT 281509 ||||| | ||||| ||| ||| || ||||| || || ||||||| ||||| || Sbjct 5604 GCATCAATGTCAAAACAGACAGTAATCTGGGGGACACCCCTGGGAGCAGGAGGGATTCCA 5663 Query 281510 TCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAA 281569 | | ||| | || || ||| || || | || | ||| || || || | Sbjct 5664 GAAAGCTCAAACTTGCCGAGCAAATTGTTGTCCCTTGTCCTTGTTCTCTCCCCTTCATAC 5723 Query 281570 ATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGGATTTT-TT 281628 | ||||| || | | || || || || || || | ||||| ||| || || Sbjct 5724 ACCTGGATGAGCACACCCGGCTGGTTGTCAGAGTAGGTAGAGAATAC-CTGCTCCTTCTT 5782 Query 281629 ACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCTGTTTCTAA 281688 ||| || || ||||||||| || | | ||||| | ||||||||| ||||| | Sbjct 5783 GGTAGGGATAGTGGTGTTTCTAGGGATCAAAACAGTCATGACACCACCAGCAGTTTCCAG 5842 Query 281689 ACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTG 281748 ||| || || ||||| |||||||||| || | | || |||| || |||| | Sbjct 5843 ACCTAGGGAGAGAGGGGTGACATCAAGAAGCAAGAGATCCTGAACCTTCTCATTGCCCTC 5902 Query 281749 ACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAA- 281807 |||| | |||||| || |||| ||||||||||||||| ||||| |||||||| || | Sbjct 5903 ACCACTCAAAATAGCAGCCTGAACAGCAGCACCATATGCCACAGCCTCATCAGGGTTGAT 5962 Query 281808 -CAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTACCTTAGGA 281866 | || || || | || |||||||| || | | || | || ||||| ||| Sbjct 5963 GCTCTTGCA--AAGCTCCTTCCCATTGAAGAAGTCTTGCAGCAACTGCTGGACCTTGGGA 6020 Query 281867 ATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGAT-TTATCCAGTTTTGA 281925 || | || ||| || || || | |||| ||||| | | ||| | || |||| || | Sbjct 6021 ATTCTAGTTGAACCACCGACAAGGACAACATCATGGA-CAGTGCTCTTGTCCATCTTAGC 6079 Query 281926 ATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTC 281985 ||| ||| || || || ||||| | | ||| ||||| || || || Sbjct 6080 ATCTCTCAAACACTTCTCCACAGGTTCCATGCATTTTCTGAACAAATCCATGTTGAGCTC 6139 Query 281986 TTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAATCAAC 282045 ||||| | || | ||||| |||| | ||||||| || || | | |||||||| Sbjct 6140 CTCGAACCTCGCACGAGTAATAGTGGAGTAGAAATCAATACCCTCATAGAGAGAATCAAT 6199 Query 282046 TTCAATCGTAGTTTG---AGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGT 282102 ||||| || ||||| ||| | || ||| ||| | | || || | ||||| || || Sbjct 6200 CTCAATTGTTGTTTGGGCAGT-GGAGGAGAGAGTCCTC--TTTGCCCTCTCACAGGCAGT 6256 Query 282103 CCTTAGTCTTCGTAAGGCTTTTGCTGATTG--ATTCAAATCTGTTTTATATTTTCTCTTG 282160 ||| | ||| | || || ||| | ||| | | | ||| | || | || ||||| Sbjct 6257 CCTCAATCTCCTCAATGCCCTTG--GGTTGCCAGTGATGTCTTTCTTGTTCTTCCTCTTA 6314 Query 282161 AAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTA 282220 || || | |||| | | || | || || ||||| |||||||| || | | || Sbjct 6315 AATTCCTGAACAAAGTGGTTCACCATGCGGTTGTCAAAGTCTTCACCACCAAGATGGGTG 6374 Query 282221 TTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCA 282280 | || | || || | || | || | || || |||| | |||||||| |||||| Sbjct 6375 TCACCAGCAGTGGCCTTCACCTCAAAGATACCCTCCTCAATGGTCAAAAGAGAGACATCA 6434 Query 282281 TGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTT------CTTTGTCTTGGTTT 282334 || |||||||| | |||||| || | |||||| | | | || | || Sbjct 6435 AAAGTACCACCACCGAGATCAAAGATCAAGACATTCTTCTCACCAACACTGGTTGCCTTC 6494 Query 282335 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 282394 || ||||||||||| |||| ||| ||||| || || ||||| ||||| | || |||||| Sbjct 6495 TTGTCAAGACCATAAGCAATAGCTGCAGCTGTAGGCTCATTGATAATACGCAGCACATTA 6554 Query 282395 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 282454 | |||||||| || ||||| || || ||||| | ||| || || || || || || Sbjct 6555 ATGCCAGCAATCACACCAGCATCCTTGGTAGCTTGACGTTGGGAGTCATTGAAGTACGCT 6614 Query 282455 GGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTC 282514 || ||||| | || || | | || || |||| || || || ||| || Sbjct 6615 GGGACAGTGACCACAGCGTTCTTCACAGCTGAACCAAGGTATGCCTCCGCAATTTCCCTC 6674 Query 282515 ATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTT 282561 ||||| | | || ||| || || |||| ||||| || | ||||||| Sbjct 6675 ATTTTCATCAGAACCATAGAAGAGATTTCTTCTGCAGCAAATTGCTT 6721 >seq547733 Length=2727 Score = 176 bits (194), Expect = 3e-38 Identities = 679/1057 (64%), Gaps = 26/1057 (2%) Strand=Plus/Minus Query 281431 CACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCT 281490 |||||| || ||||| |||||||| | || || ||| | || ||||| || || || Sbjct 1554 CACATTCAGGATACCGTTGGCATCAATGTCGAAACAGACATTGATCTGAGGTACTCCCCT 1495 Query 281491 CTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAA 281550 |||| || ||||| || | | |||| | || || || ||||| || Sbjct 1494 GGGAGCTGGAGGGATGCCCGTGAGCTCAAATTTCCCAAGCAGGTTGTTATCCCGTGTCCT 1435 Query 281551 TTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGT 281610 ||| ||||||||| | | || || ||| ||| ||||| || ||||| || | Sbjct 1434 GGTTCTTTCACCCTCATACACCTGAATCAACACTCCAGGCTGATTGTCCGAATAGGTCGA 1375 Query 281611 AAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCT----ATCAATAATATTGGTCA 281666 || | | || || |||||| || ||||| | ||||| | ||||| Sbjct 1374 GAAGATTTGCTCCTTCTTTGTAGGAATGGTGGTGTTCCGCGGGATCAACAC----GGTCA 1319 Query 281667 TAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT 281726 | | ||| ||||| || || ||||| ||||| | ||| || ||||| | |||| || | Sbjct 1318 TGACACCTCCAGCAGTCTCCAAACCGAGAGACAAAGGCGTAACATCGAGGAGGAGAAGGT 1259 Query 281727 TTTGAAGTTTTTCATCAGTTTGACCAA-CAAGAATAGCTGCTTGAATAGCAGCACCATAT 281785 || | ||| |||| || ||| ||||| | || ||||||| ||||||||||| Sbjct 1258 CCTGCACTTTCTCATTCCCTTCACCGCTCAAGATT-GCAGCTTGAACCGCAGCACCATAC 1200 Query 281786 GCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAA 281845 || || || ||||||||||| | | | | || | || ||||| || |||| | Sbjct 1199 GCCACGGCCTCATCAGGATTGATACTCTTGCAGAGCTCCTTGCCATTAAAGAAATCTTGC 1140 Query 281846 AGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACC 281905 || | |||| ||||| ||||| | | || || ||||| | || | ||||| || Sbjct 1139 AGCAATTGTTGCACCTTTGGAATCCTCGTCGACCCACCAACGAGGACGACATCATGGACA 1080 Query 281906 TGTGATTTATCCAGTTTTGAATCCAATAA-AACTTTTTCAACGGGTTCAAGACCAGCTCT 281964 |||||||| |||| |||| || |||| | || || | || | | | || Sbjct 1079 GCACTTTTATCCATCTTTGCATCCCTCAAGCACTTCTCCACAGGCTCCATGCACTTC-CT 1021 Query 281965 AAACAAGTC--TGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCA 282022 ||||| || || ||| || ||||| | || | ||||| || || |||| Sbjct 1020 GAACAAATCCATGTTCAA--CTCCTCGAACCTCGCACGAGTAATGGTCGAATAGAAATCT 963 Query 282023 ATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGT 282082 ||||| ||| | |||||||| | |||||| || || || | | ||| || || | | Sbjct 962 ATTCCCTCGTATAAAGAATCGATTTCAATGGTGGTCTGTGCAGTAGACGAGAGAGTTCTC 903 Query 282083 TTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATT--GATTCAAAT 282140 || || | ||||| || || || | ||| | || ||| | | |||| | | | || Sbjct 902 TTTGCCCTCTCACAAGCAGTTCTCAATCTCCTCAAAGCTCTGG--GATTCCCACTGATAT 845 Query 282141 CTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAAT 282200 | | |||| || |||||||| || | || | | || | ||| || || |||| Sbjct 844 CCTTCTTATTCTTCCTCTTGAATTCCTGTACGAAGTGGTTCACCATACGGTTGTCGAAAT 785 Query 282201 CTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAA 282260 |||||||||| | | |||| ||| | || ||| | |||| || | ||| ||||||| Sbjct 784 CTTCACCTCCGAGATGGGTATCTCCGGCTGTTGCTTTCACTTCAAAGATTCCTTCTTCAA 725 Query 282261 GAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTT 282320 | | || | |||||| || || ||||| | ||||||||| || |||||| | | Sbjct 724 TGGTGAGGAGTGAGACATCAAATGTGCCTCCACCAAGATCAAAAATCAGCACATTCTTCT 665 Query 282321 C------TTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCAT 282374 | || | || || |||||||| || || | || || || || ||||||| Sbjct 664 CGCCGGAGGTGCCGGCTTTCTTGTCAAGACCGTAAGCGATGGCGGCGGCGGTAGGTTCAT 605 Query 282375 TAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTT 282434 | || || | || ||||| || || | || || || || || ||||| || | | Sbjct 604 TGATGATGCGCATGACATTGAGGCCGGATATGACGCCGGCGTCCTTGGTGGCCTGGCGCT 545 Query 282435 GTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 282471 | |||||||| || || || ||||| || | ||||| Sbjct 544 GGGAATCGTTGAAGTAGGCGGGAACTGTTACGACGGC 508 >seq488774 Length=10034 Score = 159 bits (176), Expect = 3e-33 Identities = 609/944 (65%), Gaps = 24/944 (3%) Strand=Plus/Minus Query 281633 GGAATTGTTGTGTTTCT----ATCAATAATATTGGTCATAATACCACCAGCTGTTTCTAA 281688 ||||| || |||||||| ||||| | ||||||| |||||||||||||| || Sbjct 5223 GGAATGGTGGTGTTTCTTGGGATCAAGACA----GTCATAACTCCACCAGCTGTTTCCAA 5168 Query 281689 ACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTG 281748 ||||| ||||| ||||||||||||| || | | || || | || |||| | Sbjct 5167 CCCAAGGGAAAGGGGAGTGACATCAAGAAGCAAGAGATCCTGGACCTTCTCATTGCCCTC 5108 Query 281749 ACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAA- 281807 ||| | ||| || ||||| | |||||||||||| |||||||| ||||| || || | Sbjct 5107 ACCGCTCAAAATGGCAGCTTGGACAGCAGCACCATAGGCAACAGCCTCATCGGGGTTGAT 5048 Query 281808 -CAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTACCTTAGGA 281866 | || || || | || |||||||| || | ||| | |||| ||||| ||| Sbjct 5047 GCTCTTGCA--AAGCTCCTTGCCATTGAAGAAGTCCTGAAGCAATTGTTGAACCTTGGGA 4990 Query 281867 ATACGAGATGATCCTCCAACTAATACAATTTCATGCA-CCTGTGATTTATCCAGTTTTGA 281925 || | | || || ||||| | |||| ||||| | ||| || |||| || | Sbjct 4989 ATCCTGGTGGAGCCACCAACAAGCACAACATCATGAATACTG-CTCTTGTCCATCTTAGC 4931 Query 281926 ATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTC 281985 ||| ||| || ||||| ||||| | || || || | ||| || || Sbjct 4930 ATCTCTCAAACACTTCTCAACAGGTTCCATACATTTCCTGAAAAGGTCCATGTTGAGCTC 4871 Query 281986 TTCGAATTTAGCTCTAGTAAGAGTGACATTATAA-TCAATTCCTTCGAACAAAGAATCAA 282044 ||||| | || | ||| | ||| | || || ||||| || || | | ||| |||| Sbjct 4870 CTCGAACCTGGCACGAGTGATGGTG-GAGTAGAAGTCAATGCCCTCATAGAGAGAGTCAA 4812 Query 282045 CTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCC 282104 |||||| || ||||| | | ||| || || | | || || | ||||| ||||| | Sbjct 4811 TTTCAATGGTCGTTTGGGCAGTAGATGACAGCGTCCTCTTTGCCCTCTCACAAGCTGTTC 4752 Query 282105 TTAGTCTTC-GTAAGGCTTTTGCTGATTGATTCAAATCTGTTTTATATTTTCTCTTGAAA 282163 | | || | | || | | | | | | | | ||| | |||| || |||||||| Sbjct 4751 TCAATCGCCTGAGAGCCCTGGGGTTA-CCACTTATGTCTTTCTTATTCTTCCTCTTGAAT 4693 Query 282164 TCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTT 282223 || | ||| | | || | | ||| ||||| ||||| ||||| | | || | Sbjct 4692 TCCTGGACAAAGTGGTTCACCATTCTATTGTCAAAGTCTTCCCCTCCAAGATGGGTGTCA 4633 Query 282224 CCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGG 282283 || | ||||| | |||| ||||| || || |||| | | ||| | |||||| | Sbjct 4632 CCAGCAGTAGCCTTCACTTCGAAAATGCCCTCCTCAATTGTAAGAAGGGAGACATCAAAG 4573 Query 282284 GTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTC-TTGG-----TTTTTA 282337 || |||||||| | |||||| || | |||||| | || | ||| || ||| Sbjct 4572 GTACCACCACCAAGATCAAAGATCAACACATTCTTCTCACCAACACTGGTCGCCTTCTTA 4513 Query 282338 TCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGA 282397 || | ||||| |||| ||||| || || || || || || || | || ||||| ||| Sbjct 4512 TCCAAGCCATAGGCAATGGCAGCTGCTGTGGGCTCGTTGATGATACGCATCACATTGAGA 4453 Query 282398 CCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGA 282457 || | ||| || ||||| || || || || | || ||||| || || || || || Sbjct 4452 CCGGAAATAACGCCAGCATCCTTGGTAGCCTGACGCTGGGAATCATTGAAGTAAGCTGGG 4393 Query 282458 ACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATT 282517 || |||| || |||| | | ||| |||| ||| || || |||| ||||| Sbjct 4392 ACGGTAACCACAGCATTTTTCACTGTGGAACCAAGATATGCCTCAGCAGTTTCCTTCATC 4333 Query 282518 TTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTT 282561 ||| | |||| ||| |||||||| | || | ||| |||| || Sbjct 4332 TTAATCAAAACCATGGATGAAATCTCCTCAGCTGAAAATTGTTT 4289 >seq579699 Length=1937 Score = 150 bits (166), Expect = 1e-30 Identities = 337/493 (68%), Gaps = 20/493 (4%) Strand=Plus/Minus Query 281983 TTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAA-TCAATTCCTTCGAACAAAGAAT 282041 ||| |||||| | || | |||| ||| | || || ||||| || ||| ||||||||| Sbjct 1879 TTCCTCGAATCTGGCACGGGTAATGGTGG-AGTAGAAGTCAATGCCCTCGTACAAAGAAT 1821 Query 282042 CAACTTCAATCGTAGTTTG---AGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATG 282098 ||| ||||| || ||||| ||| || || || ||| | | || || | |||||| | Sbjct 1820 CAATCTCAATGGTGGTTTGGGCAGTGGAGGA-GAGAGTCCTCTTT--GCCCTTTCACAAG 1764 Query 282099 CTGTCCTTAGTCTTCGTAAG-GCTTTTGCTGATTG--ATTCAAATCTGTTTTATATTTTC 282155 | || || | ||||| |||| ||| | | |||| | | | ||| |||| | || | Sbjct 1763 CAGTTCTCAATCTTC-TAAGAGCTCTGG--GATTCCCACTGATATCCTTTTTGTTCTTCC 1707 Query 282156 TCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATT 282215 ||||||| || | |||| | | || | | |||||||||||||||||| || | | Sbjct 1706 TCTTGAATTCCTGAACAAAGTGGTTCACCATTCTATTATCAAAATCTTCACCACCAAGGT 1647 Query 282216 TAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAA 282275 || | ||| | || ||| | |||| |||| || || |||| | | ||| | | Sbjct 1646 GGGTGTCTCCAGCAGTTGCTTTGACTTCAAAAATCCCCTCCTCAATGGTTAGAAGCGAGA 1587 Query 282276 CATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGT--CT--TGG 282331 ||||| || ||||| || | ||||| || || |||||| | || | || ||| Sbjct 1586 CATCAAAAGTGCCACCTCCAAGGTCAAATATCAGGACATTCTTCTCACCGCTGCTGCTGG 1527 Query 282332 --TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAA 282389 || || || ||||| || |||| ||||| ||||| || |||||||| || | || | Sbjct 1526 CCTTCTTGTCGAGACCGTAAGCAATGGCAGCTGCAGTAGGCTCATTAATTATACGCATGA 1467 Query 282390 CATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAAT 282449 | || ||||||| || ||| ||||| || ||||| || | || || || || |||| Sbjct 1466 CGTTGAGACCAGAGATCACTCCAGCATCCTTGGTGGCCTGCCGCTGGGAGTCATTGAAAT 1407 Query 282450 ATGCAGGAACAGT 282462 ||||||| ||||| Sbjct 1406 ATGCAGGCACAGT 1394 >seq483499 Length=10500 Score = 129 bits (142), Expect = 4e-24 Identities = 159/216 (74%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 282245 AAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAA 282304 |||| ||||| |||| | ||| | | | ||||| ||||||||||| | ||||| Sbjct 762 AAAACTCCATTATCAATGGTCAAGATACTGACATCGAATGTTCCACCACCAAGGTCAAAG 703 Query 282305 ATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCA 282364 | ||| | |||| |||| ||| | ||||| | ||| || |||| || ||||| Sbjct 702 ACAAGAATATTCTTTTCACCTCCTT---TCTTATCCAAACCGTATGCAATTGCTGCAGCC 646 Query 282365 GTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTG 282424 |||||||||||||||||||||| |||||| | ||||||||| | ||||||||||| || Sbjct 645 GTTGGTTCATTAATAATTCTCACAACATTCAAGCCAGCAATTGTCCCTGCATCTTTGGTT 586 Query 282425 GCTTGTCTTTGTGAATCGTTAAAATA---TGCAGGA 282457 || || ||||| | ||| || || || ||||||| Sbjct 585 GCCTGCCTTTGGGCATCATTGAAGTAAGCTGCAGGA 550 >seq392475 Length=6149 Score = 105 bits (116), Expect = 5e-17 Identities = 178/257 (69%), Gaps = 3/257 (1%) Strand=Plus/Minus Query 282205 ACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGA 282264 ||||||||| | ||||| ||| || || || | || | |||| |||| || Sbjct 3572 ACCTCCCAAATGAGTATCTCCATTTGTTGCAAGCACCTCAAACACACCATTGTCAATAGT 3513 Query 282265 CAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTT 282324 ||| | | | |||||| ||||||||||| | ||||| | || | ||| |||| Sbjct 3512 CAAGATACTGACATCAAAAGTTCCACCACCAAGGTCAAAGACCAGGATGTTCTTTTCACC 3453 Query 282325 GTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCT 282384 | | | || || | ||| || |||| || ||||| ||||||||||| |||||||| Sbjct 3452 ACCCT---TCTTGTCCAAACCGTATGCAATTGCTGCAGCGGTTGGTTCATTTATAATTCT 3396 Query 282385 CAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTT 282444 | ||||| || |||||||| | || ||||| |||||||||||||| || | ||| || Sbjct 3395 GACCACATTCAGCCCAGCAATAGTGCCAGCATCCTTAGTGGCTTGTCTCTGAGCATCATT 3336 Query 282445 AAAATATGCAGGAACAG 282461 || || || | || || Sbjct 3335 GAAGTAAGCTGCAAGAG 3319 >seq339340 Length=776 Score = 105 bits (116), Expect = 5e-17 Identities = 133/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 282698 GTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTC 282757 || ||||| || || | || | |||| || ||||| ||||| |||||| | || || Sbjct 731 GTGTTGGTAGGGTTCATGGCGACCTGATTCTTCGCTGCGTCTCCGATCAGACGCTCGGTA 672 Query 282758 TCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCA 282817 || || || | ||||| || || || ||||| ||||||||||||||||| || || ||| Sbjct 671 TCGGTGAAAGCCACATACGACGGCGTCGTGCGGTTACCTTGATCATTCGCGATGATCTCA 612 Query 282818 ACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATA 282877 || || ||| ||||| || || ||||| | || ||||| ||||| || ||||| Sbjct 611 ACCCTATCATGCTGCCAAACTCCCACACACGAGTATGTGGTTCCCAAATCGATTCCAATC 552 Query 282878 GCA 282880 ||| Sbjct 551 GCA 549 >seq650005 Length=3068 Score = 104 bits (114), Expect = 2e-16 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 || |||| | |||||| | | |||||||||||| || ||||| ||||||||| ||| Sbjct 2541 TTGTTATTCATACCATAGGACAGAGCAGCAGCAGTAGGCTCATTGATAATTCTCTGCACA 2600 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 | ||| ||||| || ||||| ||||| ||||| ||||| | || | ||| |||||||| Sbjct 2601 TCAAGGCCAGCTATCCTTCCAGCATCCTTAGTAGCTTGCCGCTGGGCATCATTAAAATAG 2660 Query 282452 GCAGGAACAGTAATAACGGC 282471 || || || ||||| || || Sbjct 2661 GCTGGTACTGTAATGACAGC 2680 >seq567771 Length=2768 Score = 102 bits (112), Expect = 6e-16 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 || || |||| ||||| || |||| |||||| || |||||||||||||||| | |||| Sbjct 869 TTCTTCTCAAACCCATATGCCAAAGAAGCAGCGGTGGGTTCATTAATAATTCGGAGAACA 810 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 | | |||||| || | || |||||||| || || ||| || || ||||| ||||| Sbjct 809 TCCAAACCAGCTATACGGCCAGCATCTTTTGTTGCAGTTCTCTGGGAGTCGTTGAAATAG 750 Query 282452 GCAGGAACAGTAATAACGGCATCTGTTAC 282480 || || |||||||| || || | ||||| Sbjct 749 GCGGGCACAGTAATCACTGCTTTAGTTAC 721 >seq733272 Length=3804 Score = 100 bits (110), Expect = 2e-15 Identities = 111/146 (76%), Gaps = 3/146 (2%) Strand=Plus/Plus Query 282326 TCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTC 282385 |||| ||| || |||| ||||| | || ||||| || || || ||||||||||| || Sbjct 2062 TCTTTGTTGTT--CAAG-CCATAAGAAAGTGCAGCGGCTGTGGGCTCATTAATAATCCTT 2118 Query 282386 AAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTA 282445 |||| |||||| || ||||| || |||||||| |||||||| || || | ||| ||| Sbjct 2119 TGTACATCAAGACCCGCTATTCTGCCAGCATCTTTGGTGGCTTGCCTCTGAGCATCATTA 2178 Query 282446 AAATATGCAGGAACAGTAATAACGGC 282471 ||||| || ||||| || || || || Sbjct 2179 AAATACGCCGGAACCGTGATCACAGC 2204 >seq335363 Length=923 Score = 95.1 bits (104), Expect = 9e-14 Identities = 136/189 (72%), Gaps = 6/189 (3%) Strand=Plus/Plus Query 282274 AACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTT 282333 ||||||| || ||||| || | ||||||| ||| | | |||| ||| ||| || Sbjct 164 AACATCAAAAGTGCCACCTCCAAGGTCAAAAACAAGAA---TTGTTTCATTG-CTT--TT 217 Query 282334 TTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATT 282393 || |||| |||||| || || | |||||||||||||| || ||||| | | ||| | Sbjct 218 CTTTTCAAAACCATAGGCCAAGGATGCAGCAGTTGGTTCGTTTATAATACGGAGAACCTC 277 Query 282394 AAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGC 282453 | ||||||||| | || ||||| || || || ||| || ||||| || || ||||| Sbjct 278 TAAACCAGCAATACGACCAGCATCCTTGGTTGCAGTTCTCTGAGAATCATTGAAGTATGC 337 Query 282454 AGGAACAGT 282462 |||||| || Sbjct 338 AGGAACTGT 346 >seq663505 Length=2050 Score = 93.3 bits (102), Expect = 3e-13 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 282671 CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTG 282730 || || || || || || ||||||| ||| || ||||| | || | |||| ||| Sbjct 2043 CCGATCAAACGCTTGGCGTCAAAAACAGTGTTCTGCGGATTCATCGCGACCTGATTCTTG 1984 Query 282731 GCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGA 282790 || || || || || || | || || || || || | |||||| |||||||| || | Sbjct 1983 GCGGCGTCGCCTATGAGGCGCTCGGTGTCGGTGAAGGCAACATAGGATGGAGTGGTCCTG 1924 Query 282791 TTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTA 282850 || ||||||||||| | ||||||||| || | | || ||||| | || || || || Sbjct 1923 TTGCCTTGATCATTGGGAATAATTTCGACACGATCGTTCTGCCAGATGCCAACGCAGCTG 1864 Query 282851 AAAGTTGTTCCTAAATCAATACCAATAGC 282879 | || || || | |||||| |||||||| Sbjct 1863 TAGGTGGTGCCGAGATCAATTCCAATAGC 1835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3701634215861088