Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ruellia_20speciosa_20[genbank_20GCA_5F001909325.1_202016-12-20] 794,288 sequences; 740,035,655 total letters Query= NC_026928.1 Length=189418 Score E Sequences producing significant alignments: (Bits) Value seq784841 504 9e-138 seq585748 479 3e-130 seq492030 313 3e-80 seq585752 309 4e-79 seq585461 279 6e-70 seq572160 113 5e-20 seq559756 93.3 5e-14 >seq784841 Length=3474 Score = 504 bits (558), Expect = 9e-138 Identities = 703/980 (72%), Gaps = 4/980 (0%) Strand=Plus/Minus Query 177849 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 177908 ||||| | ||| |||| ||| | ||||| || || | || ||| | || || || Sbjct 2998 TTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGGTTGGTGTTTTG 2939 Query 177909 ATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 177967 ||||| || || | ||| | |||||| ||||| || || | |||||| | | |||||| Sbjct 2938 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATTGCCTTCATTGTTGCTCC 2880 Query 177968 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGCAACAA 178027 || ||||| || || || || |||||||| || |||| || || | ||||| ||| | Sbjct 2879 TCCAGTGGATATTGATGGTATTCGTGAACCTGTTTCTGGGTCTCTACTTTATGGAAACGA 2820 Query 178028 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 178087 || ||||| ||||| || |||| |||| || || ||| | || || || || || Sbjct 2819 TATTATCTCAGGTGCCATTATTCCTACTTCTGCAGCTATCGGTTTGCATTTTTACCCAAT 2760 Query 178088 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 178147 ||||||||| |||| ||||||||||| | || ||| ||||||||| |||| | || Sbjct 2759 CTGGGAAGCAACATCCGTTGATGAGTGGTTATACAACTGTGGTCCTTATGAACTAATTGT 2700 Query 178148 ATTTCACTTCCTCATTGGTATCTATGCATACATGGGACGTGAGTGGGAACTTTCATACCG 178207 | |||||| | ||||| | | |||||||| |||||||||||| || | ||| Sbjct 2699 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAAATTAGTTTCCG 2640 Query 178208 TTTAGGTATGCGCCCCTGGATCTGTGTAGCATACTCTGCTCCAGTAGCAGCAGC-ATCGG 178266 | | |||||||| || ||||| | | ||||| | |||| || ||||| || |||| Sbjct 2639 TCTGGGTATGCGACCTTGGATTGCTTTTGCATATTTAACTCCTGTTGCAGCTGCTATCG- 2581 Query 178267 CAGTATTCCTGGTCTATCCTTTCGGTCAAGGTTCATTTTCTGACGCAATGCCACTTGGCA 178326 | || ||| || |||| || | |||||||| |||||||| | ||||| || || | Sbjct 2580 CTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAA 2521 Query 178327 TCTCTGGTACATTCAACTACATGCTTGTTTTCCAAGCAGAACACAACATTCTGATGCACC 178386 | |||||||| ||||||| ||| |||| |||||||| || |||||||| || ||||||| Sbjct 2520 TTTCTGGTACTTTCAACTTTATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACC 2461 Query 178387 CCTTCCACATGTTGGGTGTCGCAGGTGTATTCGGTGGTTCACTGTTCAGTGCAATGCACG 178446 | || |||||||| || || || ||||||||||| || || || |||| ||| ||||| | Sbjct 2460 CATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAATGCTATGCATG 2401 Query 178447 GTTCTTTGGTTACATCTTCACTCGTTCGTGAAACGACTGAAACAGAATCACAGAACTATG 178506 |||| ||| | || ||| | | | ||||| || |||| ||||| || | | Sbjct 2400 GTTCCTTGATAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTACTAATGAAG 2341 Query 178507 GTTATAAGTTCGGACAAGAAGAAGAGACATACAACATCGTTGCAGCACATGGCTACTTCG 178566 |||| || || || ||||| ||||| || || || || || || || ||||| || || | Sbjct 2340 GTTACAAATTTGGTCAAGAGGAAGAAACTTATAATATTGTAGCCGCTCATGGTTATTTTG 2281 Query 178567 GTCGTTTGATCTTCCAATATGCTTCATTCAACAACTCACGTTCACTGCACTTCTTCCTCG 178626 | || |||| ||||||||| || || |||||||| |||||| | ||||||||| | | Sbjct 2280 GCCGACTGATATTCCAATATACTAGTTTTAACAACTCTCGTTCATTACACTTCTTCTTAG 2221 Query 178627 CAGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTGGGCGTAAGCACCATGGCATTTA 178686 | || ||||||||||| || ||||||||||| || | || | ||||| ||||| || | Sbjct 2220 CTGCTTGGCCTGTAGTGGGTATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCA 2161 Query 178687 ACCTCAATGGATTCAACTTCAACCAGTCCATCCTCGACGGACAAGGACGTGTCCTCAACA 178746 || | || || ||||| ||| |||| || | | || | ||||| ||||| | || | Sbjct 2160 ACTTAAACGGTTTCAATTTCTACCAATCTGTAGTTGATAGTCAAGGCCGTGTAATTAATA 2101 Query 178747 CATGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAGCGCAACG 178806 | ||||| || | |||| ||||| || || ||||||| ||||| || || || | Sbjct 2100 CTTGGGCTGATATCATCAATCGTGCTAACCTTGGTCTGGAAGTTATGCATGAACGTAATG 2041 Query 178807 CGCACAACTTCCCGCTTGAT 178826 | || |||||||| || ||| Sbjct 2040 CTCATAACTTCCCTCTGGAT 2021 >seq585748 Length=906 Score = 479 bits (530), Expect = 3e-130 Identities = 608/834 (73%), Gaps = 2/834 (0%) Strand=Plus/Minus Query 177870 ACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCA 177929 ||| | ||||| || || | || ||||| || || ||||||| || || | ||| | Sbjct 834 ACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACC 775 Query 177930 GCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCAT 177988 |||||| | ||| || || | || ||| | ||||||| || ||||| || || || || Sbjct 774 GCAACTTT-TGTATTTATTATTGCTTTCATTACTGCTCCTCCAGTGGATATTGATGGTAT 716 Query 177989 CCGTGAACCCGTCGCTGGTTCACTCATGTATGGCAACAACATCATCTCTGGTGCAGTTGT 178048 |||||||| || |||| || || | || || ||||| || ||||| ||||| || | Sbjct 715 TCGTGAACCTGTTTCTGGGTCTCTACTTTACGGAAACAATATTATCTCAGGTGCCATTAT 656 Query 178049 TCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGA 178108 ||| |||| ||||| | | | || || || || ||||||||||| ||||| |||| Sbjct 655 TCCTACTTCTGCAGCAATCGATTTGCATTTTTACCCAATCTGGGAAGCAGCATCCGTTGA 596 Query 178109 TGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGTATTTCACTTCCTCATTGGTAT 178168 ||||||| | || ||||||||||||| |||| | || | ||| || | ||||| | Sbjct 595 TGAGTGGTTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACATCTTACTTGGTGT 536 Query 178169 CTATGCATACATGGGACGTGAGTGGGAACTTTCATACCGTTTAGGTATGCGCCCCTGGAT 178228 | |||||||| ||||||||||||||| | |||| | |||||||| || ||||| Sbjct 535 AGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGACCTTGGAT 476 Query 178229 CTGTGTAGCATACTCTGCTCCAGTAGCAGCAGCATCGGCAGTATTCCTGGTCTATCCTTT 178288 ||| ||||| || ||||| || ||||| | | || || ||| || |||| || | Sbjct 475 TGCTGTTGCATATTCAGCTCCTGTTGCAGCTGTTACTGCTGTTTTCTTGATCTACCCAAT 416 Query 178289 CGGTCAAGGTTCATTTTCTGACGCAATGCCACTTGGCATCTCTGGTACATTCAACTACAT 178348 ||||||||| |||||||| | ||||| || || || |||||||| ||||||| || Sbjct 415 CGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTTAT 356 Query 178349 GCTTGTTTTCCAAGCAGAACACAACATTCTGATGCACCCCTTCCACATGTTGGGTGTCGC 178408 | |||| ||||| || || |||||||| || |||||||| || |||||||| || || || Sbjct 355 GATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGC 296 Query 178409 AGGTGTATTCGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGTTACATCTTCACT 178468 ||||||||||| || || || |||||| | ||||| ||||| ||||| | ||| | Sbjct 295 TGGTGTATTCGGCGGCTCCCTATTCAGTTCTATGCATGGTTCCTTGGTAAGTTCTAGTTT 236 Query 178469 CGTTCGTGAAACGACTGAAACAGAATCACAGAACTATGGTTATAAGTTCGGACAAGAAGA 178528 | | ||||| || |||| ||||| || | ||||| || || || ||||| || Sbjct 235 GATCAGGGAAACCACAGAAAATGAATCCGCTAATGAAGGTTACAAATTTGGTCAAGAGGA 176 Query 178529 AGAGACATACAACATCGTTGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATATGC 178588 ||| || || || || || || || ||||| || || || || |||||||||||| ||| Sbjct 175 AGAAACTTATAATATTGTAGCCGCTCATGGTTATTTTGGCCGACTGATCTTCCAATTTGC 116 Query 178589 TTCATTCAACAACTCACGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAAT 178648 | ||||||||||| |||||| | ||||||||||| || || ||||||||||| || || Sbjct 115 TAGTTTCAACAACTCTCGTTCATTACACTTCTTCCTAGCTGCTTGGCCTGTAGTGGGTAT 56 Query 178649 CTGGTTCACCGCACTGGGCGTAAGCACCATGGCATTTAACCTCAATGGATTCAA 178702 || |||||| || | || | ||||| ||||| || ||| | || || ||||| Sbjct 55 CTAGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAACTTAAACGGTTTCAA 2 >seq492030 Length=881 Score = 313 bits (346), Expect = 3e-80 Identities = 359/483 (74%), Gaps = 0/483 (0%) Strand=Plus/Plus Query 178288 TCGGTCAAGGTTCATTTTCTGACGCAATGCCACTTGGCATCTCTGGTACATTCAACTACA 178347 |||||||||| |||||||| | ||||| || || || |||||||| ||||||| | Sbjct 399 TCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTTA 458 Query 178348 TGCTTGTTTTCCAAGCAGAACACAACATTCTGATGCACCCCTTCCACATGTTGGGTGTCG 178407 || |||| ||| | || || |||||||| || |||||||| || |||||||| || || | Sbjct 459 TGATTGTATTCTAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAG 518 Query 178408 CAGGTGTATTCGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGTTACATCTTCAC 178467 | ||||||||||| || || || |||||||| ||||| | ||| ||||| || ||| Sbjct 519 CTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGATTCCTTGGTAACTTCTAGTT 578 Query 178468 TCGTTCGTGAAACGACTGAAACAGAATCACAGAACTATGGTTATAAGTTCGGACAAGAAG 178527 | | | ||||| || |||| ||||| || | ||||| || || || ||||| | Sbjct 579 TGATCAGGGAAACCACAGAAAATGAATCCGCTAATGAAGGTTACAAATTTGGTCAAGAGG 638 Query 178528 AAGAGACATACAACATCGTTGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATATG 178587 |||| || || || || || || || ||||| || || || || ||||||||||||||| Sbjct 639 AAGAAACTTATAATATTGTAGCCGCTCATGGTTATTTTGGCCGACTGATCTTCCAATATG 698 Query 178588 CTTCATTCAACAACTCACGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAA 178647 || ||||||||||| |||||| | ||||||||||| || || ||||||||||| || | Sbjct 699 CTAGTTTCAACAACTCTCGTTCATTACACTTCTTCCTAGCTGCTTGGCCTGTAGTGGGTA 758 Query 178648 TCTGGTTCACCGCACTGGGCGTAAGCACCATGGCATTTAACCTCAATGGATTCAACTTCA 178707 |||||||||| || | || | ||||| ||||| || ||| | || || ||||| |||| Sbjct 759 TCTGGTTCACTGCTTTAGGTATTAGCACTATGGCCTTCAACTTAAACGGTTTCAATTTCA 818 Query 178708 ACCAGTCCATCCTCGACGGACAAGGACGTGTCCTCAACACATGGGCAGACGTGCTCAACC 178767 |||| || | | || | ||||| ||||| | || || ||||| || | |||| | Sbjct 819 ACCAATCTGTAGTTGATAGTCAAGGCCGTGTAATTAATACTTGGGCTGATATCATCAATC 878 Query 178768 GTG 178770 ||| Sbjct 879 GTG 881 >seq585752 Length=1498 Score = 309 bits (342), Expect = 4e-79 Identities = 467/660 (71%), Gaps = 3/660 (0%) Strand=Plus/Minus Query 178176 TACATGGGACGTGAGTGGGAACTTTCATACCGTTTAGGTATGCGCCCCTGGATCTGTGTA 178235 |||||||| | ||||||||||||| | || | | |||||||| | ||||| ||| Sbjct 1471 TACATGGGTCATGAGTGGGAACTTAGTTTCCTTCTGGGTATGCGATCTTGGATTGTTGTT 1412 Query 178236 GCATACTCTGCTCCAGTAGCAGCAGCATCGGCAGTATTCCTGGTCTATCCTTTCGGTCAA 178295 ||||| || |||| | |||| || | | || ||| | |||| | |||||||| Sbjct 1411 GCATATTCAGCTCTTGCTACAGCTGCTACCGTTGTTTTCTTAATCTACCAGATCGGTCAA 1352 Query 178296 GGTTCATTTTCTGACGCAATGCCACTTGGCATCTCTGGTACATTCAACTACATGCTTGTT 178355 || |||||||| | ||||| || || || |||||||| ||||||| ||| |||| Sbjct 1351 GGAAGTTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTTATGATTGTA 1292 Query 178356 TTCCAAGCAGAACACAACATTCTGATGCACCCCTTCCACATGTTGGGTGTCGCAGGTGTA 178415 ||||| || | |||||||| || |||||||| || |||||||| ||||| || |||||| Sbjct 1291 TTCCAGGCTAAGCACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTA 1232 Query 178416 TTCGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTTCGT 178475 ||||| || || | |||| ||| ||| | ||||| || || || ||| | || | Sbjct 1231 TTCGGCGGCTCCTTATTCAATGCTATGAATGGTTCCTTTGTAACTTCTAGTTTGATTAGG 1172 Query 178476 GAAACGACTGAAACAGAATCACAGAACT-ATGGTTATAAGTTCGGACAAGAAGAAGAGAC 178534 ||||| || |||| ||||| || | | | ||||| || | || ||||| ||||| || Sbjct 1171 GAAACCACAGAAAATGAATC-CACTAGTGAAGGTTACAAATGTGGTCAAGAGGAAGAAAC 1113 Query 178535 ATACAACATCGTTGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATATGCTTCATT 178594 || || || || || || ||||| || || ||||| |||||||||||||| || || Sbjct 1112 TTATAATATTGTAGCCGCTCATGGTTATTTTGGTCGACTGATCTTCCAATATACTAGTTT 1053 Query 178595 CAACAACTCACGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAATCTGGTT 178654 ||||||||| |||||| | ||||||||||| || | ||||||||| | || ||| ||| Sbjct 1052 CAACAACTCTCGTTCATTACACTTCTTCCTAGCTTCTTGGCCTGTACTAGGTGTCTAGTT 993 Query 178655 CACCGCACTGGGCGTAAGCACCATGGCATTTAACCTCAATGGATTCAACTTCAACCAGTC 178714 ||| | | || | | || |||| || ||| | || | ||||| |||||||| || Sbjct 992 CACTACTTTAGGTATTACAACTATGGTTTTCAACTTAAACGATTTCAATTTCAACCAATC 933 Query 178715 CATCCTCGACGGACAAGGACGTGTCCTCAACACATGGGCAGACGTGCTCAACCGTGCCGG 178774 || | || | ||||| ||| | | || || | ||| || | |||| ||||| Sbjct 932 TATAGTTGATAGCCAAGGCCGT-TAATTAATACTTAGGCTGATATCATCAATCGTGCTAA 874 Query 178775 TCTCGGCATGGAAGTCATGCACGAGCGCAACGCGCACAACTTCCCGCTTGATCTTGCAGC 178834 || || |||||||| ||||| || | || || |||||||| || ||| | || || Sbjct 873 CCTTGGTATGGAAGTTATGCATGAAACTCATGCTCATAACTTCCCTCTAGATTTAGCTGC 814 >seq585461 Length=917 Score = 279 bits (308), Expect = 6e-70 Identities = 397/556 (71%), Gaps = 2/556 (0%) Strand=Plus/Minus Query 179678 TTGGTTTTTCGCGCCGTCCTTTGGTGTCGCGGCGATCTTCAGGTTCTTGCTGTTCCTTCA 179737 |||||| || || || |||||||| || || || || | ||| | || || |||| Sbjct 915 TTGGTTCTTTGCACCTAGTTTTGGTGTAGCAGCTATATTTCGATTCATCCTCTTTTTTCA 856 Query 179738 GGGTTTCCACAACTGGACGCTCAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGG 179797 || || || || ||||| || ||||| || ||||||||||||||||||||| || | || Sbjct 855 AGGATTTCATAATTGGACTCTGAACCCATTTCATATGATGGGAGTTGCTGGTGTATTGGG 796 Query 179798 AGGAGCACTGCTCAGTGCTATCCATGGAGTTACTGTAGAGAATACATTGTATGAAGATGG 179857 | || | || ||||||| ||||| | ||| ||||| ||||| || | ||||||||| Sbjct 795 GGCTGCTTTACTATGTGCTATTCATGGTGCTACCGTAGAAAATACTTTATTTGAAGATGG 736 Query 179858 AGAACAAGCAAATACCTTTAAGGCGTTTGATTCGACACAGGAAGAAGAGACTTATTCTAT 179917 || |||||||| || || ||| | | || || | ||||| |||||||| || Sbjct 735 TGATGGCGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCCAT 676 Query 179918 GGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCATTTTCTAACAAGCGGTG 179977 |||||| || |||||||| ||||| || ||||| || |||| ||||| || | || || Sbjct 675 GGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATACACGTTG 616 Query 179978 GCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCAT 180037 | | ||||| || ||||| ||||| || || | ||| |||||| || |||| || Sbjct 615 GTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGG-AT 557 Query 180038 TA-TTGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTAAGTCAGGAGATCAGAGCAG 180096 || | ||| | || || ||||| ||||| || || ||||| ||| || || | || | Sbjct 556 TAGTCGGTTTGGCCCTGAACCTACGTGCCTATGACTTCGTTTCTCAAGAAATTCGTGCCG 497 Query 180097 CAGAAGATCCCGAGTTTGAGACCTTCTACACCAAGAACATTCTTCTCAATGAAGGACTAC 180156 | |||||||| || |||||||| |||||||| || || ||||| | || ||||| | | Sbjct 496 CGGAAGATCCGGAATTTGAGACTTTCTACACAAAAAAAATTCTATTAAACGAAGGTATTC 437 Query 180157 GTGCATGGTTGGCACCAGTTGATCAACCACATGAGTCATTCGTATTCCCAGAAGAAGTTC 180216 |||| ||| |||| | ||||| || ||||| | |||||||| || || ||| Sbjct 436 GTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGCTTC 377 Query 180217 TGCCAAGAGGTAATGC 180232 | ||| | || || || Sbjct 376 TACCACGTGGAAACGC 361 >seq572160 Length=4591 Score = 113 bits (124), Expect = 5e-20 Identities = 149/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 178383 CACCCCTTCCACATGTTGGGTGTCGCAGGTGTATTCGGTGGTTCACTGTTCAGTGCAATG 178442 ||||| || |||||||| || || || ||||||||||| || || || ||||||| ||| Sbjct 4222 CACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGTTATG 4281 Query 178443 CACGGTTCTTTGGTTACATCTTCACTCGTTCGTGAAACGACTGAAACAGAATCACAGAAC 178502 || ||||| ||||| || ||| | | | ||||| | |||| ||||| || Sbjct 4282 CATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCATAGAAAATGAATCCGCTAAT 4341 Query 178503 TATGGTTATAAGTTCGGACAAGAAGAAGAGACATACAACATCGTTGCAGCACATGGCTAC 178562 | ||||| || || || ||||| ||||| || || | || || || || ||||| || Sbjct 4342 GAAGGTTACAAATTTGGTCAAGAGGAAGAAACTTATAGTATTGTAGCCGCTCATGGTTAT 4401 Query 178563 TTCGGTCGTTTGATCTTCCAATATGCT 178589 || || | ||||||||||||||||| Sbjct 4402 TTTGGCCAACTGATCTTCCAATATGCT 4428 >seq559756 Length=2000 Score = 93.3 bits (102), Expect = 5e-14 Identities = 134/185 (72%), Gaps = 3/185 (2%) Strand=Plus/Plus Query 179473 AGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCACG 179532 |||||| ||| | || ||||| ||| | || | || |||| ||| || || || || | Sbjct 1412 AGGGGATTTTACT-CGTTGGTGTCAATTAGGCAGTCTGTGGACTTTTGTTGCCCTGCATG 1470 Query 179533 GTGCCTTCGCTCTCATTGGTTTCATGCTTAGGCAATTTGAACTTGCTCGC-CTGATTGGT 179591 | || |||| || || ||||||||| | | |||||||| |||||||| ||| | | Sbjct 1471 GCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAGCTTGCTCGATCTGTTCAAT 1530 Query 179592 ATCAGACCTTACAATGCGATTGCTTTTTCTGGTCCTATTGCTGTATTCGTCAGTGTTTTC 179651 | ||||||| || || || || ||||||||||| |||||||| || || ||| ||| Sbjct 1531 TGC-GACCTTATAACGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTC 1589 Query 179652 CTCAT 179656 || || Sbjct 1590 CTGAT 1594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 599992773085440