Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ruellia_20speciosa_20[genbank_20GCA_5F001909325.1_202016-12-20] 794,288 sequences; 740,035,655 total letters Query= NC_031935.1 Length=186386 Score E Sequences producing significant alignments: (Bits) Value seq784841 596 2e-165 seq585748 540 1e-148 seq585752 370 1e-97 seq492030 354 1e-92 seq585461 315 8e-81 seq567144 138 1e-27 seq572160 131 2e-25 seq623142 127 2e-24 seq631999 118 1e-21 seq789569 116 4e-21 seq559756 105 8e-18 seq375883 102 1e-16 seq553985 93.3 5e-14 seq572830 91.5 2e-13 seq789568 87.8 2e-12 seq553969 86.0 7e-12 seq9763 82.4 9e-11 >seq784841 Length=3474 Score = 596 bits (660), Expect = 2e-165 Identities = 725/980 (74%), Gaps = 6/980 (1%) Strand=Plus/Minus Query 177598 TTCTGTAACTGGGTAACCTCCACCAACAATCGTCTGTATGTCGGTTGGTTCGGTGTCCTG 177657 |||||||||||| ||||| |||| | || ||||| || | || ||| | ||||| || Sbjct 2998 TTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGGTTGGTGTTTTG 2939 Query 177658 ATGATCCCTACGCTGCTCGCTGCTGCTATCTGT-TTCATCGTCGCTTTCGTCGCTGCTCC 177716 ||||||||||| | | | || || ||||| || || | || ||| | | |||||| Sbjct 2938 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATTGCCTTCATTGTTGCTCC 2880 Query 177717 TCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCCCTGATGTATGGCAACAA 177776 ||| ||||| || || || || |||||||| || |||| || || | ||||| ||| | Sbjct 2879 TCCAGTGGATATTGATGGTATTCGTGAACCTGTTTCTGGGTCTCTACTTTATGGAAACGA 2820 Query 177777 CATCATTTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATTGGTCTCCACTTCTATCCCAT 177836 || || || ||||| || ||||| ||||| ||||| ||| | || || || || || Sbjct 2819 TATTATCTCAGGTGCCATTATTCCTACTTCTGCAGCTATCGGTTTGCATTTTTACCCAAT 2760 Query 177837 CTGGGAAGCAGCTTCTCTCGATGAGTGGCTCTACAATGGTGGTCCTTTCCAACTCGTTAT 177896 |||||||||| | || | ||||||||| | ||||| ||||||||| |||| || | Sbjct 2759 CTGGGAAGCAACATCCGTTGATGAGTGGTTATACAACTGTGGTCCTTATGAACTAATTGT 2700 Query 177897 CTTCCACTTCCTGATCGGTATCTATGCATACATGGGTCGTGAGTGGGAACTTTCTTACCG 177956 | |||||| | | ||| | | ||||||||||||||||||||| || || ||| Sbjct 2699 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAAATTAGTTTCCG 2640 Query 177957 CCTAGGTATGCGTCCCTGGATCTGTGTAGCATACTCTGCTCCAGTCGCCGCAGC-ATCTG 178015 || |||||||| || ||||| | | ||||| | |||| || || || || ||| | Sbjct 2639 TCTGGGTATGCGACCTTGGATTGCTTTTGCATATTTAACTCCTGTTGCAGCTGCTATC-G 2581 Query 178016 CTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCTATGCCCCTGGGTA 178075 |||| ||| | | || || | |||||||| ||| ||||| | |||||| || || | Sbjct 2580 CTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAA 2521 Query 178076 TCAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACC 178135 | ||| || ||||||| ||| |||| |||||||| |||||||||||||| ||||||| Sbjct 2520 TTTCTGGTACTTTCAACTTTATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACC 2461 Query 178136 CCTTCCACATGTTGGGCGTCGCTGGTGTCTTTGGTGGTTCTCTGTTCAGTGCGATGCACG 178195 | || |||||||| ||||| |||||||| || || || || || |||| ||| ||||| | Sbjct 2460 CATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAATGCTATGCATG 2401 Query 178196 GTTCTCTGGTTACTTCCTCGCTGGTTC-GTGAAACCACCGAGAACGAAAGTCAGAACTAT 178254 |||| || | ||||| | | | | || | |||||||| || || ||| | || | Sbjct 2400 GTTCCTTGATAACTTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTACTAATGAA 2342 Query 178255 GGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCTCATGGTTACTTC 178314 |||||||| || |||||||| ||||| || || || || || || ||||||||||| || Sbjct 2341 GGTTACAAATTTGGTCAAGAGGAAGAAACTTATAATATTGTAGCCGCTCATGGTTATTTT 2282 Query 178315 GGTCGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCTC 178374 || || ||||| |||||||| | || |||||||| ||||| | ||||||||| | Sbjct 2281 GGCCGACTGATATTCCAATATACTAGTTTTAACAACTCTCGTTCATTACACTTCTTCTTA 2222 Query 178375 GCAGCATGGCCTGTTGTCGGTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTC 178434 || || |||||||| || |||||||||||||||||| | ||| ||||||| ||||| ||| Sbjct 2221 GCTGCTTGGCCTGTAGTGGGTATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTC 2162 Query 178435 AACCTCAACGGTTTCAACTTCAACCAGTCCATCATGGATAGTCAGGGCAAAGTCCTGAAC 178494 ||| | ||||||||||| ||| |||| || | | |||||||| ||| || | || Sbjct 2161 AACTTAAACGGTTTCAATTTCTACCAATCTGTAGTTGATAGTCAAGGCCGTGTAATTAAT 2102 Query 178495 ACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGTATGGAAGTCATGCACGAGCGTAAT 178554 || ||||| || | |||| |||||| |||||| ||||||| ||||| || |||||| Sbjct 2101 ACTTGGGCTGATATCATCAATCGTGCTAACCTTGGTCTGGAAGTTATGCATGAACGTAAT 2042 Query 178555 GCTCACAACTTCCCTCTTGA 178574 ||||| ||||||||||| || Sbjct 2041 GCTCATAACTTCCCTCTGGA 2022 >seq585748 Length=906 Score = 540 bits (598), Expect = 1e-148 Identities = 639/858 (74%), Gaps = 8/858 (1%) Strand=Plus/Minus Query 177598 TTCTGTAACTGGGTAACCTCCACCAACAATCGTCTGTATGTCGGTTGGTTCGGTGTCCTG 177657 |||||||||| | ||||| |||| | || ||||| || | || ||||| ||||| || Sbjct 855 TTCTGTAACTCGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 796 Query 177658 ATGATCCCTACGCTGCTCGCTGCTGCTATCTGT-TTCATCGTCGCTTTCGTCGCTGCTCC 177716 ||||||||||| | | | || || | ||| || || | |||||| | ||||||| Sbjct 795 ATGATCCCTACCTTATTGACCGCAACTTT-TGTATTTATTATTGCTTTCATTACTGCTCC 737 Query 177717 TCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCCCTGATGTATGGCAACAA 177776 ||| ||||| || || || || |||||||| || |||| || || | || || ||||| Sbjct 736 TCCAGTGGATATTGATGGTATTCGTGAACCTGTTTCTGGGTCTCTACTTTACGGAAACAA 677 Query 177777 CATCATTTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATTGGTCTCCACTTCTATCCCAT 177836 || || || ||||| || ||||| ||||| || || | | | || || || || || Sbjct 676 TATTATCTCAGGTGCCATTATTCCTACTTCTGCAGCAATCGATTTGCATTTTTACCCAAT 617 Query 177837 CTGGGAAGCAGCTTCTCTCGATGAGTGGCTCTACAATGGTGGTCCTTTCCAACTCGTTAT 177896 |||||||||||| || | ||||||||| | ||||| |||||||||| |||| || | Sbjct 616 CTGGGAAGCAGCATCCGTTGATGAGTGGTTATACAACGGTGGTCCTTATGAACTAATTGT 557 Query 177897 CTTCCACTTCCTGATCGGTATCTATGCATACATGGGTCGTGAGTGGGAACTTTCTTACCG 177956 | ||| || | | ||| | | |||||||||||||||||||||||| || ||| Sbjct 556 TCTACACATCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCG 497 Query 177957 CCTAGGTATGCGTCCCTGGATCTGTGTAGCATACTCTGCTCCAGTCGCCGCAGCATCTGC 178016 || |||||||| || ||||| ||| ||||| || ||||| || || || | |||| Sbjct 496 TCTGGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGTTACTGC 437 Query 178017 TGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCTATGCCCCTGGGTAT 178076 ||| ||| | | || || |||||||||| ||| ||||| | |||||| || || || Sbjct 436 TGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAAT 377 Query 178077 CAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCC 178136 ||| || ||||||| ||| |||| ||||| || |||||||||||||| |||||||| Sbjct 376 TTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCC 317 Query 178137 CTTCCACATGTTGGGCGTCGCTGGTGTCTTTGGTGGTTCTCTGTTCAGTGCGATGCACGG 178196 || |||||||| ||||| |||||||| || || || || || |||||| | ||||| || Sbjct 316 ATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTTCTATGCATGG 257 Query 178197 TTCTCTGGTTACTTCCTCGCTGGTTC-GTGAAACCACCGAGAACGAAAGTCAG--AACTA 178253 ||| |||| | ||| | | | | || | |||||||| || || ||| || | || | Sbjct 256 TTCCTTGGTAAGTTC-TAGTTTGATCAGGGAAACCACAGAAAATGAA--TCCGCTAATGA 200 Query 178254 TGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCTCATGGTTACTT 178313 |||||||| || |||||||| ||||| || || || || || || ||||||||||| || Sbjct 199 AGGTTACAAATTTGGTCAAGAGGAAGAAACTTATAATATTGTAGCCGCTCATGGTTATTT 140 Query 178314 CGGTCGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCT 178373 || || ||||||||||||| || ||||||||||| ||||| | ||||||||||| Sbjct 139 TGGCCGACTGATCTTCCAATTTGCTAGTTTCAACAACTCTCGTTCATTACACTTCTTCCT 80 Query 178374 CGCAGCATGGCCTGTTGTCGGTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATT 178433 || || |||||||| || ||||||| |||||||||| | ||| ||||||| ||||| || Sbjct 79 AGCTGCTTGGCCTGTAGTGGGTATCTAGTTCACTGCTTTAGGTATTAGCACTATGGCTTT 20 Query 178434 CAACCTCAACGGTTTCAA 178451 |||| | ||||||||||| Sbjct 19 CAACTTAAACGGTTTCAA 2 >seq585752 Length=1498 Score = 370 bits (410), Expect = 1e-97 Identities = 481/661 (73%), Gaps = 3/661 (0%) Strand=Plus/Minus Query 177925 TACATGGGTCGTGAGTGGGAACTTTCTTACCGCCTAGGTATGCGTCCCTGGATCTGTGTA 177984 |||||||||| ||||||||||||| || || || |||||||| | ||||| ||| Sbjct 1471 TACATGGGTCATGAGTGGGAACTTAGTTTCCTTCTGGGTATGCGATCTTGGATTGTTGTT 1412 Query 177985 GCATACTCTGCTCCAGTCGCCGCAGCATCTGCTGTATTCCTTGTTTATCCTTTCGGTCAA 178044 ||||| || |||| | | || || | | ||| ||| | | || | |||||||| Sbjct 1411 GCATATTCAGCTCTTGCTACAGCTGCTACCGTTGTTTTCTTAATCTACCAGATCGGTCAA 1352 Query 178045 GGTTCTTTCTCTGACGCTATGCCCCTGGGTATCAGTGGCACCTTCAACTACATGCTTGTC 178104 || ||| ||||| | |||||| || || || ||| || ||||||| ||| |||| Sbjct 1351 GGAAGTTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTTATGATTGTA 1292 Query 178105 TTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCACATGTTGGGCGTCGCTGGTGTC 178164 ||||| || ||||||||||||| |||||||| || |||||||| || || |||||||| Sbjct 1291 TTCCAGGCTAAGCACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTA 1232 Query 178165 TTTGGTGGTTCTCTGTTCAGTGCGATGCACGGTTCTCTGGTTACTTCCTCGCTGGTTCGT 178224 || || || || | |||| ||| ||| | ||||| | || ||||| || || | Sbjct 1231 TTCGGCGGCTCCTTATTCAATGCTATGAATGGTTCCTTTGTAACTTCTAGTTTGATTAGG 1172 Query 178225 GAAACCACCGAGAACGAAAGTCAGAACT-ATGGTTACAAGTTCGGTCAAGAAGAAGAGAC 178283 |||||||| || || ||| || | | | |||||||| | |||||||| ||||| || Sbjct 1171 GAAACCACAGAAAATGAATC-CACTAGTGAAGGTTACAAATGTGGTCAAGAGGAAGAAAC 1113 Query 178284 CTACAACATCGTTGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATACGCATCCTT 178343 || || || || || ||||||||||| || ||||| |||||||||||||| | || Sbjct 1112 TTATAATATTGTAGCCGCTCATGGTTATTTTGGTCGACTGATCTTCCAATATACTAGTTT 1053 Query 178344 CAACAACTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGTT 178403 ||||||||| ||||| | ||||||||||| || | |||||||| | ||| ||| ||| Sbjct 1052 CAACAACTCTCGTTCATTACACTTCTTCCTAGCTTCTTGGCCTGTACTAGGTGTCTAGTT 993 Query 178404 CACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTC 178463 |||| || | ||| ||| || |||| |||||| | |||| |||||| |||||||| || Sbjct 992 CACTACTTTAGGTATTACAACTATGGTTTTCAACTTAAACGATTTCAATTTCAACCAATC 933 Query 178464 CATCATGGATAGTCAGGGCAAAGTCCTGAACACCTGGGCAGACGTTCTCAACCGTGCTGG 178523 || | ||||| || ||| | | || || | ||| || | |||| |||||| Sbjct 932 TATAGTTGATAGCCAAGGC-CGTTAATTAATACTTAGGCTGATATCATCAATCGTGCTAA 874 Query 178524 TCTTGGTATGGAAGTCATGCACGAGCGTAATGCTCACAACTTCCCTCTTGACCTCGCTGC 178583 |||||||||||||| ||||| || | ||||||| ||||||||||| || | ||||| Sbjct 873 CCTTGGTATGGAAGTTATGCATGAAACTCATGCTCATAACTTCCCTCTAGATTTAGCTGC 814 Query 178584 T 178584 | Sbjct 813 T 813 >seq492030 Length=881 Score = 354 bits (392), Expect = 1e-92 Identities = 373/486 (77%), Gaps = 6/486 (1%) Strand=Plus/Plus Query 178037 TCGGTCAAGGTTCTTTCTCTGACGCTATGCCCCTGGGTATCAGTGGCACCTTCAACTACA 178096 |||||||||| ||| ||||| | |||||| || || || ||| || ||||||| | Sbjct 399 TCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTTA 458 Query 178097 TGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCACATGTTGGGCGTCG 178156 || |||| ||| | || |||||||||||||| |||||||| || |||||||| ||||| | Sbjct 459 TGATTGTATTCTAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAG 518 Query 178157 CTGGTGTCTTTGGTGGTTCTCTGTTCAGTGCGATGCACGGTTCTCTGGTTACTTCCTCGC 178216 ||||||| || || || || || |||||||| ||||| | ||| |||| |||| || | Sbjct 519 CTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGATTCCTTGGTAACTT-CTAGT 577 Query 178217 TGGTTC-GTGAAACCACCGAGAACGAAAGTCAG--AACTATGGTTACAAGTTCGGTCAAG 178273 | | || | |||||||| || || ||| || | || | |||||||| || ||||||| Sbjct 578 TTGATCAGGGAAACCACAGAAAATGAA--TCCGCTAATGAAGGTTACAAATTTGGTCAAG 635 Query 178274 AAGAAGAGACCTACAACATCGTTGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAAT 178333 | ||||| || || || || || || ||||||||||| || || || ||||||||||||| Sbjct 636 AGGAAGAAACTTATAATATTGTAGCCGCTCATGGTTATTTTGGCCGACTGATCTTCCAAT 695 Query 178334 ACGCATCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCG 178393 | || ||||||||||| ||||| | ||||||||||| || || |||||||| || | Sbjct 696 ATGCTAGTTTCAACAACTCTCGTTCATTACACTTCTTCCTAGCTGCTTGGCCTGTAGTGG 755 Query 178394 GTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACT 178453 ||||||||||||||||| | ||| ||||||| ||||| |||||| | ||||||||||| | Sbjct 756 GTATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCCTTCAACTTAAACGGTTTCAATT 815 Query 178454 TCAACCAGTCCATCATGGATAGTCAGGGCAAAGTCCTGAACACCTGGGCAGACGTTCTCA 178513 ||||||| || | | |||||||| ||| || | || || ||||| || | ||| Sbjct 816 TCAACCAATCTGTAGTTGATAGTCAAGGCCGTGTAATTAATACTTGGGCTGATATCATCA 875 Query 178514 ACCGTG 178519 | |||| Sbjct 876 ATCGTG 881 >seq585461 Length=917 Score = 315 bits (348), Expect = 8e-81 Identities = 406/558 (73%), Gaps = 2/558 (0%) Strand=Plus/Minus Query 179295 TGGTTCTTTGCGCCGTCGTTTGGAGTTGCAGCGATTTTCCGCTTCCTACTCTTCCTACAG 179354 ||||||||||| || ||||| || ||||| || || || ||| | ||||| | || Sbjct 914 TGGTTCTTTGCACCTAGTTTTGGTGTAGCAGCTATATTTCGATTCATCCTCTTTTTTCAA 855 Query 179355 GGCTTCCACAACTGGACGCTCAACCCGTTCCACATGATGGGTGTAGCAGGTATCCTGGGC 179414 || || || || ||||| || ||||| || || |||||||| || || ||| | |||| Sbjct 854 GGATTTCATAATTGGACTCTGAACCCATTTCATATGATGGGAGTTGCTGGTGTATTGGGG 795 Query 179415 GGAGCATTGCTTTGTGCCATTCATGGTGCTACAGTAGAGAACACACTCTTTGAAGACAGT 179474 | || || || ||||| |||||||||||||| ||||| || || | |||||||| || Sbjct 794 GCTGCTTTACTATGTGCTATTCATGGTGCTACCGTAGAAAATACTTTATTTGAAGATGGT 735 Query 179475 GACCAATCAAATACATTCAAGGCATTCGAGCCTACACAAGAAGAGGAGACCTATTCGATG 179534 || ||||||||||| || || | || || |||| || || || ||||| ||| Sbjct 734 GATGGCGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCCATG 675 Query 179535 GTTACTGCCAACCGTTTCTGGTCTCAGATCTTTGGTATCGCCTTCAGCAATAAGCGTTGG 179594 || || || ||||| || ||||| || |||||||| | || || ||||| |||||| Sbjct 674 GTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATACACGTTGG 615 Query 179595 CTACATTTCTTTATGTTGTTTGTTCCTGTCATGGGTCTTTGGACCTCTAGCATTGGTATT 179654 |||||||||||||||| ||||| || || | ||| | |||| | || | | ||| Sbjct 614 TTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGT-GCTCTTGGATT 556 Query 179655 A-TTGGTCTTGCACTTAACCTTAGAGCTTATGACTTTGTTTCACAAGAGATCAGAGCGGC 179713 | | ||| | || || ||||| | || |||||||| ||||| ||||| || | || || Sbjct 555 AGTCGGTTTGGCCCTGAACCTACGTGCCTATGACTTCGTTTCTCAAGAAATTCGTGCCGC 496 Query 179714 AGAGGATCCTGAGTTCGAGACGTTCTATACCAAGAACATCCTATTGAATGAAGGTCTACG 179773 || ||||| || || ||||| ||||| || || || || ||||| || |||||| | || Sbjct 495 GGAAGATCCGGAATTTGAGACTTTCTACACAAAAAAAATTCTATTAAACGAAGGTATTCG 436 Query 179774 TGCTTGGATGGCACCAGTCGATCAACCACATGAAAACTTTGTATTTCCTGAAGAAGTATT 179833 |||||||||||| | ||||| || ||||||||| ||||||| ||||| || | | Sbjct 435 TGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGCTTCT 376 Query 179834 GCCAAGAGGCAACGCTCT 179851 ||| | || |||||||| Sbjct 375 ACCACGTGGAAACGCTCT 358 >seq567144 Length=1974 Score = 138 bits (152), Expect = 1e-27 Identities = 138/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 178406 CTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCA 178465 ||||| | ||| ||||||| ||||| |||||| | ||||||||||| |||||||| || Sbjct 177 CTGCTTTAGGTATTAGCACTATGGCTTTCAACTTAAACGGTTTCAATTTCAACCAATCTG 236 Query 178466 TCATGGATAGTCAGGGCAAAGTCCTGAACACCTGGGCAGACGTTCTCAACCGTGCTGGTC 178525 | | |||||||| ||| || | | || ||||| || | |||| |||||| | Sbjct 237 TAGTTGATAGTCAAGGCCGTGTAATTAGTACTTGGGCTGATATCATCAATCGTGCTAACC 296 Query 178526 TTGGTATGGAAGTCATGCACGAGCGTAATGCTCACAACTTCCCTCTTGACCTCGCTGCT 178584 ||||||||||||| ||||| || ||||||||||| ||||||||||| || | |||||| Sbjct 297 TTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGATTTAGCTGCT 355 >seq572160 Length=4591 Score = 131 bits (144), Expect = 2e-25 Identities = 157/209 (75%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 178132 CACCCCTTCCACATGTTGGGCGTCGCTGGTGTCTTTGGTGGTTCTCTGTTCAGTGCGATG 178191 ||||| || |||||||| ||||| |||||||| || || || || || ||||||| ||| Sbjct 4222 CACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGTTATG 4281 Query 178192 CACGGTTCTCTGGTTACTTCCTCGCTGGTTC-GTGAAACCACCGAGAACGAAAGTCAG-- 178248 || ||||| |||| ||||| | | | | || | ||||||| || || ||| || | Sbjct 4282 CATGGTTCCTTGGTAACTTC-TAGTTTGATCAGGGAAACCATAGAAAATGAA--TCCGCT 4338 Query 178249 AACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCTCATGGT 178308 || | |||||||| || |||||||| ||||| || || | || || || ||||||||| Sbjct 4339 AATGAAGGTTACAAATTTGGTCAAGAGGAAGAAACTTATAGTATTGTAGCCGCTCATGGT 4398 Query 178309 TACTTCGGTCGCCTGATCTTCCAATACGC 178337 || || || | |||||||||||||| || Sbjct 4399 TATTTTGGCCAACTGATCTTCCAATATGC 4427 >seq623142 Length=5574 Score = 127 bits (140), Expect = 2e-24 Identities = 141/188 (75%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 179664 GCACTTAACCTTAGAGCTTATGACTTTGTTTCACAAGAGATCAGAGCGGCAGAGGATCCT 179723 || || ||||| | || |||||||| ||||| ||||| || | | || || ||||| Sbjct 4700 GCCCTGAACCTACGTGCCTATGACTTCGTTTCTCAAGAAATTCGCACCGCGGAAGATCCA 4641 Query 179724 GAGTTCGAGACGTTCTATACCAAGAACATCCTATTGAATGAAGGTCTACGTGCTTGGATG 179783 || || ||||| ||||| || || || || ||||| || |||||| | |||||||||||| Sbjct 4640 GAATTTGAGACTTTCTACACAAAAAATATTCTATTAAACGAAGGTATTCGTGCTTGGATG 4581 Query 179784 GCACCAGTCGATCAACCACATGAAAACTTTGTATTTCCTGAAGAAGTATTGCCAAGAGGC 179843 || | ||||| || ||||||||| ||||||| ||||| || || | ||| | || Sbjct 4580 GCGGCTCAAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTTCTACCATGTGGA 4521 Query 179844 AACGCTCT 179851 |||||||| Sbjct 4520 AACGCTCT 4513 >seq631999 Length=611 Score = 118 bits (130), Expect = 1e-21 Identities = 130/173 (75%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 179658 GGTCTTGCACTTAACCTTAGAGCTTATGACTTTGTTTCACAAGAGATCAGAGCGGCAGAG 179717 ||| | || || ||||| | || |||||||| ||||| ||||| || | | || || Sbjct 8 GGTTTGGCCCTGAACCTACGTGCCTATGACTTCGTTTCTCAAGAAATTCGCACCGCGGAA 67 Query 179718 GATCCTGAGTTCGAGACGTTCTATACCAAGAACATCCTATTGAATGAAGGTCTACGTGCT 179777 ||||| || || ||||| ||||| || || || || ||||| || |||||| | |||||| Sbjct 68 GATCCGGAATTAGAGACTTTCTACACAAAAAATATTCTATTAAACGAAGGTATTCGTGCT 127 Query 179778 TGGATGGCACCAGTCGATCAACCACATGAAAACTTTGTATTTCCTGAAGAAGT 179830 |||||||| | ||||| || ||||||||| ||||||| ||||| |||| Sbjct 128 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGAAAGT 180 >seq789569 Length=1261 Score = 116 bits (128), Expect = 4e-21 Identities = 147/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 179582 CAATAAGCGTTGGCTACATTTCTTTATGTTGTTTGTTCCTGTCATGGGTCTTTGGACCTC 179641 |||||| |||||| |||||||||||||||| ||||| || || | ||| | |||| Sbjct 1255 CAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAG 1196 Query 179642 TAGCATTGGTATTATTGGTCTTGCACTTAACCTTAGAGCTTATGACTTTGTTTCACAAGA 179701 | |||| | | ||| | || || ||||| | || |||||||| |||| ||||| Sbjct 1195 TGCTCTTGGAGTAGTCGGTTTGGCCCTGAACCTACGTGCCTATGACTTCATTTCTCAAGA 1136 Query 179702 GATCAGAGCGGCAGAGGATCCTGAGTTCGAGACGTTCTATACCAAGAACATCCTATTGAA 179761 || | || || || ||||| | || ||||| ||||| || || || || ||||| || Sbjct 1135 AATTCGCGCCGCGGAAGATCCGAAATTTGAGACTTTCTACACAAAAAATATTCTATTAAA 1076 Query 179762 TGAAGGTCTACGTGCTTGGATG 179783 |||||| | |||||||||||| Sbjct 1075 CGAAGGTATTCGTGCTTGGATG 1054 >seq559756 Length=2000 Score = 105 bits (116), Expect = 8e-18 Identities = 115/150 (77%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 179124 CTATGGCCTTTTGTGGCGCTCCACGGTGCCTTCGCTCTCATAGGTTTCATGCTTCGGCAG 179183 || ||| ||||||| || || || || || |||| || |||||||||||| | || || Sbjct 1446 CTGTGGACTTTTGTTGCCCTGCATGGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAA 1505 Query 179184 TTTGAAATCGCACG-TCTAGTCGGTATTCGTCCTTACAATGCAATCGCGTTTTCTGGTCC 179242 ||||| | || || ||| || | | || ||||| || |||||||| ||||||||||| Sbjct 1506 TTTGAGCTTGCTCGATCTGTTCAAT-TGCGACCTTATAACGCAATCGCATTTTCTGGTCC 1564 Query 179243 AATTGCTGTCTTTGTGTCTGTTTTTCTCAT 179272 ||||||||| ||||| ||||| || || || Sbjct 1565 AATTGCTGTTTTTGTTTCTGTATTCCTGAT 1594 >seq375883 Length=1875 Score = 102 bits (112), Expect = 1e-16 Identities = 134/184 (73%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 179670 AACCTTAGAGCTTATGACTTTGTTTCACAAGAGATCAGAGCGGCAGAGGATCCTGAGTTC 179729 ||||| | || ||| |||||||||| ||||| || || | | ||| ||| || || Sbjct 910 AACCTGCGTGCCTATAACTTTGTTTCTCAAGAAATTAGTGTCGTAGAAGATTTGGAATTT 851 Query 179730 GAGACGTTCTATACCAAGAACATCCTATTGAATGAAGGTCTACGTGCTTGGATGGCAC-- 179787 ||||| |||||||| || || || ||||| |||||| | | | || |||||||| | Sbjct 850 GAGACTTTCTATACAAAAAATATACTATTAAATGAAAGAATTCATGGTTGGATGGGAGTT 791 Query 179788 CAGTCGATCAACCACATGAAAACTTTGTATTTCCTGAAGAAGTATTGCCAAGAGGCAACG 179847 || | |||| || ||| ||||| ||||||||||||| || || | | | | || |||| Sbjct 790 CAAT--ATCAGCCTCATCAAAACCTTGTATTTCCTGAGGAGGTTCTACTACGTGGAAACG 733 Query 179848 CTCT 179851 |||| Sbjct 732 CTCT 729 >seq553985 Length=2636 Score = 93.3 bits (102), Expect = 5e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 179517 GAGGAGACCTATTCGATGGTTACTGCCAACCGTTTCTGGTCTCAGATCTTTGGTATCGCC 179576 || || || ||||| ||||| || || ||||| || ||||| || |||||||| | || Sbjct 1208 GAAGAAACTTATTCCATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCT 1149 Query 179577 TTCAGCAATAAGCGTTGGCTACATTTCTTTATGTTGTTTGTTCCTGTCATGGGT 179630 || |||||| |||||| |||||||||||||||| ||||| || || || ||| Sbjct 1148 TTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAATTGGT 1095 >seq572830 Length=4883 Score = 91.5 bits (100), Expect = 2e-13 Identities = 113/152 (74%), Gaps = 2/152 (1%) Strand=Plus/Minus Query 178181 TCAGTGCGATGCACGGTTCTCTGGTTACTTCCTCGCTGGTTC-GTGAAACCACCGAGAAC 178239 ||||||| ||||| ||||| |||| |||| | | | | || | |||||||| || || Sbjct 791 TCAGTGCTATGCATGGTTCCTTGGTACCTTC-TAGTTTGATCAGGGAAACCACAGAAAAT 733 Query 178240 GAAAGTCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCT 178299 ||| || | |||||||| || |||||||| ||||| || || || || || || Sbjct 732 GAATCCACTAATGAAGGTTACAAATTTGGTCAAGAGGAAGAAACTTATAATATTGTAGCC 673 Query 178300 GCTCATGGTTACTTCGGTCGCCTGATCTTCCA 178331 ||||||||||| || || || ||||||||||| Sbjct 672 GCTCATGGTTATTTTGGCCGACTGATCTTCCA 641 >seq789568 Length=1806 Score = 87.8 bits (96), Expect = 2e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 179517 GAGGAGACCTATTCGATGGTTACTGCCAACCGTTTCTGGTCTCAGATCTTTGGTATCGCC 179576 || || || ||||| ||||| || || ||||| | ||||| || |||||||| | || Sbjct 167 GAAGAAACTTATTCCATGGTCACCGCTAACCGCATTTGGTCCCAAATCTTTGGGGTTGCT 108 Query 179577 TTCAGCAATAAGCGTTGGCTACATTTCTTTATGTTGTTTGTTCCTGTCATGGGTCTTTGG 179636 || |||||| |||||| |||||||||||||||| ||||| || || | ||| | ||| Sbjct 107 TTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGG 48 Query 179637 A 179637 | Sbjct 47 A 47 >seq553969 Length=1634 Score = 86.0 bits (94), Expect = 7e-12 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 176161 CTGACGATCAGTATATTCTGGATGCTGCTGAGGAAGCAGGAGTTGAACTCAACTACTCGT 176220 |||| ||| || || ||||| ||||||||| |||||||||||||| ||| || | Sbjct 468 CTGATGATGCTTACATCCTGGACTCTGCTGAGGCTGCAGGAGTTGAACTTCCCTATTCCT 409 Query 176221 GCCGCGCTGGTGCCTGTTCGAGTTGTGCAGGAAAACTCATCTCGGGCACGGTAGATCAAA 176280 || | ||||| || || || | || ||||| || || || || |||| || ||| Sbjct 408 GCAGGGCTGGGGCATGCTCCACCTGCGCAGGCAAGCTAGCATCAGGTTCGGTCGACCAAT 349 Query 176281 GCGATCAATCGTTCCTTGATGATGACCAGATCGATGCAGGTTTCATTCTGACTTGTGTTT 176340 ||| || ||||| ||||| | ||| || || | ||| | | ||||||| ||||| | Sbjct 348 CTGATGGTTCCTTCCTGGATGAAGCCCAAATGGAGGAAGGCTACCTTCTGACATGTGTCT 289 Query 176341 CATATCCTAC 176350 | || || || Sbjct 288 CCTACCCGAC 279 >seq9763 Length=353 Score = 82.4 bits (90), Expect = 9e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 177772 AACAACATCATTTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATTGGTCTCCACTTCTAT 177831 ||||| || || || ||||| || ||| | ||||| ||||| | | | || || || Sbjct 136 AACAATATTATCTCAGGTGCCATTATTCTTACTTCTGCAGCTATCGATTTGCATTTTTAC 77 Query 177832 CCCATCTGGGAAGCAGCTTCTCTCGATGAGTGGCTCTACAATGGTGGTCCTTTCCAACTC 177891 || |||||||||||||| || | ||||||||| | ||||| |||||||||| |||| Sbjct 76 CCAATCTGGGAAGCAGCATCCGTTGATGAGTGGTTATACAACGGTGGTCCTTATGAACTA 17 Query 177892 GTTATCTTCCACTTC 177906 || | | |||||| Sbjct 16 ATTGTTCTACACTTC 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590386704334080