Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21]
1,457 sequences; 137,073,209 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq2 129 6e-25
>seq2
Length=13294645
Score = 129 bits (142), Expect = 6e-25
Identities = 392/590 (66%), Gaps = 13/590 (2%)
Strand=Plus/Minus
Query 16196 ATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAA 16255
|| || |||||||| |||||||||| |||||||||| ||| | |||||||| ||
Sbjct 9186735 ATCAGGCACGCGAAATCGCAATGTAAGCCTTCGTCTCGTGAGATCAACTCGTTGGAGAAG 9186676
Query 16256 GTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAA 16315
||||| || ||||| ||||| || || | |||||| |||| |||| | | ||| |
Sbjct 9186675 GTTAATCCGGGCATGAGACCTCGCTTTTTCAGCCAGAAAATCG-AGCAGAAGCTACCGGA 9186617
Query 16316 -AAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTT 16374
||||| ||||| || ||| | || ||||||| | || || || | || | |
Sbjct 9186616 GAAGAAGATACCTTCGACACAGGCGAAAGCGACGATTCTCTCGGCAAAAGTCTGAGATCC 9186557
Query 16375 ATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTAT 16434
|| ||| |||| ||| |||| | |||||| | | ||| || ||||| ||
Sbjct 9186556 AT--CGA-TCCACTTCATCGCCCACTGGGCTTTCTTGGCGACGCAAGGGATGGTTTCGAT 9186500
Query 16435 GGCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACT 16494
|| || | | ||| | || | | || | || || || || | || | |||
Sbjct 9186499 CGCGCGGAAGAGATGGTCTCTCTCTTTGTTGTCCTTGATGTAAGTGTCGAGGAGGAGACT 9186440
Query 16495 GTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAG-AAGCATCGAGCCT 16553
|||||| || |||||||||||||| || || ||||| || || ||| ||||| || ||||
Sbjct 9186439 GTACATCTCGGAGTGTATGTTCTCAATCGCGATCTGGAAACCGTAGAAAGCA-CGCGCCT 9186381
Query 16554 CCGCTATTTGTACTTC-CACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCA 16612
||| | ||| || || || | |||||| || || ||||| ||||| |||||
Sbjct 9186380 CCGAGACTTGCACATCGGACAT-AAATCGGGAAGCGAGATTCTCCAGAACGATTCCGTCT 9186322
Query 16613 CTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGAATA 16672
|| || || || || | || ||| || ||||| | | |||| | | ||| |
Sbjct 9186321 GAGGCGGCGAAGAAGGCGAGTACGTGTTTGATGAAGTGTCGTTCGCCGTCGTTTAGATTC 9186262
Query 16673 TGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCA-AAAGCTAGCCAC 16731
| ||| || |||| || | ||| |||||||| | |||||| |||| | || |
Sbjct 9186261 TCCCAGTCGCGACCGTCTTGCGAAAGATCGACTTCTTCGGCCGTCCAGAAAGAT-GCTTC 9186203
Query 16732 TGCCTTTTTATACATTTTCCAAATATCATTGTATTGTAT-GGGAA-ATAC 16779
||||| || ||||| | ||| || | |||||| || ||||| ||||
Sbjct 9186202 GGCCTTCTTGTACATCTCCCAGATCTGTGGGTATTGGATCGGGAACATAC 9186153
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511405085865240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |