Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21] 1,457 sequences; 137,073,209 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq2 129 6e-25 >seq2 Length=13294645 Score = 129 bits (142), Expect = 6e-25 Identities = 392/590 (66%), Gaps = 13/590 (2%) Strand=Plus/Minus Query 16196 ATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAA 16255 || || |||||||| |||||||||| |||||||||| ||| | |||||||| || Sbjct 9186735 ATCAGGCACGCGAAATCGCAATGTAAGCCTTCGTCTCGTGAGATCAACTCGTTGGAGAAG 9186676 Query 16256 GTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAA 16315 ||||| || ||||| ||||| || || | |||||| |||| |||| | | ||| | Sbjct 9186675 GTTAATCCGGGCATGAGACCTCGCTTTTTCAGCCAGAAAATCG-AGCAGAAGCTACCGGA 9186617 Query 16316 -AAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTT 16374 ||||| ||||| || ||| | || ||||||| | || || || | || | | Sbjct 9186616 GAAGAAGATACCTTCGACACAGGCGAAAGCGACGATTCTCTCGGCAAAAGTCTGAGATCC 9186557 Query 16375 ATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTAT 16434 || ||| |||| ||| |||| | |||||| | | ||| || ||||| || Sbjct 9186556 AT--CGA-TCCACTTCATCGCCCACTGGGCTTTCTTGGCGACGCAAGGGATGGTTTCGAT 9186500 Query 16435 GGCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACT 16494 || || | | ||| | || | | || | || || || || | || | ||| Sbjct 9186499 CGCGCGGAAGAGATGGTCTCTCTCTTTGTTGTCCTTGATGTAAGTGTCGAGGAGGAGACT 9186440 Query 16495 GTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAG-AAGCATCGAGCCT 16553 |||||| || |||||||||||||| || || ||||| || || ||| ||||| || |||| Sbjct 9186439 GTACATCTCGGAGTGTATGTTCTCAATCGCGATCTGGAAACCGTAGAAAGCA-CGCGCCT 9186381 Query 16554 CCGCTATTTGTACTTC-CACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCA 16612 ||| | ||| || || || | |||||| || || ||||| ||||| ||||| Sbjct 9186380 CCGAGACTTGCACATCGGACAT-AAATCGGGAAGCGAGATTCTCCAGAACGATTCCGTCT 9186322 Query 16613 CTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGAATA 16672 || || || || || | || ||| || ||||| | | |||| | | ||| | Sbjct 9186321 GAGGCGGCGAAGAAGGCGAGTACGTGTTTGATGAAGTGTCGTTCGCCGTCGTTTAGATTC 9186262 Query 16673 TGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCA-AAAGCTAGCCAC 16731 | ||| || |||| || | ||| |||||||| | |||||| |||| | || | Sbjct 9186261 TCCCAGTCGCGACCGTCTTGCGAAAGATCGACTTCTTCGGCCGTCCAGAAAGAT-GCTTC 9186203 Query 16732 TGCCTTTTTATACATTTTCCAAATATCATTGTATTGTAT-GGGAA-ATAC 16779 ||||| || ||||| | ||| || | |||||| || ||||| |||| Sbjct 9186202 GGCCTTCTTGTACATCTCCCAGATCTGTGGGTATTGGATCGGGAACATAC 9186153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511405085865240