Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21] 1,457 sequences; 137,073,209 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq3 107 1e-18 seq7 84.2 2e-11 >seq3 Length=15215380 Score = 107 bits (118), Expect = 1e-18 Identities = 124/167 (74%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 101707 GTGAGCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAAT 101766 ||||||||| || ||| |||||| | || ||||| || ||||| || ||||| | Sbjct 11080556 GTGAGCATCCCCAATACCATGGATGATTTCACCAGGAACAAGATTGCACACGTGAGCGAG 11080497 Query 101767 CATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGC 101826 || |||||| | |||||| ||| |||||||||||| ||||| || | |||||||| || Sbjct 11080496 CAGGCAAGTAAGAAGAGAGTAGGAAGCAATGTTAAAAGGCACACCAAGGCCCATATCTGC 11080437 Query 101827 TGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAA 101873 ||| | ||||||| ||| || || |||| || || ||||||| Sbjct 11080436 TGAACCCTGATACATTTGGCATGAGAGCTCCCCTTCTGCTACATAAA 11080390 >seq7 Length=17055980 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/201 (69%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 101755 GACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAA 101814 ||| ||||| | ||||| || | ||| || || ||||||||||| || || || | Sbjct 15010492 GACGTGAGCGAGGATGCATGTAAGAAGGGAGTATGAGGCAATGTTAAACGGTACACCAAG 15010551 Query 101815 CCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAA 101874 |||||||||||||| | ||||||| |||||| ||||||| ||||| |||||||| Sbjct 15010552 ACCCATATCAGCTGACCGCTGATACATTTGACATGAAAGCTCTCCATTTGCAACATAAAA 15010611 Query 101875 TTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGC 101934 || || | || || || || | |||| || ||| ||| ||||||||| Sbjct 15010612 CTGCGCAAACATGTGGCATGGAGGAAGTGCCATCAGCTTAAGGTCAGAAGGATTCCAAGC 15010671 Query 101935 ACACATTAACATCCTTCTATC 101955 |||| | |||| || ||| Sbjct 15010672 CGACATAATTATCCGTCGATC 15010692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361244785194707