Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21]
1,457 sequences; 137,073,209 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq3 107 1e-18
seq7 84.2 2e-11
>seq3
Length=15215380
Score = 107 bits (118), Expect = 1e-18
Identities = 124/167 (74%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 101707 GTGAGCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAAT 101766
||||||||| || ||| |||||| | || ||||| || ||||| || ||||| |
Sbjct 11080556 GTGAGCATCCCCAATACCATGGATGATTTCACCAGGAACAAGATTGCACACGTGAGCGAG 11080497
Query 101767 CATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGC 101826
|| |||||| | |||||| ||| |||||||||||| ||||| || | |||||||| ||
Sbjct 11080496 CAGGCAAGTAAGAAGAGAGTAGGAAGCAATGTTAAAAGGCACACCAAGGCCCATATCTGC 11080437
Query 101827 TGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAA 101873
||| | ||||||| ||| || || |||| || || |||||||
Sbjct 11080436 TGAACCCTGATACATTTGGCATGAGAGCTCCCCTTCTGCTACATAAA 11080390
>seq7
Length=17055980
Score = 84.2 bits (92), Expect = 2e-11
Identities = 139/201 (69%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 101755 GACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAA 101814
||| ||||| | ||||| || | ||| || || ||||||||||| || || || |
Sbjct 15010492 GACGTGAGCGAGGATGCATGTAAGAAGGGAGTATGAGGCAATGTTAAACGGTACACCAAG 15010551
Query 101815 CCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAA 101874
|||||||||||||| | ||||||| |||||| ||||||| ||||| ||||||||
Sbjct 15010552 ACCCATATCAGCTGACCGCTGATACATTTGACATGAAAGCTCTCCATTTGCAACATAAAA 15010611
Query 101875 TTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGC 101934
|| || | || || || || | |||| || ||| ||| |||||||||
Sbjct 15010612 CTGCGCAAACATGTGGCATGGAGGAAGTGCCATCAGCTTAAGGTCAGAAGGATTCCAAGC 15010671
Query 101935 ACACATTAACATCCTTCTATC 101955
|||| | |||| || |||
Sbjct 15010672 CGACATAATTATCCGTCGATC 15010692
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361244785194707
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |