Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21]
1,457 sequences; 137,073,209 total letters
Query= NC_001623.1
Length=133894
Score E
Sequences producing significant alignments: (Bits) Value
seq4 93.3 4e-14
seq762 82.4 7e-11
seq6 82.4 7e-11
>seq4
Length=14320061
Score = 93.3 bits (102), Expect = 4e-14
Identities = 90/116 (78%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 29058 AAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGAT 29117
||||||||| | || |||||||||||| || || ||||| || || ||||| ||||||
Sbjct 10684937 AAAGAAGGTATACCACCAGATCAACAAAGGCTGATATTTGCTGGTAAGCAACTTGAAGAT 10684878
Query 29118 TCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTT 29173
| ||| | || |||||||| || ||||| || |||||||||||| |||| ||
Sbjct 10684877 GGCCGAACCCTAGCGGATTACAACATCCAGAAAGAGTCTACTCTTCACCTGGTCTT 10684822
>seq762
Length=4953
Score = 82.4 bits (90), Expect = 7e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021
||||| || ||| |||| || | || ||||| ||||| ||| ||| |||| | |
Sbjct 369 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTGGAAAGCTCT 310
Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081
|| || | | | | |||| || || ||||| |||||| | || |||||
Sbjct 309 GACACCATCGACAACGTTAAAGCCAAGATCCAGGATAAGGAAGGTATTCCTCCGGATCAG 250
Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141
|| ||||||||||| || || || || |||| || | |||| |||||||||||||
Sbjct 249 CAGAGACTTATCTTCGCCGGAAAGCAGTTGGAGGACGGCCGAACTTTGGCCGATTACAAC 190
Query 29142 ATTCAGAAGGAATCTACTCTTCA 29164
|| |||||||| || || |||||
Sbjct 189 ATCCAGAAGGAGTCGACCCTTCA 167
>seq6
Length=18523719
Score = 82.4 bits (90), Expect = 7e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021
||||| || ||| |||| || | || ||||| ||||| ||| ||| |||| | |
Sbjct 1438505 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTGGAAAGCTCT 1438446
Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081
|| || | | | | |||| || || ||||| |||||| | || |||||
Sbjct 1438445 GACACCATCGACAACGTTAAAGCCAAGATCCAGGATAAGGAAGGTATTCCTCCGGATCAG 1438386
Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141
|| ||||||||||| || || || || |||| || | |||| |||||||||||||
Sbjct 1438385 CAGAGACTTATCTTCGCCGGAAAGCAGTTGGAGGACGGCCGAACTTTGGCCGATTACAAC 1438326
Query 29142 ATTCAGAAGGAATCTACTCTTCA 29164
|| |||||||| || || |||||
Sbjct 1438325 ATCCAGAAGGAGTCGACCCTTCA 1438303
Score = 82.4 bits (90), Expect = 7e-11
Identities = 89/116 (77%), Gaps = 4/116 (3%)
Strand=Plus/Plus
Query 29075 AGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGAT--TCCAAAACTATGGCC 29132
||| ||||| ||||| ||||| || || ||||| ||||| ||| || | ||| ||
Sbjct 17514331 AGACCAACAGAGACTCATCTTCGCTGGGAAACAGCTGGAGGATGGTCGCACACTT--GCG 17514388
Query 29133 GATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
||||||||||| ||||||||||| || |||||| | ||||| || |||| || ||
Sbjct 17514389 GATTACAATATCCAGAAGGAATCAACCCTTCACCTTGTGTTGCGTCTACGTGGTGG 17514444
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 428328393957335
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |