Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21] 1,457 sequences; 137,073,209 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq3 91.5 1e-13 >seq3 Length=15215380 Score = 91.5 bits (100), Expect = 1e-13 Identities = 145/207 (70%), Gaps = 6/207 (3%) Strand=Plus/Minus Query 18122 GTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTG 18181 ||||||||||||||| ||||| |||||||| || || | || || ||| || | || Sbjct 11243688 GTGAAGTGTTGATTCCTTTTGGATGTTGTAATCTGCAAGGGTGCGACCATCCTCGAGCTG 11243629 Query 18182 TTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACG---CCTTCCTTATCGGCAAT 18238 ||| || || |||| | ||| | ||| ||| ||| || |||||||| || ||| Sbjct 11243628 TTTACCAGCGAAGATGAATCTCTATTGGTCC---GGCGCGATCCCTTCCTTGTCTTGAAT 11243572 Query 18239 TTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCC 18298 | | ||| || | |||||||||| ||| ||| | ||| ||| ||||||| Sbjct 11243571 CTTTGTCTTTACATTATCAACAGTGTCTGAACTCTCAACTTCGAGGGTAATGGTTTTGCC 11243512 Query 18299 GGTCAATGTTTTTACAAAAATTTGCAT 18325 || | |||||| ||||| |||||||| Sbjct 11243511 AGTGAGTGTTTTCACAAATATTTGCAT 11243485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379337263917465