Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21]
1,457 sequences; 137,073,209 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq3 91.5 1e-13
>seq3
Length=15215380
Score = 91.5 bits (100), Expect = 1e-13
Identities = 145/207 (70%), Gaps = 6/207 (3%)
Strand=Plus/Minus
Query 18122 GTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTG 18181
||||||||||||||| ||||| |||||||| || || | || || ||| || | ||
Sbjct 11243688 GTGAAGTGTTGATTCCTTTTGGATGTTGTAATCTGCAAGGGTGCGACCATCCTCGAGCTG 11243629
Query 18182 TTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACG---CCTTCCTTATCGGCAAT 18238
||| || || |||| | ||| | ||| ||| ||| || |||||||| || |||
Sbjct 11243628 TTTACCAGCGAAGATGAATCTCTATTGGTCC---GGCGCGATCCCTTCCTTGTCTTGAAT 11243572
Query 18239 TTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCC 18298
| | ||| || | |||||||||| ||| ||| | ||| ||| |||||||
Sbjct 11243571 CTTTGTCTTTACATTATCAACAGTGTCTGAACTCTCAACTTCGAGGGTAATGGTTTTGCC 11243512
Query 18299 GGTCAATGTTTTTACAAAAATTTGCAT 18325
|| | |||||| ||||| ||||||||
Sbjct 11243511 AGTGAGTGTTTTCACAAATATTTGCAT 11243485
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379337263917465
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |