Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21]
1,457 sequences; 137,073,209 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq4 93.3 4e-14
seq2 91.5 1e-13
>seq4
Length=14320061
Score = 93.3 bits (102), Expect = 4e-14
Identities = 161/234 (69%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 38400 TTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTC 38459
||||||| ||||||||| || || || | |||||||||||||| |||||||| | |
Sbjct 320839 TTGAGGCCTTGGAGTTCCTGCATTGAAGAGAGTAGGAGATGCATGAGTGAACCATCTCTG 320780
Query 38460 CGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGA 38519
||||| ||| ||||| | || ||| | | |||||| ||| || || | ||
Sbjct 320779 CGACATCAAATGGTATGTCTTGATCACAGAAGCAATATCATTCTTGTGGATGCCAACAGC 320720
Query 38520 TACCCTCATTAGCATATGTTGTGGTCTTTCTATTATTTTATTATTCTGTTTAAGTAGATA 38579
|||||||| ||||| ||||| || ||||| | | ||| | ||| | || ||
Sbjct 320719 AACCCTCATCAGCATGTGTTGAGGCCTTTCGACAACTTTCCCGTGGACTTTCAAGAGGTA 320660
Query 38580 CGATTTTTCTAATGTTTTTATTCCAAAATAACTATATGAATAATCTCTATCGTA 38633
||| | || | |||||| | |||||| ||| |||| | |||| | |||||
Sbjct 320659 AGATCTCTCAAGTGTTTTAAATCCAAAGTAATCATATTCAAAATCACGGTCGTA 320606
>seq2
Length=13294645
Score = 91.5 bits (100), Expect = 1e-13
Identities = 375/586 (64%), Gaps = 4/586 (1%)
Strand=Plus/Minus
Query 11630 CACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAAT 11689
||||| ||||| |||||||| |||||||||| || | || || || || ||||||
Sbjct 9186729 CACGCGAAATCGCAATGTAAGCCTTCGTCTCGTGAGATCAACTCGTTGGAGAAGGTTAAT 9186670
Query 11690 CCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCA-AATGAACCAGAAAAGAA 11748
|||||||| | ||||| ||||| | ||| || || | |||| || ||| || |||||
Sbjct 9186669 CCGGGCATGAGACCTCGCTTTTTCAGCCAGAAAATCG-AGCAGAAGCTACCGGAGAAGAA 9186611
Query 11749 TATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATATACCTTGTTGCTAGATAT 11808
|| || || ||| || || || || | ||| || || | || | | ||
Sbjct 9186610 GATACCTTCGACACAGGCGAAAGCGACGATTCTCTCGGCAAAAGTCTGAGATCCATCGAT 9186551
Query 11809 CCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCTATAGCGTTAAA 11868
||| || | ||||| | |||||||| ||||| || ||||| || ||| ||
Sbjct 9186550 CCACTTCATCGCCCACTGGGCTTTCTTGGCGACGCAAGGGATGGTTTCGATCGCGCGGAA 9186491
Query 11869 TAAATGCATTTTTTCTATATTATCTCTTACATATGTATCTATTAATAAACTATACATTTC 11928
| ||| | | ||| | || || | | || || || | | | ||| ||||| ||
Sbjct 9186490 GAGATGGTCTCTCTCTTTGTTGTCCTTGATGTAAGTGTCGAGGAGGAGACTGTACATCTC 9186431
Query 11929 TGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCTGAACACTG 11988
|| || || || || || || || || || || |||||| || ||||| || ||
Sbjct 9186430 GGAGTGTATGTTCTCAATCGCGATCTGGAAACCGTAGAAAGCACGCGCCTCCGAGACTTG 9186371
Query 11989 TACATC-CACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTAGATGCAA 12047
||||| |||| ||||| || | |||||| || || || || | || |
Sbjct 9186370 CACATCGGACAT-AAATCGGGAAGCGAGATTCTCCAGAACGATTCCGTCTGAGGCGGCGA 9186312
Query 12048 AAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTTTAGTTAATTTATCCCAATCAT 12107
| || || |||| ||||| || |||| | |||| | | ||| || ||||| ||
Sbjct 9186311 AGAAGGCGAGTACGTGTTTGATGAAGTGTCGTTCGCCGTCGTTTAGATTCTCCCAGTCGC 9186252
Query 12108 CTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAACTTGCCACTGATTGTTTAT 12167
|||| || | ||| |||||||| | ||||| ||| ||| | | | || |
Sbjct 9186251 GACCGTCTTGCGAAAGATCGACTTCTTCGGCCGTCCAGAAAGATGCTTCGGCCTTCTTGT 9186192
Query 12168 ACATTTTCCAGATATCATGATACTTAATAGGGAAAATAACGAACCT 12213
|||| | |||||| | | || | || ||||| ||| ||| ||
Sbjct 9186191 ACATCTCCCAGATCTGTGGGTATTGGATCGGGAACATACAGAATCT 9186146
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468516266992080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |