Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21]
1,457 sequences; 137,073,209 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq2 196 6e-45
seq7 98.7 1e-15
>seq2
Length=13294645
Score = 196 bits (216), Expect = 6e-45
Identities = 411/605 (68%), Gaps = 6/605 (1%)
Strand=Plus/Minus
Query 42059 ATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAAC 42118
|||| || ||||||||||| || | || || |||| || || |||||||| ||
Sbjct 9186735 ATCAGGCACGCGAAATCGCAATGTAAGCCTTCGTCTCGTGAGATCAACTCGTTGGAGAAG 9186676
Query 42119 GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGAT-CCAGA 42177
|| | ||||||||| || || |||||||| ||||| || || || ||| | | | || ||
Sbjct 9186675 GTTAATCCGGGCATGAGACCTCGCTTTTTCAGCCAGAAAATCGA-GCAGAAGCTACCGGA 9186617
Query 42178 AAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTC 42237
|||||||| ||||| || || || || | | |||||| || || | |
Sbjct 9186616 GAAGAAGATACCTTCGACACAGGCGAAAGCGACGATTCTCTCGGCAAAAGTCTGAGATCC 9186557
Query 42238 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 42297
|| |||||||| ||||| | ||| ||||| || ||||| || ||||| || ||
Sbjct 9186556 ATCGATCCACTTCATCGCCCACTGGGCTTTCTTGGCGACGCAAGGGATGGTTTCGATCGC 9186497
Query 42298 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATA 42357
||||||| || | | || || | || || | || || |||| | ||||| ||
Sbjct 9186496 GCGGAAGAGATGGTCTCTCTCTTTGTTGTCCTTGATGTAAGTGTCGAGGAGGAGACTGTA 9186437
Query 42358 CATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGT 42417
||| || || || ||||| ||||| || ||||| || ||||||||| | ||||| |
Sbjct 9186436 CATCTCGGAGTGTATGTTCTCAATCGCGATCTGGAAACCGTAGAAAGCACGCGCCTCCGA 9186377
Query 42418 AACCTGTACTTCTGTACA-AAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGG 42476
|| || || || | ||| |||||| ||| | ||| || || |||||||| ||
Sbjct 9186376 GACTTGCACATC-GGACATAAATCGGGAAGCGAGATTCTCCAGAACGATTCCGTCTGAGG 9186318
Query 42477 CTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTG-TTAATTTATTC 42535
| || || || || | ||| ||||| || || | | |||| ||| | ||| || | |
Sbjct 9186317 CGGCGAAGAAGGCGAGTACGTGTTTGATGAAGTGTCGTTCG-CCGTCGTTTAGATTCTCC 9186259
Query 42536 CAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCC 42595
|| || |||| || | ||| |||||||| ||||||| || |||||||| |||
Sbjct 9186258 CAGTCGCGACCGTCTTGCGAAAGATCGACTTCTTCGGCCGTCCAGAAAGATGCTTCGGCC 9186199
Query 42596 TTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAATCTATTTGGA 42655
|| || ||||| | |||||| | | ||||| || ||||| ||| ||||| | |||
Sbjct 9186198 TTCTTGTACATCTCCCAGATCTGTGGGTATTGGATCGGGAACATACAGAATCTGTCTGGG 9186139
Query 42656 TTTGG 42660
||||
Sbjct 9186138 GTTGG 9186134
>seq7
Length=17055980
Score = 98.7 bits (108), Expect = 1e-15
Identities = 155/222 (70%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 72177 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 72236
|||||| ||||| | || | ||| || | ||| | || | | |||||||| ||||||
Sbjct 15540846 TCCTCCTTGATCAACATAGCGAGCAGTATCATTGAATACCCGTAGCATTGGAACAATACC 15540787
Query 72237 ATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGA 72296
||| ||||| ||||| || || || || |||||| | || || || ||| || |||
Sbjct 15540786 ATTAGATGCTCCATTTGTGCCACGAATGTAACTTCCAGTTGCGCGGATGTTGTGAACTGA 15540727
Query 72297 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 72356
| |||||||||||| || ||| || | || || ||| | ||| ||||| ||
Sbjct 15540726 AACACCTATTCCCCCAGCTGACTTACTTATAACAGCACACTCTTTCAGCGTGTCATATAT 15540667
Query 72357 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCT 72398
|| || || ||||||||| ||||| | ||||| |||||
Sbjct 15540666 TCCTTCAATGCTATCATCCTTCATGCAGATGAGAAAGCAGCT 15540625
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671126976877320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |