Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21]
1,457 sequences; 137,073,209 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq2 140 5e-28
>seq2
Length=13294645
Score = 140 bits (154), Expect = 5e-28
Identities = 375/559 (67%), Gaps = 16/559 (3%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||||| |||||||| ||||| | || || || ||||||| |||||| ||||||||
Sbjct 9186179 ATCTGGGAGATGTACAAGAAGGCCGAAGCATCTTTCTGGACGGCCGAAGAAGTCGATCTT 9186238
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
|| | ||| ||| ||||||| || | | || || ||| | || ||
Sbjct 9186239 TCGCAAGACGGTCGCGACTGGGAGAATC---TAAACGACGGCGAACGACACTTCATCAAA 9186295
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198
||| | | |||||||| |||| ||| || |||||||| || ||||| | |||
Sbjct 9186296 CACGTACTCGCCTTCTTCGCCGCCTCAGACGGAATCGTTCTGGAGAATCTCGCTTCCCGA 9186355
Query 125199 TTC-TCTCAAGAGTTGACCATTC-CAGAGGTGTCGTGCTTT-TACGGATTCCAAATCATG 125255
|| | || || || | | || | |||| | |||||||| ||||| ||||| ||| |
Sbjct 9186356 TTTATGTCC-GATGTG-CAAGTCTCGGAGGCG-CGTGCTTTCTACGGTTTCCAGATCGCG 9186412
Query 125256 ATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCG 125315
||||||||| | ||||| || |||||| | || | |||| ||||| || |
Sbjct 9186413 ATTGAGAACATACACTCCGAGATGTACAGTCTCCTCCTCGACACTTACATCAAGGA-CAA 9186471
Query 125316 CAACGTAA-ACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGC 125374
||| | | | || ||||| ||| ||||| || | || | | || || ||
Sbjct 9186472 CAAAGAGAGAGACCATCTCTTCCGCGCGATCGAAACCATCCCTTGCGTCGCCAAGAAAGC 9186531
Query 125375 TCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGC 125434
|| |||| ||| ||||||||||| || ||| ||||| ||| | || ||
Sbjct 9186532 CCAGTGGGCGATGAAGTGGATCGATGGATCTCAGACTTTT---GCCGAGAGAATCGTCGC 9186588
Query 125435 ATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTT-TGCGGCCATCTTTTGGCTCA 125493
|||||| || || || |||||||| || ||||| || ||| | || || ||||| |
Sbjct 9186589 TTTCGCCTGTGTCGAAGGTATCTTCTTCTCCGGTAGCTTCTGCT-CGATTTTCTGGCTGA 9186647
Query 125494 AGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGG 125553
| ||||| || |||||||||||| | || | |||||||| || || |||||||| |
Sbjct 9186648 AAAAGCGAGGTCTCATGCCCGGATTAACCTTCTCCAACGAGTTGATCTCACGAGACGAAG 9186707
Query 125554 GCCTACACTGTGACTTTGC 125572
|| |||| || || || ||
Sbjct 9186708 GCTTACATTGCGATTTCGC 9186726
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741045703459320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |