Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21] 1,457 sequences; 137,073,209 total letters Query= NC_006820.1 Length=196280 Score E Sequences producing significant alignments: (Bits) Value seq5 118 1e-21 >seq5 Length=16150104 Score = 118 bits (130), Expect = 1e-21 Identities = 216/314 (69%), Gaps = 3/314 (1%) Strand=Plus/Plus Query 138402 AACCCCTTTCATATGATGGGCGTAGCAGGTATTCTTGGTGGTGCTCTGCTCTGTGCTATT 138461 ||||| ||| |||||||| | || || ||||| || || | |||| | || || ||||| Sbjct 10049296 AACCCATTTTATATGATGAGAGTCGCCGGTATACTGGGCGCTGCTTTTCTATGCACTATT 10049355 Query 138462 CATGGTGCTACAGTAGAAAATACTTTGTATGAAGATGGCGAACAATCAAATACTTTTAAA 138521 |||||||||| ||| || || ||| ||| || |||| | ||||||| || | Sbjct 10049356 CATGGTGCTATTGTAAAATATCTTTTATATAAAAATGGTAATGGTGCAAATACATTAGAT 10049415 Query 138522 GCATTTGAACCTACTCAAGAAGAAGAAACCTATTCAATGGTTACTGCTAACCGTTACTGG 138581 || ||| | | | ||||| |||||||| ||||||||| | || || ||| | | | Sbjct 10049416 GCTTTTAATACAAATCAAGTCGAAGAAACTTATTCAATGTTCACCGCAAACTGCTTTTTA 10049475 Query 138582 TCGCAAATCTTTGGAATTGCTTTTAGTAATAAGCGTTGGCTTCACTTCTTTATGCTCTTT 138641 || ||||| ||||| |||| ||| |||| || | | | || |||||| | ||| Sbjct 10049476 TCACAAATATTTGGGGTTGCGTTTTCCAATAGAAGTCAG--TTATTTATTTATGTTATTT 10049533 Query 138642 GTTCCCGTCATGGGTCTCTGGACTAGTAGTATTGGTATTATTGGTCTTGCTCTTAACCTA 138701 || | || || | | | || | ||| | |||| | || | ||| ||| |||||||| Sbjct 10049534 GTACTTGTAATTGATATGTGTATGAGTGCTCTTGG-AGTAGTCTTCTAGCTTTTAACCTA 10049592 Query 138702 CGAGCGTATGATTT 138715 || || |||| ||| Sbjct 10049593 CGTGCCTATGGTTT 10049606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627956563132800