Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21]
1,457 sequences; 137,073,209 total letters
Query= NC_006820.1
Length=196280
Score E
Sequences producing significant alignments: (Bits) Value
seq5 118 1e-21
>seq5
Length=16150104
Score = 118 bits (130), Expect = 1e-21
Identities = 216/314 (69%), Gaps = 3/314 (1%)
Strand=Plus/Plus
Query 138402 AACCCCTTTCATATGATGGGCGTAGCAGGTATTCTTGGTGGTGCTCTGCTCTGTGCTATT 138461
||||| ||| |||||||| | || || ||||| || || | |||| | || || |||||
Sbjct 10049296 AACCCATTTTATATGATGAGAGTCGCCGGTATACTGGGCGCTGCTTTTCTATGCACTATT 10049355
Query 138462 CATGGTGCTACAGTAGAAAATACTTTGTATGAAGATGGCGAACAATCAAATACTTTTAAA 138521
|||||||||| ||| || || ||| ||| || |||| | ||||||| || |
Sbjct 10049356 CATGGTGCTATTGTAAAATATCTTTTATATAAAAATGGTAATGGTGCAAATACATTAGAT 10049415
Query 138522 GCATTTGAACCTACTCAAGAAGAAGAAACCTATTCAATGGTTACTGCTAACCGTTACTGG 138581
|| ||| | | | ||||| |||||||| ||||||||| | || || ||| | | |
Sbjct 10049416 GCTTTTAATACAAATCAAGTCGAAGAAACTTATTCAATGTTCACCGCAAACTGCTTTTTA 10049475
Query 138582 TCGCAAATCTTTGGAATTGCTTTTAGTAATAAGCGTTGGCTTCACTTCTTTATGCTCTTT 138641
|| ||||| ||||| |||| ||| |||| || | | | || |||||| | |||
Sbjct 10049476 TCACAAATATTTGGGGTTGCGTTTTCCAATAGAAGTCAG--TTATTTATTTATGTTATTT 10049533
Query 138642 GTTCCCGTCATGGGTCTCTGGACTAGTAGTATTGGTATTATTGGTCTTGCTCTTAACCTA 138701
|| | || || | | | || | ||| | |||| | || | ||| ||| ||||||||
Sbjct 10049534 GTACTTGTAATTGATATGTGTATGAGTGCTCTTGG-AGTAGTCTTCTAGCTTTTAACCTA 10049592
Query 138702 CGAGCGTATGATTT 138715
|| || |||| |||
Sbjct 10049593 CGTGCCTATGGTTT 10049606
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627956563132800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |