Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21]
1,457 sequences; 137,073,209 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq6 98.7 1e-15
seq4 98.7 1e-15
seq5 82.4 7e-11
>seq6
Length=18523719
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | ||||| ||||| ||||| || || | ||||| |||| | ||
Sbjct 17513762 ATGCAAATCTTTGTGAAAACTTTAACAGGCAAGACCATCACTCTCGAGGTCGAGAGCTCT 17513821
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||||||||| | |||||| |||||| || ||||| || || ||||| || ||
Sbjct 17513822 GACACCATCGACAATGTCAAAGCAAAGATCCAAGATAAAGAGGGAATTCCTCCGGACCAG 17513881
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| || || || | || ||| || || || ||||||| | | | || ||||| |||
Sbjct 17513882 CAGAGGCTTATCTTCGCCGGTAAGCAGCTAGAAGATGGTCGCACACTCGCTGACTACAAC 17513941
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
|| || ||||| || || ||||| |||| || | |||||||| ||
Sbjct 17513942 ATCCAGAAAGAGTCCACCCTCCATTTGGTGCTTCGTCTTAGAGGCGG 17513988
>seq4
Length=14320061
Score = 98.7 bits (108), Expect = 1e-15
Identities = 105/136 (77%), Gaps = 2/136 (1%)
Strand=Plus/Minus
Query 26863 ACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAG 26922
|||||||||| ||||| || ||||||||||| || || | | || || ||||| ||||
Sbjct 10684939 ACAAAGAAGGTATACCACCAGATCAACAAAGGCTGATATTTGCTGGTAAGCAACTTGAAG 10684880
Query 26923 ATGATAGAAACGTCAGC-GACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981
||| ||| | | ||| || || ||||| || ||||| |||||| | || |||||| ||
Sbjct 10684879 ATGGCCGAACCCT-AGCGGATTACAACATCCAGAAAGAGTCTACTCTTCACCTGGTCTTG 10684821
Query 26982 AGACTTAGAGGAGGAA 26997
|| |||||||| ||||
Sbjct 10684820 AGGCTTAGAGGTGGAA 10684805
Score = 82.4 bits (90), Expect = 7e-11
Identities = 151/220 (69%), Gaps = 1/220 (0%)
Strand=Plus/Minus
Query 26762 AAACAAA-ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAG 26820
|| |||| ||||| | || || ||||| |||| || || | || ||| |||| | |
Sbjct 6306343 AAGCAAAGATGCAGATCTTCGTGAAAACCCTAACAGGGAAGACAATTACCCTCGAGGTCG 6306284
Query 26821 AATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTC 26880
| || |||||||||||| | ||||| ||||| ||||| ||||| || ||||
Sbjct 6306283 AGTCCTCCGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCTC 6306224
Query 26881 CCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCG 26940
| || || || || | |||| || ||| || || ||||| || | | | | || ||
Sbjct 6306223 CGGACCAGCAGCGATTGATTTTCGCCGGAAAGCAGCTCGAGGACGGACGCACCCTCGCCG 6306164
Query 26941 ACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
|||| ||||| || || ||||| || | || || |||||
Sbjct 6306163 ACTACAACATCCAGAAGGAATCGACCCTTCACCTCGTCCT 6306124
>seq5
Length=16150104
Score = 82.4 bits (90), Expect = 7e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825
|| ||||| | || || ||||| |||| || || | || ||| | || | |||||
Sbjct 6389052 AACATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACCATAACCCTTGAGGTCGAATCC 6389111
Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885
|||||||||||| | |||||| ||||| ||||| || || || || || ||
Sbjct 6389112 TCCGACACCATCGACAATGTCAAAGCGAAGATCCAGGACAAGGAGGGAATTCCACCGGAC 6389171
Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945
|| || || | |||| || ||| ||||| || ||||| | | | || ||||||
Sbjct 6389172 CAGCAGCGATTAATTTTCGCCGGGAAACAGCTGGAAGACGGCCGTACGCTCGCCGACTAC 6389231
Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
|||||||| || || || || | |||||||| ||
Sbjct 6389232 AACATTCAGAAGGAGTCGACGCTGCATCTGGTGCT 6389266
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478653682361040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |