Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21]
1,457 sequences; 137,073,209 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq5 93.3 3e-14
>seq5
Length=16150104
Score = 93.3 bits (102), Expect = 3e-14
Identities = 152/217 (70%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| ||||||||| |||||||| || |||||||||||||| | || | ||||
Sbjct 6389266 AGCACCAGATGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGGCGAGCGTACGGCCGTCT 6389207
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842
|||| ||||| || || |||| | ||||| |||||| || | ||||| |||||
Sbjct 6389206 TCCAGCTGTTTCCCGGCGAAAATTAATCGCTGCTGGTCCGGTGGAATTCCCTCCTTGTCC 6389147
Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901
|| || ||| || || | | | | |||||| || || || | ||| ||||
Sbjct 6389146 TGGATCTTCGCT--TTGACATTGTCGATGGTGTCGGAGGATTCGACCTCAAGGGTTATGG 6389089
Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938
| || || || || ||||| || || |||||||| ||
Sbjct 6389088 TCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATGTT 6389052
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405080806776430
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |