Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21]
1,457 sequences; 137,073,209 total letters
Query= NC_008296.2
Length=177300
Score E
Sequences producing significant alignments: (Bits) Value
seq5 98.7 1e-15
>seq5
Length=16150104
Score = 98.7 bits (108), Expect = 1e-15
Identities = 209/310 (67%), Gaps = 3/310 (1%)
Strand=Plus/Plus
Query 167837 AACCCTTTCCATATGATGGGAGTTGCTGGTATCCTAGGCGGTGCATTGCTTTCTGCAATC 167896
||||| || |||||||| |||| || ||||| || |||| ||| || || | | ||
Sbjct 10049296 AACCCATTTTATATGATGAGAGTCGCCGGTATACTGGGCGCTGCTTTTCTATGCACTATT 10049355
Query 167897 CATGGTGTTACAGTAGAGAATACTCTGTATGAAGATGGTGAGCAAGCAAACACTTTCAAA 167956
||||||| || ||| | || | | ||| || ||||| | ||||| || || |
Sbjct 10049356 CATGGTGCTATTGTAAAATATCTTTTATATAAAAATGGTAATGGTGCAAATACATTAGAT 10049415
Query 167957 GCATTTGATACGACTCAGGAAGAGGAAACTTATTCCATGGTCACTGCTAACCGATTCTGG 168016
|| ||| |||| | ||| | || ||||||||||| ||| |||| || ||| | || |
Sbjct 10049416 GCTTTTAATACAAATCAAGTCGAAGAAACTTATTCAATGTTCACCGCAAACTGCTTTTTA 10049475
Query 168017 TCTCAAATTTTTGGTATTGCTTTCAGCAATAAGCGTTGGTTGCACTTCTTTATGCTTTTC 168076
|| ||||| ||||| |||| || ||||| || ||| | || |||||| | ||
Sbjct 10049476 TCACAAATATTTGGGGTTGCGTTTTCCAATAGAAGTCAGTT--ATTTATTTATGTTATTT 10049533
Query 168077 GTTCCTGTCATGGGACTTTGGACAAGTTCTATTGGTATCATCGGTCTCGCACTTAATCTT 168136
|| | ||| || | | || | ||| || |||| | || ||| || |||| ||
Sbjct 10049534 GTACTTGTAATTGATATGTGTATGAGTGCTCTTGGAGTAGTC-TTCTAGCTTTTAACCTA 10049592
Query 168137 CGTGCTTATG 168146
||||| ||||
Sbjct 10049593 CGTGCCTATG 10049602
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 567221669287200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |