Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21] 1,457 sequences; 137,073,209 total letters Query= NC_008296.2 Length=177300 Score E Sequences producing significant alignments: (Bits) Value seq5 98.7 1e-15 >seq5 Length=16150104 Score = 98.7 bits (108), Expect = 1e-15 Identities = 209/310 (67%), Gaps = 3/310 (1%) Strand=Plus/Plus Query 167837 AACCCTTTCCATATGATGGGAGTTGCTGGTATCCTAGGCGGTGCATTGCTTTCTGCAATC 167896 ||||| || |||||||| |||| || ||||| || |||| ||| || || | | || Sbjct 10049296 AACCCATTTTATATGATGAGAGTCGCCGGTATACTGGGCGCTGCTTTTCTATGCACTATT 10049355 Query 167897 CATGGTGTTACAGTAGAGAATACTCTGTATGAAGATGGTGAGCAAGCAAACACTTTCAAA 167956 ||||||| || ||| | || | | ||| || ||||| | ||||| || || | Sbjct 10049356 CATGGTGCTATTGTAAAATATCTTTTATATAAAAATGGTAATGGTGCAAATACATTAGAT 10049415 Query 167957 GCATTTGATACGACTCAGGAAGAGGAAACTTATTCCATGGTCACTGCTAACCGATTCTGG 168016 || ||| |||| | ||| | || ||||||||||| ||| |||| || ||| | || | Sbjct 10049416 GCTTTTAATACAAATCAAGTCGAAGAAACTTATTCAATGTTCACCGCAAACTGCTTTTTA 10049475 Query 168017 TCTCAAATTTTTGGTATTGCTTTCAGCAATAAGCGTTGGTTGCACTTCTTTATGCTTTTC 168076 || ||||| ||||| |||| || ||||| || ||| | || |||||| | || Sbjct 10049476 TCACAAATATTTGGGGTTGCGTTTTCCAATAGAAGTCAGTT--ATTTATTTATGTTATTT 10049533 Query 168077 GTTCCTGTCATGGGACTTTGGACAAGTTCTATTGGTATCATCGGTCTCGCACTTAATCTT 168136 || | ||| || | | || | ||| || |||| | || ||| || |||| || Sbjct 10049534 GTACTTGTAATTGATATGTGTATGAGTGCTCTTGGAGTAGTC-TTCTAGCTTTTAACCTA 10049592 Query 168137 CGTGCTTATG 168146 ||||| |||| Sbjct 10049593 CGTGCCTATG 10049602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 567221669287200