Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21]
1,457 sequences; 137,073,209 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq2 181 2e-40
>seq2
Length=13294645
Score = 181 bits (200), Expect = 2e-40
Identities = 407/602 (68%), Gaps = 12/602 (2%)
Strand=Plus/Plus
Query 42408 TTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTG 42467
||| ||||| || |||| ||||||||||||||||| ||||| || || ||||| ||
Sbjct 9186287 TTCATCAAACACGTACTCGCCTTCTTCGCCGCCTCAGACGGAATCGTTCTGGAGAATCTC 9186346
Query 42468 GCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGC-TTCTACGGCTTCCA 42526
|| || | || ||| || ||||| || |||||||| ||| |||||||| |||||
Sbjct 9186347 GCTTCCCGATTTATGTCCGATGTGCAAGTCTCGGAGGCGCG-TGCTTTCTACGGTTTCCA 9186405
Query 42527 GATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCT 42586
||| || || |||||| | ||||| ||| ||||| || ||| |||| ||||||
Sbjct 9186406 GATCGCGATTGAGAACATACACTCCGAGATGTACAGTCTCCTCCTCGACACTTACATCAA 9186465
Query 42587 GGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAA 42646
||| | ||| | || || ||| || || || || || || ||| || ||
Sbjct 9186466 GGACAACAAAGAGAGAGACCATCTCTTCCGCGCGATCGAAACCATCCCTTGCGTCGCCAA 9186525
Query 42647 GAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCT 42706
||| || | |||||| | || |||||||| | | | || || | |||||| |
Sbjct 9186526 GAAAGCCCAGTGGGCGATGAAGTGGATCGATGGATCTCA---GACTTTTGCCGAGAGAAT 9186582
Query 42707 GGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTG 42766
|| || || || ||||| || ||||||||||| || |||| ||| || |||||
Sbjct 9186583 CGTCGCTTTCGCCTGTGTCGAAGGTATCTTCTTCTCCGGTAGCTTCTGCTCGATTTTCTG 9186642
Query 42767 GCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGG 42825
||| || || |||| || ||||||||| | |||||||| ||||| | ||| | |
Sbjct 9186643 GCTGAAAAAGCGAGGTCTC-ATGCCCGGATTAACCTTCTCCAACGAGTTGATCTCACGAG 9186701
Query 42826 ACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGC 42885
|||| || | ||| | || || || || |||| ||| | | | | || ||||
Sbjct 9186702 ACGAAGGCTTACATTGCGATTTCGCGTG---CCTGATCTACACGCTCTTGTGGACGAAGC 9186758
Query 42886 CCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCC 42945
||| ||||||| || | | ||| || || ||||| |||||||||| ||||||
Sbjct 9186759 TCTCCGAGGAGCGCGTGAAGTCAATCGTCTGCGACGCCGTCGAGATCGAGAGGGAGTTTG 9186818
Query 42946 TCACGCAGTCGCTGCCCGTG-TCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTAC 43004
| | ||||| ||||| | |||| || |||||| ||||| ||| | |||||
Sbjct 9186819 TGTGCGACGCGCTG-CCGTGCGCGTTGGTAGGGATGAACAGTGACCTGATGAGTCAGTAC 9186877
Query 43005 AT 43006
||
Sbjct 9186878 AT 9186879
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944322001222320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |