Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21] 1,457 sequences; 137,073,209 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq2 181 2e-40 >seq2 Length=13294645 Score = 181 bits (200), Expect = 2e-40 Identities = 407/602 (68%), Gaps = 12/602 (2%) Strand=Plus/Plus Query 42408 TTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTG 42467 ||| ||||| || |||| ||||||||||||||||| ||||| || || ||||| || Sbjct 9186287 TTCATCAAACACGTACTCGCCTTCTTCGCCGCCTCAGACGGAATCGTTCTGGAGAATCTC 9186346 Query 42468 GCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGC-TTCTACGGCTTCCA 42526 || || | || ||| || ||||| || |||||||| ||| |||||||| ||||| Sbjct 9186347 GCTTCCCGATTTATGTCCGATGTGCAAGTCTCGGAGGCGCG-TGCTTTCTACGGTTTCCA 9186405 Query 42527 GATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCT 42586 ||| || || |||||| | ||||| ||| ||||| || ||| |||| |||||| Sbjct 9186406 GATCGCGATTGAGAACATACACTCCGAGATGTACAGTCTCCTCCTCGACACTTACATCAA 9186465 Query 42587 GGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAA 42646 ||| | ||| | || || ||| || || || || || || ||| || || Sbjct 9186466 GGACAACAAAGAGAGAGACCATCTCTTCCGCGCGATCGAAACCATCCCTTGCGTCGCCAA 9186525 Query 42647 GAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCT 42706 ||| || | |||||| | || |||||||| | | | || || | |||||| | Sbjct 9186526 GAAAGCCCAGTGGGCGATGAAGTGGATCGATGGATCTCA---GACTTTTGCCGAGAGAAT 9186582 Query 42707 GGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTG 42766 || || || || ||||| || ||||||||||| || |||| ||| || ||||| Sbjct 9186583 CGTCGCTTTCGCCTGTGTCGAAGGTATCTTCTTCTCCGGTAGCTTCTGCTCGATTTTCTG 9186642 Query 42767 GCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGG 42825 ||| || || |||| || ||||||||| | |||||||| ||||| | ||| | | Sbjct 9186643 GCTGAAAAAGCGAGGTCTC-ATGCCCGGATTAACCTTCTCCAACGAGTTGATCTCACGAG 9186701 Query 42826 ACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGC 42885 |||| || | ||| | || || || || |||| ||| | | | | || |||| Sbjct 9186702 ACGAAGGCTTACATTGCGATTTCGCGTG---CCTGATCTACACGCTCTTGTGGACGAAGC 9186758 Query 42886 CCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCC 42945 ||| ||||||| || | | ||| || || ||||| |||||||||| |||||| Sbjct 9186759 TCTCCGAGGAGCGCGTGAAGTCAATCGTCTGCGACGCCGTCGAGATCGAGAGGGAGTTTG 9186818 Query 42946 TCACGCAGTCGCTGCCCGTG-TCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTAC 43004 | | ||||| ||||| | |||| || |||||| ||||| ||| | ||||| Sbjct 9186819 TGTGCGACGCGCTG-CCGTGCGCGTTGGTAGGGATGAACAGTGACCTGATGAGTCAGTAC 9186877 Query 43005 AT 43006 || Sbjct 9186878 AT 9186879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944322001222320