Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21]
1,457 sequences; 137,073,209 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq1 107 2e-18
seq762 86.0 5e-12
seq6 86.0 5e-12
>seq1
Length=19836964
Score = 107 bits (118), Expect = 2e-18
Identities = 166/234 (71%), Gaps = 6/234 (3%)
Strand=Plus/Minus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
||||||||||| || || |||| |||||||| ||||||||| ||||||||||| ||
Sbjct 7692221 CCTCCTCTCAGACGGAGGACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAATCCGCG 7692162
Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020
| | | | |||| |||| ||||| ||||| || ||||| |||||||||||| |||
Sbjct 7692161 AGTGTCCTCCCGTCTTCCAGCTGCTTCCCGGCGAAAATCAGACGCTGCTGATCCGGCGGG 7692102
Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTT--AATGGAACTC-ACACTATCAGTAGATTCG 34077
| | || ||||| || || ||| || | || | | || | || ||
Sbjct 7692101 ATCCCTTCCTTGTCTTGGATCTTCGCCTTCACATTG---TCGATCGTGTCGGACGACTCA 7692045
Query 34078 CATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATTTTT 34131
|| | ||||| || || || ||||| ||||||||||||||||||||||||
Sbjct 7692044 ACCTCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATTTGCATTTTT 7691991
>seq762
Length=4953
Score = 86.0 bits (94), Expect = 5e-12
Identities = 82/105 (78%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969
|||| || || |||||||| || ||||||||| ||||||||||| ||||| |||
Sbjct 152 AGCCTGAGAACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCGGCCAAAGTTCGG 211
Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCC 34014
|||| ||||| ||||| ||||| || || || | ||||||||||
Sbjct 212 CCGTCCTCCAACTGCTTTCCGGCGAAGATAAGTCTCTGCTGATCC 256
>seq6
Length=18523719
Score = 86.0 bits (94), Expect = 5e-12
Identities = 82/105 (78%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969
|||| || || |||||||| || ||||||||| ||||||||||| ||||| |||
Sbjct 1438288 AGCCTGAGAACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCGGCCAAAGTTCGG 1438347
Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCC 34014
|||| ||||| ||||| ||||| || || || | ||||||||||
Sbjct 1438348 CCGTCCTCCAACTGCTTTCCGGCGAAGATAAGTCTCTGCTGATCC 1438392
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397055349288514
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |