Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21]
1,457 sequences; 137,073,209 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq2 122 2e-22
>seq2
Length=13294645
Score = 122 bits (134), Expect = 2e-22
Identities = 569/881 (65%), Gaps = 37/881 (4%)
Strand=Plus/Plus
Query 242875 TTCCCCATCCAGTATCCGGATATGTGGGATATGTATAAGAAGGCAGTGGCAACCTTTTGG 242934
||||| ||||| || || | || ||||| ||||| |||||||| | ||| | || |||
Sbjct 9186158 TTCCCGATCCAATACCCACAGATCTGGGAGATGTACAAGAAGGCCGAAGCATCTTTCTGG 9186217
Query 242935 ACCACCGAGGAAGTTCCTCTGAACGCA-GACG-TCGTCGACTGGCGCGAGAAACTCAATG 242992
|| |||| ||||| ||| |||| |||| ||| ||||||| ||||| || || |
Sbjct 9186218 ACGGCCGAAGAAGTCGATCTTT-CGCAAGACGGTCG-CGACTGG---GAGAATCTAAACG 9186272
Query 242993 ACGACGAACGTCATTTCATCAAACACATTCTAGGTTTTTTCGCAGGCTCCGATGGTATTG 243052
||| |||||| || |||||||||||| | || | || ||||| | ||| || || || |
Sbjct 9186273 ACGGCGAACGACACTTCATCAAACACGTACTCGCCTTCTTCGCCGCCTCAGACGGAATCG 9186332
Query 243053 TGATGGAAAATCT-GCAGACCAACTTTAGTGT-GGAAGTAACGGTTCCAGAGGCACGGCA 243110
| |||| ||||| || || | |||| ||| || || || | ||||| ||
Sbjct 9186333 TTCTGGAGAATCTCGCTTCCCGA-TTTA-TGTCCGATGTGCAAGTCTCGGAGGCGCGTGC 9186390
Query 243111 ATTTTATGCTTACCAAA----CATTCAACGAATCTATCCATTCTGAACAATATGCTCTTC 243166
|| || | || ||| | ||| | ||| || || || || || ||| |
Sbjct 9186391 TTTCTACGGTTTCCAGATCGCGATTGA--GAA--CATACACTCCGAGATGTACAGTCTCC 9186446
Query 243167 TTATCGACGCGCTTATTTCA--GATGAACAAGAGCGAAACGAGCTTTTCGACGCCATCGA 243224
| |||| | |||| ||| || | ||||| || || | || ||| ||| |||||
Sbjct 9186447 TCCTCGA--CACTTACATCAAGGACAACAAAGAGAGAGACCATCTCTTCCGCGCGATCGA 9186504
Query 243225 AAACATTCCGGCGGTTCATAACAAGGCAAAATGGGCTCAGAAGTGGCTAGAACCCGGTAA 243284
|| ||| || || || || || | ||||| ||||||| | || | |
Sbjct 9186505 AACCATCCCTTGCGTCGCCAAGAAAGCCCAGTGGGCGATGAAGTGGATCGATGGATCTCA 9186564
Query 243285 ATCATTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGAG 243344
| ||||| ||| | ||||||| | | || || |||||||| | || ||||| ||
Sbjct 9186565 GACTTTTGCCGAGAGAATCGTCGCTTTCGCCTGTGTCGAAGGTATCTTCTTCTCCGGTAG 9186624
Query 243345 TTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAA 243404
|||||| | || || |||||| || |||| | ||||| || | | || ||
Sbjct 9186625 CTTCTGCTCGATTTTCTGGCTGAAAAAGCGAGGTCTCATGCCCGGATTAACCTTCTCCAA 9186684
Query 243405 CGAGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCG-GTGAGCTTATGTATTCAA 243463
|||||| ||| || ||||| ||| | || | |||| ||| || || || |
Sbjct 9186685 CGAGTTGATCTCACGAGACGAAGGCTTACATTGCGATTTCGCGTG-CCTGATCTA---CA 9186740
Query 243464 AGCTC---CAGAACAAGCTACCATTCGA--AACG-GTCAAACAAATCATCACAGAAGCAG 243517
|||| || ||||| | ||| | || || || |||| || || || |
Sbjct 9186741 CGCTCTTGTGGACGAAGCT---CTCCGAGGAGCGCGTGAAGTCAATCGTCTGCGACGCCG 9186797
Query 243518 TTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACT 243577
| || | ||| | ||| || | |||||||| | || ||| | | | || ||||||
Sbjct 9186798 TCGAGATCGAGAGGGAGTTTGTGTGCGACGCGCTGCCGTGCGCGTTGGTAGGGATGAACA 9186857
Query 243578 CTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTT 243637
||| || ||| | |||||||| || || || || || | |||| ||||| || |
Sbjct 9186858 GTGACCTGATGAGTCAGTACATTGAGTTTGTGGCAGATAGGCTTTTGGGGGCGCTCGGGT 9186917
Query 243638 ATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAG 243697
| | || |||||| || || |||| | |||||| | || |||||||| |
Sbjct 9186918 ACGGTAAGGTGTACGGTGTGGCTAATCCGTTTGATTGGATGGAGTTAATCTCGCTTCAGG 9186977
Query 243698 GGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAA 243738
||||||| ||||||||||| ||| | || | ||||| |||
Sbjct 9186978 GGAAAACAAACTTCTTCGAGAAGAGAGTTGGCGATTACCAA 9187018
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102859411642950
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |