Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21] 1,457 sequences; 137,073,209 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq3 91.5 1e-13 seq4 87.8 1e-12 seq1 87.8 1e-12 seq6 82.4 5e-11 >seq3 Length=15215380 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 ||||| || || || ||||| ||||||||||| || | | | || || | ||| Sbjct 11243687 TGAAGTGTTGATTCCTTTTGGATGTTGTAATCTGCAAGGGTGCGACCATCCTCGAGCTGT 11243628 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || |||||| | || || | || |||||| | || ||||||||||| ||| || Sbjct 11243627 TTACCAGCGAAGATGAATCTCTATTGGTCCGGCGCGATCCCTTCCTTGTCTTGAATCTTT 11243568 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 | |||||| | || | ||| || | | || || || | |||||||||||| || || Sbjct 11243567 GTCTTTACATTATCAACAGTGTCTGAACTCTCAACTTCGAGGGTAATGGTTTTGCCAGTG 11243508 Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176 || ||||| ||||| |||||||| Sbjct 11243507 AGTGTTTTCACAAATATTTGCAT 11243485 >seq4 Length=14320061 Score = 87.8 bits (96), Expect = 1e-12 Identities = 144/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 |||||||| || || || || |||||||| ||| ||| | | |||| || | || Sbjct 6306133 TGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCGTCCTCGAGCTGC 6306192 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || || ||| | ||||| ||||| ||||| || |||||||||||||| || ||| Sbjct 6306193 TTTCCGGCGAAAATCAATCGCTGCTGGTCCGGAGGGATTCCTTCCTTGTCCTGGATCTTG 6306252 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || ||| | || || || ||| || || || | |||||| || || ||||| Sbjct 6306253 GCCTTGACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTAATTGTCTTCCCTGTT 6306312 Query 15154 AGAGTTTTTACAAAAATTTGCATATTTG 15181 || ||||| || || || ||||| |||| Sbjct 6306313 AGGGTTTTCACGAAGATCTGCATCTTTG 6306340 >seq1 Length=19836964 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || ||||| || || || || || ||||||||||| ||| | ||| ||||||| Sbjct 7692203 ACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAATCCGCGAGTGTCCTCCCGTCTTCC 7692144 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | || || || ||| | |||| |||||| || || || || ||||||||||| Sbjct 7692143 AGCTGCTTCCCGGCGAAAATCAGACGCTGCTGATCCGGCGGGATCCCTTCCTTGTCTTGG 7692084 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || || || ||| | || || || ||| || || |||| ||| || || || Sbjct 7692083 ATCTTCGCCTTCACATTGTCGATCGTGTCGGACGACTCAACCTCTAGGGTTATCGTCTTC 7692024 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATATTT 15180 || || || ||||| ||||| |||||||| ||| Sbjct 7692023 CCCGTTAGGGTTTTCACAAAGATTTGCATTTTT 7691991 >seq6 Length=18523719 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| || | | || || | ||| || ||||| || ||||| ||||||||||| | Sbjct 17514216 CCACCACGGAGACGTAGCACAAGATGGAGCGTAGACTCCTTTTGGATGTTGTAATCCGCG 17514157 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | ||||||| | ||||| || || | || | | ||| ||||| ||| Sbjct 17514156 AGGGTGCGTCCGTCTTCAAGCTGTTTCCCCGCAAAGATGAGTCTCTGCTGGTCTGGTGGG 17514097 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||||||||| ||| || || || | || || || || | | || || Sbjct 17514096 ATCCCTTCCTTGTCCTGAATCTTCGCCTTGACGTTATCGATTGTGTCTGAACTCTCAACC 17514037 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || |||||||| || || || || || |||||||| |||||| Sbjct 17514036 TCCAAAGTGATGGTTTTGCCCGTGAGGGTCTTGACAAAAATCTGCATA 17513989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357385653723245