Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21]
1,457 sequences; 137,073,209 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq2 120 5e-22
>seq2
Length=13294645
Score = 120 bits (132), Expect = 5e-22
Identities = 537/837 (64%), Gaps = 19/837 (2%)
Strand=Plus/Minus
Query 159648 TCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGT 159707
|||||||||| ||||| || || |||| | || ||| | ||||| | | || || |
Sbjct 9187001 TCTTCTCGAAGAAGTTTGTTTTCCCCTGAAGCGAGATTAACTCCATCCAATCAAACGGAT 9186942
Query 159708 TCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATT 159767
| ||| || ||| | ||||| ||| ||| | ||| ||||||||||| |
Sbjct 9186941 TAGCCACACCGTACACCTTACCGTACCCGAGCGCCCCCAAAAGCCTATCTGCCACAAACT 9186882
Query 159768 CGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGC-CTAACGGGGAGCGCTTCC 159826
| ||||| || |||| | |||| ||| ||||| | || | | |||| ||||| ||
Sbjct 9186881 CAATGTACTGACTCATCAGGTCACTGTTCATCCCTACCAACGCGCACGGC-AGCGCGTCG 9186823
Query 159827 GACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTCGTAC 159886
||| ||||||| |||| |||||||| || ||| || || | || || || |
Sbjct 9186822 CACACAAACTCCCTCTCGATCTCGACGGCGTCGCAGACGATTGACTTCACGCGCTCCTCG 9186763
Query 159887 CCCGGCTT-GCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCC 159945
|||| | ||| || | | | | | |||||||| || ||||| || | ||
Sbjct 9186762 GAGAGCTTCGTCCACAA----GAGCGTGTAGATCAGGCACGCGAAATCGCAATGTAAGCC 9186707
Query 159946 CTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTT 160005
||||| || ||||| ||||||||||| | | | | || ||||||| || ||| |||
Sbjct 9186706 TTCGTCTCGTGAGATCAACTCGTTGGAGAAGGTTAATCCGGGCATGAGACCTCGCTTTTT 9186647
Query 160006 GAGCCAAAAAATGGCCGCAAAAGC-ACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACG 160064
||||| ||||| | ||| |||| |||| || ||||| || || || || || |
Sbjct 9186646 CAGCCAGAAAATCG-AGCAGAAGCTACCGGAGAAGAAGATACCTTCGACACAGGCGAAAG 9186588
Query 160065 CCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAG 160124
| |||| ||||| ||||| | | | ||| | ||||| | | ||||| | |
Sbjct 9186587 CGACGATTCTCTCGGCAAAA---GTCTGAGATCCATCGATCCACTTCATCGCCCACTGGG 9186531
Query 160125 CCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACAATCTGTCCTGCTCCTTCA 160184
| ||||| |||| ||| || ||| |||| ||| || | ||| ||| ||
Sbjct 9186530 CTTTCTTGGCGACGCAAGGGATGGTTTCGATCGCGCGGAAGAGATGGTCTCTCTCTTTGT 9186471
Query 160185 CATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCGATGG 160244
|||||||| ||| | | || |||||| || | ||| | || || || |
Sbjct 9186470 TGTCCTTGATGTAAGTGTCGAGGAGGAGACTGTACATCTCGGAGTGTATGTTCTCAATCG 9186411
Query 160245 CCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATAC-TGCACCTCCTGTGTGAACCTT 160303
| ||||| || ||||||| ||||||| || || ||||| || | || |
Sbjct 9186410 CGATCTGGAAACCGTAGAAAGCACGCGCCTCC-GAGACTTGCACATCGGACATAAATCGG 9186352
Query 160304 TGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGAGAG 160363
| | ||||| | ||| | ||||| | ||| || ||||| || | ||||| |
Sbjct 9186351 GAAGCGAGATTCTCCAGAACGATTCCGTCTGAGGCGGCGAAGAAGGCGAGTACGTGTTTG 9186292
Query 160364 ATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGT-GTGTCACGTCTTGGGCCAA 160422
||||| |||| ||| | | ||| || || ||||||| | | | ||||||| | |
Sbjct 9186291 ATGAAGTGTCGTTCGCCGTCGTTTAG---ATTCTCCCAGTCGCGAC-CGTCTTGCGAAAG 9186236
Query 160423 ATCAACCTCTTCCGCGCTCCAATTGGCAGCCTGAGCAGTTTTGTACATGGCCCAGAT 160479
||| || ||||| || |||| | || | || | |||||||| |||||||
Sbjct 9186235 ATCGACTTCTTCGGCCGTCCAGAAAGATGCTTCGGCCTTCTTGTACATCTCCCAGAT 9186179
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795140718235920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |