Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21] 1,457 sequences; 137,073,209 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq2 120 5e-22 >seq2 Length=13294645 Score = 120 bits (132), Expect = 5e-22 Identities = 537/837 (64%), Gaps = 19/837 (2%) Strand=Plus/Minus Query 159648 TCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGT 159707 |||||||||| ||||| || || |||| | || ||| | ||||| | | || || | Sbjct 9187001 TCTTCTCGAAGAAGTTTGTTTTCCCCTGAAGCGAGATTAACTCCATCCAATCAAACGGAT 9186942 Query 159708 TCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATT 159767 | ||| || ||| | ||||| ||| ||| | ||| ||||||||||| | Sbjct 9186941 TAGCCACACCGTACACCTTACCGTACCCGAGCGCCCCCAAAAGCCTATCTGCCACAAACT 9186882 Query 159768 CGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGC-CTAACGGGGAGCGCTTCC 159826 | ||||| || |||| | |||| ||| ||||| | || | | |||| ||||| || Sbjct 9186881 CAATGTACTGACTCATCAGGTCACTGTTCATCCCTACCAACGCGCACGGC-AGCGCGTCG 9186823 Query 159827 GACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTCGTAC 159886 ||| ||||||| |||| |||||||| || ||| || || | || || || | Sbjct 9186822 CACACAAACTCCCTCTCGATCTCGACGGCGTCGCAGACGATTGACTTCACGCGCTCCTCG 9186763 Query 159887 CCCGGCTT-GCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCC 159945 |||| | ||| || | | | | | |||||||| || ||||| || | || Sbjct 9186762 GAGAGCTTCGTCCACAA----GAGCGTGTAGATCAGGCACGCGAAATCGCAATGTAAGCC 9186707 Query 159946 CTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTT 160005 ||||| || ||||| ||||||||||| | | | | || ||||||| || ||| ||| Sbjct 9186706 TTCGTCTCGTGAGATCAACTCGTTGGAGAAGGTTAATCCGGGCATGAGACCTCGCTTTTT 9186647 Query 160006 GAGCCAAAAAATGGCCGCAAAAGC-ACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACG 160064 ||||| ||||| | ||| |||| |||| || ||||| || || || || || | Sbjct 9186646 CAGCCAGAAAATCG-AGCAGAAGCTACCGGAGAAGAAGATACCTTCGACACAGGCGAAAG 9186588 Query 160065 CCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAG 160124 | |||| ||||| ||||| | | | ||| | ||||| | | ||||| | | Sbjct 9186587 CGACGATTCTCTCGGCAAAA---GTCTGAGATCCATCGATCCACTTCATCGCCCACTGGG 9186531 Query 160125 CCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACAATCTGTCCTGCTCCTTCA 160184 | ||||| |||| ||| || ||| |||| ||| || | ||| ||| || Sbjct 9186530 CTTTCTTGGCGACGCAAGGGATGGTTTCGATCGCGCGGAAGAGATGGTCTCTCTCTTTGT 9186471 Query 160185 CATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCGATGG 160244 |||||||| ||| | | || |||||| || | ||| | || || || | Sbjct 9186470 TGTCCTTGATGTAAGTGTCGAGGAGGAGACTGTACATCTCGGAGTGTATGTTCTCAATCG 9186411 Query 160245 CCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATAC-TGCACCTCCTGTGTGAACCTT 160303 | ||||| || ||||||| ||||||| || || ||||| || | || | Sbjct 9186410 CGATCTGGAAACCGTAGAAAGCACGCGCCTCC-GAGACTTGCACATCGGACATAAATCGG 9186352 Query 160304 TGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGAGAG 160363 | | ||||| | ||| | ||||| | ||| || ||||| || | ||||| | Sbjct 9186351 GAAGCGAGATTCTCCAGAACGATTCCGTCTGAGGCGGCGAAGAAGGCGAGTACGTGTTTG 9186292 Query 160364 ATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGT-GTGTCACGTCTTGGGCCAA 160422 ||||| |||| ||| | | ||| || || ||||||| | | | ||||||| | | Sbjct 9186291 ATGAAGTGTCGTTCGCCGTCGTTTAG---ATTCTCCCAGTCGCGAC-CGTCTTGCGAAAG 9186236 Query 160423 ATCAACCTCTTCCGCGCTCCAATTGGCAGCCTGAGCAGTTTTGTACATGGCCCAGAT 160479 ||| || ||||| || |||| | || | || | |||||||| ||||||| Sbjct 9186235 ATCGACTTCTTCGGCCGTCCAGAAAGATGCTTCGGCCTTCTTGTACATCTCCCAGAT 9186179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795140718235920