Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21] 1,457 sequences; 137,073,209 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq6 159 8e-34 seq1 143 6e-29 seq762 141 2e-28 seq642 136 9e-27 seq4 129 1e-24 seq5 116 9e-21 seq3 114 3e-20 seq477 102 2e-16 >seq6 Length=18523719 Score = 159 bits (176), Expect = 8e-34 Identities = 166/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||| |||||||||||||| |||| |||||||| ||||||||| Sbjct 17514666 CGAAGACGAAGAACCAAGTGAAGAGTCGACTCCTTCTGGATATTGTAGTCGGCCAAAGTC 17514607 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || ||||| || || ||||||||||| | ||| ||||||||| || ||| Sbjct 17514606 CGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGCCTCTGTTGGTCCGGAGGGATCCCT 17514547 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| ||||||| |||| ||||||| | || || ||||| Sbjct 17514546 TCCTTGTCCTGAATCTTAGCCTTCACGTTGTCGATTGTGTCTGAGCTCTCAACCTCCAAG 17514487 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || | ||| |||||||| ||||| Sbjct 17514486 GTAATAGTCTTGCCTGTCAAAGTCTTCACAAATATTTG 17514449 Score = 141 bits (156), Expect = 2e-28 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || || || || || || || ||||||||||| |||| |||||| || |||||||| Sbjct 1438285 CGGAGCCTGAGAACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCGGCCAAAGTT 1438344 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || |||| |||||||||||||||||| || | |||||| |||||| ||| ||| Sbjct 1438345 CGGCCGTCCTCCAACTGCTTTCCGGCGAAGATAAGTCTCTGCTGATCCGGAGGAATACCT 1438404 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| || ||| |||| |||||| | |||| || || | Sbjct 1438405 TCCTTATCCTGGATCTTGGCTTTAACGTTGTCGATGGTGTCAGAGCTTTCCACCTCGAGG 1438464 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || |||||||| || || || || || Sbjct 1438465 GTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTG 1438502 Score = 140 bits (154), Expect = 8e-28 Identities = 151/200 (76%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 ||||| || ||||| || |||| |||||||||||| | || | |||||||| |||||| Sbjct 17513964 TGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGCGAGTGTGCGACCATCTTCTAGCTGC 17513905 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || ||||||||||| || | ||||||||||||| |||||| ||| || || |||||| Sbjct 17513904 TTACCGGCGAAGATAAGCCTCTGCTGGTCCGGAGGAATTCCCTCTTTATCTTGGATCTTT 17513845 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 || || |||| |||||| | | || || || | ||||| ||||| || || Sbjct 17513844 GCTTTGACATTGTCGATGGTGTCAGAGCTCTCGACCTCGAGAGTGATGGTCTTGCCTGTT 17513785 Query 199607 AGAGTTTTCACAAAAATTTG 199626 | |||||||||||| ||||| Sbjct 17513784 AAAGTTTTCACAAAGATTTG 17513765 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||| ||||| || ||||||||||||| |||||| || || | || | ||| ||| Sbjct 17514201 AGCACAAGATGGAGCGTAGACTCCTTTTGGATGTTGTAATCCGCGAGGGTGCGTCCGTCT 17514142 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||| || || || |||||||| | ||||||||| || || ||||| ||| Sbjct 17514141 TCAAGCTGTTTCCCCGCAAAGATGAGTCTCTGCTGGTCTGGTGGGATCCCTTCCTTGTCC 17514082 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| ||| |||| ||||||| | || || ||||| ||||| || Sbjct 17514081 TGAATCTTCGCCTTGACGTTATCGATTGTGTCTGAACTCTCAACCTCCAAAGTGATGGTT 17514022 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || || |||||||| || Sbjct 17514021 TTGCCCGTGAGGGTCTTGACAAAAATCTG 17513993 Score = 136 bits (150), Expect = 9e-27 Identities = 141/185 (76%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| || |||||||| || |||| |||||| ||||||| || | ||||| Sbjct 1442904 AGGACCAAGTGAAGGGTCGACTCTTTCTGGATGTTGTAATCAGCCAGTGTGCGACCATCC 1442963 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||||||||| |||||||||||||||||||||||||| |||||||| || Sbjct 1442964 TCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCT 1443023 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||||||| || | |||||| | | || || |||| ||||| ||| Sbjct 1443024 TGAATCTTGGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCCACCTCCAGTGTGATGGTC 1443083 Query 199598 TTACC 199602 || || Sbjct 1443084 TTGCC 1443088 Score = 136 bits (150), Expect = 9e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || ||||| || || | |||||| || || ||||| |||| |||||| || |||||||| Sbjct 1443187 CGGAGTCTGAGAACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAATCGGCCAAAGTA 1443246 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || ||||||| |||||||||||||||||| || | ||||| |||||| ||| || Sbjct 1443247 CGGCCGTCTTCCAACTGCTTTCCGGCGAAGATAAGCCTTTGCTGATCCGGAGGAATACCC 1443306 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| || ||| |||| |||||| | |||| || || | Sbjct 1443307 TCCTTGTCCTGGATCTTGGCTTTAACGTTGTCGATGGTGTCAGAGCTTTCAACCTCGAGG 1443366 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || |||||||| || || || || || Sbjct 1443367 GTGATAGTCTTCCCGGTGAGAGTCTTAACGAAGATCTG 1443404 Score = 122 bits (134), Expect = 2e-22 Identities = 138/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | || || |||||||| || |||| ||||| ||||||| || | ||||| Sbjct 1438001 AGGACCAAATGAAGGGTCGACTCTTTCTGGATATTGTAATCAGCCAGTGTGCGACCATCC 1438060 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||||||||| |||||||||||||||||||||||||| || ||||| || Sbjct 1438061 TCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATACCTTCCTTATCT 1438120 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||||| || | |||||| | | || || |||| ||||| ||| Sbjct 1438121 TGGATCTTGGCCTTCACGTTGTCAATGGTGTCCGAGCTCTCCACCTCCAGTGTGATGGTC 1438180 Query 199598 TTACC 199602 ||||| Sbjct 1438181 TTACC 1438185 Score = 114 bits (126), Expect = 3e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 199421 ACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCC 199480 |||||||| || || || ||||| |||| ||||| || || | || | ||||| ||| Sbjct 17514426 ACAAGGTGAAGGGTTGATTCCTTCTGGATATTGTAATCCGCAAGTGTGCGACCATCCTCC 17514367 Query 199481 AGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGA 199540 ||||| || || ||||||||||| | ||| ||||| || || ||||| |||||| Sbjct 17514366 AGCTGTTTCCCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGGATCCCTTCCTTGTCCTGA 17514307 Query 199541 ATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTA 199600 |||||| ||| ||| |||| ||||||| | || || || | || || || || Sbjct 17514306 ATCTTTGCCTTGACGTTATCGATTGTGTCTGAGCTCTCAACCTCAAGAGTAATGGTTTTC 17514247 Query 199601 CCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || |||||||||||||| || Sbjct 17514246 CCGGTAAGGGTTTTCACAAAAATCTG 17514221 Score = 105 bits (116), Expect = 2e-17 Identities = 81/96 (84%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 200934 ACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCA 200993 ||||||||||||||||||||||||||| || || | |||||||||||||||||| |||| Sbjct 1438380 ACTTATCTTCGCCGGAAAGCAGTTGGAGGACGGCCGAACTTTGGCCGATTACAACATCCA 1438321 Query 200994 GAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 ||| ||||| || ||||| || ||| | || || || Sbjct 1438320 GAAGGAGTCGACCCTTCATCTCGTTCTCAGGCTCCG 1438285 Score = 104 bits (114), Expect = 6e-17 Identities = 80/95 (84%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994 ||||||||||||||||||||||||||||| || | |||||||||||||||||| ||||| Sbjct 1443281 CTTATCTTCGCCGGAAAGCAGTTGGAAGACGGCCGTACTTTGGCCGATTACAACATCCAG 1443222 Query 200995 AAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 || || || || || ||| | ||| | ||||| || Sbjct 1443221 AAGGAATCCACCCTCCACTTGGTTCTCAGACTCCG 1443187 >seq1 Length=19836964 Score = 143 bits (158), Expect = 6e-29 Identities = 163/218 (75%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| || ||||||||||| |||| |||||| || || | ||||| || ||| Sbjct 7692206 AGGACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAATCCGCGAGTGTCCTCCCGTCT 7692147 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| |||||||| || ||||||||||| ||||| || ||||| || Sbjct 7692146 TCCAGCTGCTTCCCGGCGAAAATCAGACGCTGCTGATCCGGCGGGATCCCTTCCTTGTCT 7692087 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| |||||| |||| ||||| | | || || || | || |||||| Sbjct 7692086 TGGATCTTCGCCTTCACATTGTCGATCGTGTCGGACGACTCAACCTCTAGGGTTATCGTC 7692027 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 || ||||| || ||||||||||| ||||| |||||| Sbjct 7692026 TTCCCCGTTAGGGTTTTCACAAAGATTTG---CATTTT 7691992 >seq762 Length=4953 Score = 141 bits (156), Expect = 2e-28 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || || || || || || || ||||||||||| |||| |||||| || |||||||| Sbjct 149 CGGAGCCTGAGAACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCGGCCAAAGTT 208 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || |||| |||||||||||||||||| || | |||||| |||||| ||| ||| Sbjct 209 CGGCCGTCCTCCAACTGCTTTCCGGCGAAGATAAGTCTCTGCTGATCCGGAGGAATACCT 268 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| || ||| |||| |||||| | |||| || || | Sbjct 269 TCCTTATCCTGGATCTTGGCTTTAACGTTGTCGATGGTGTCAGAGCTTTCCACCTCGAGG 328 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || |||||||| || || || || || Sbjct 329 GTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTG 366 Score = 136 bits (150), Expect = 9e-27 Identities = 141/185 (76%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| || |||||||| || |||| |||||| ||||||| || | ||||| Sbjct 4769 AGGACCAAGTGAAGGGTCGACTCTTTCTGGATGTTGTAATCAGCCAGTGTGCGACCATCC 4828 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||||||||| |||||||||||||||||||||||||| |||||||| || Sbjct 4829 TCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCT 4888 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||||||| || | |||||| | | || || |||| ||||| ||| Sbjct 4889 TGAATCTTGGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCCACCTCCAGTGTGATGGTC 4948 Query 199598 TTACC 199602 || || Sbjct 4949 TTGCC 4953 Score = 105 bits (116), Expect = 2e-17 Identities = 81/96 (84%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 200934 ACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCA 200993 ||||||||||||||||||||||||||| || || | |||||||||||||||||| |||| Sbjct 244 ACTTATCTTCGCCGGAAAGCAGTTGGAGGACGGCCGAACTTTGGCCGATTACAACATCCA 185 Query 200994 GAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 ||| ||||| || ||||| || ||| | || || || Sbjct 184 GAAGGAGTCGACCCTTCATCTCGTTCTCAGGCTCCG 149 >seq642 Length=6837 Score = 136 bits (150), Expect = 9e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || ||||| || || | |||||| || || ||||| |||| |||||| || |||||||| Sbjct 148 CGGAGTCTGAGAACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAATCGGCCAAAGTA 207 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || ||||||| |||||||||||||||||| || | ||||| |||||| ||| || Sbjct 208 CGGCCGTCTTCCAACTGCTTTCCGGCGAAGATAAGCCTTTGCTGATCCGGAGGAATACCC 267 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| || ||| |||| |||||| | |||| || || | Sbjct 268 TCCTTGTCCTGGATCTTGGCTTTAACGTTGTCGATGGTGTCAGAGCTTTCAACCTCGAGG 327 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || |||||||| || || || || || Sbjct 328 GTGATAGTCTTCCCGGTGAGAGTCTTAACGAAGATCTG 365 Score = 104 bits (114), Expect = 6e-17 Identities = 80/95 (84%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994 ||||||||||||||||||||||||||||| || | |||||||||||||||||| ||||| Sbjct 242 CTTATCTTCGCCGGAAAGCAGTTGGAAGACGGCCGTACTTTGGCCGATTACAACATCCAG 183 Query 200995 AAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 || || || || || ||| | ||| | ||||| || Sbjct 182 AAGGAATCCACCCTCCACTTGGTTCTCAGACTCCG 148 >seq4 Length=14320061 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || ||||| ||||| |||| ||||||||| || | || | ||| || Sbjct 6306124 AGGACGAGGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCGTCC 6306183 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||||||||||||||| || | ||||||||||||||| |||||||| ||| Sbjct 6306184 TCGAGCTGCTTTCCGGCGAAAATCAATCGCTGCTGGTCCGGAGGGATTCCTTCCTTGTCC 6306243 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || |||| |||||| | | || || || | || || ||| Sbjct 6306244 TGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTAATTGTC 6306303 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || |||||||| || || || Sbjct 6306304 TTCCCTGTTAGGGTTTTCACGAAGATCTG 6306332 Score = 84.2 bits (92), Expect = 5e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994 || || || || || ||||| | |||||||| | || | || ||||||||| ||||| Sbjct 10684907 CTGATATTTGCTGGTAAGCAACTTGAAGATGGCCGAACCCTAGCGGATTACAACATCCAG 10684848 Query 200995 AAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 201030 |||||||||||||||||||| || ||||| ||| || Sbjct 10684847 AAAGAGTCTACTCTTCACCTGGTCTTGAGGCTTAGA 10684812 >seq5 Length=16150104 Score = 116 bits (128), Expect = 9e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || || || || ||||||||||| || | ||||||||| || | || | || ||| Sbjct 6389266 AGCACCAGATGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGGCGAGCGTACGGCCGTCT 6389207 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||||||| || |||||||| || | |||||||||||||| |||||| || ||| Sbjct 6389206 TCCAGCTGTTTCCCGGCGAAAATTAATCGCTGCTGGTCCGGTGGAATTCCCTCCTTGTCC 6389147 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| || || |||| |||||| | | ||| || || | || || ||| Sbjct 6389146 TGGATCTTCGCTTTGACATTGTCGATGGTGTCGGAGGATTCGACCTCAAGGGTTATGGTC 6389087 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || |||||||| || || || Sbjct 6389086 TTCCCCGTTAGGGTTTTCACGAAGATCTG 6389058 Score = 98.7 bits (108), Expect = 2e-15 Identities = 71/81 (88%), Gaps = 1/81 (1%) Strand=Plus/Minus Query 199440 CCTTT-TGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 ||||| |||| |||||||||||||||||| | |||||||| ||||| |||||||||||| Sbjct 3143153 CCTTTCTGGATGTTGTAGTCAGCCAAAGTTCGGCCATCTTCGAGCTGTTTTCCGGCGAAG 3143094 Query 199499 ATGAGACGCTGCTGGTCCGGA 199519 || | ||||||||||||||| Sbjct 3143093 ATCAATCGCTGCTGGTCCGGA 3143073 >seq3 Length=15215380 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || |||||||| || || || |||||||||| |||||| || || | || Sbjct 11243705 CGAAGACGCAACACAAGGTGAAGTGTTGATTCCTTTTGGATGTTGTAATCTGCAAGGGTG 11243646 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || ||||| || || |||||||||| | || |||||||| || ||| Sbjct 11243645 CGACCATCCTCGAGCTGTTTACCAGCGAAGATGAATCTCTATTGGTCCGGCGCGATCCCT 11243586 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || ||||||||| ||| || || || ||||||| | || || || | Sbjct 11243585 TCCTTGTCTTGAATCTTTGTCTTTACATTATCAACAGTGTCTGAACTCTCAACTTCGAGG 11243526 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || ||||| ||||||||||| ||||| Sbjct 11243525 GTAATGGTTTTGCCAGTGAGTGTTTTCACAAATATTTG 11243488 Score = 114 bits (126), Expect = 3e-20 Identities = 152/210 (72%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC-CTTCCATC 199476 || |||||||| ||||| ||||| || || | ||| || || || |||||| | ||||| Sbjct 11243925 AGAACAAGGTGAAGAGTAGACTCTTTCTGAATGTTATAATCCGCTAAAGTCGCGACCATC 11243866 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 ||| ||||| || ||||| ||||| || | |||||||||||| || |||||| || Sbjct 11243865 TTCGAGCTGATTCCCGGCAAAGATTAGCCTCTGCTGGTCCGGTTGGATGCCTTCTTTATC 11243806 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 |||||||| |||||| || | | || | |||| || || | ||||| || Sbjct 11243805 TTGAATCTTGGCCTTCACATTATCAATCATATCAGAGCTTTCAACCTCAAGAGTGATGGT 11243746 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||||| | ||| || ||||| || || Sbjct 11243745 CTTACCCGTCAAAGTCTTGACAAAGATCTG 11243716 Score = 87.8 bits (96), Expect = 4e-12 Identities = 71/85 (84%), Gaps = 1/85 (1%) Strand=Plus/Plus Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAG-GACTTTGGCCGATTACAACGTCCA 200993 || ||||| ||||| || ||| | |||||||| | |||||| || ||||| ||| | || Sbjct 11243839 CTAATCTTTGCCGGGAATCAGCTCGAAGATGGTCGCGACTTTAGCGGATTATAACATTCA 11243898 Query 200994 GAAAGAGTCTACTCTTCACCTTGTT 201018 ||||||||||||||||||||||||| Sbjct 11243899 GAAAGAGTCTACTCTTCACCTTGTT 11243923 >seq477 Length=12660 Score = 102 bits (112), Expect = 2e-16 Identities = 72/81 (89%), Gaps = 1/81 (1%) Strand=Plus/Plus Query 199440 CCTTT-TGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 ||||| |||| |||||||||||||||||| | |||||||| |||||||||||||||||| Sbjct 338 CCTTTCTGGATGTTGTAGTCAGCCAAAGTTCGGCCATCTTCGAGCTGCTTTCCGGCGAAG 397 Query 199499 ATGAGACGCTGCTGGTCCGGA 199519 || | ||||||||||||||| Sbjct 398 ATCAATCGCTGCTGGTCCGGA 418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178899592112619