Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21] 1,457 sequences; 137,073,209 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq5 82.4 5e-11 >seq5 Length=16150104 Score = 82.4 bits (90), Expect = 5e-11 Identities = 159/233 (68%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 39491 CGCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGG 39550 |||| || || | ||| || |||| ||||| || || || || || || || |||| Sbjct 6389283 CGCCACCACGGAGACGGAGCACCAGATGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGG 6389224 Query 39551 CCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGG 39610 | | || | || |||| ||||||||| | |||||||| |||||||| |||| | Sbjct 6389223 CGAGCGTACGGCCGTCTTCCAGCTGTTTCCCGGCGAAAATTAATCGCTGCTGGTCCGGTG 6389164 Query 39611 GTACGCCTTCTTTGTCGCATATTTTTTGTTTAA--TCGTCGCTACTGTGTCTGCGCTTTC 39668 | | || || ||||| || || ||| | | |||| | ||||| | | ||| Sbjct 6389163 GAATTCCCTCCTTGTCCTGGATCTTCGCTTTGACATTGTCGATG--GTGTCGGAGGATTC 6389106 Query 39669 CACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATGT 39721 || || | || || || || ||||||| ||||| |||||||||||||||| Sbjct 6389105 GACCTCAAGGGTTATGGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATGT 6389053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347363431692881