Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21]
1,457 sequences; 137,073,209 total letters
Query= NC_015279.1
Length=190789
Score E
Sequences producing significant alignments: (Bits) Value
seq113 105 8e-18
seq2 105 8e-18
>seq113
Length=54118
Score = 105 bits (116), Expect = 8e-18
Identities = 127/173 (73%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 171909 CTGGACGCTGCAGATGAAGCGGGGGTTGATGCTCCATATTCCTGCCGTGCCGGTGCCTGT 171968
|| ||||| || || ||||| ||| | ||| || || || |||||||| ||| | ||
Sbjct 24703 CTCGACGCGGCGGAGGAAGCAGGGATCGATTTGCCTTACTCTTGCCGTGCTGGTTCTTGC 24644
Query 171969 TCCAGCTGTGCTGGTAAACTTGAGAGTGGTACGGTAGATCAGTCAGAGCAATCTTTCCTT 172028
|| |||||||| |||||| ||| ||| | || || ||||| || || |||||||
Sbjct 24643 TCGAGCTGTGCCGGTAAAGTTGTAGCTGGATCTGTTGACCAGTCTGACCAGAGTTTCCTT 24584
Query 172029 GATGATGATCAAATGGACGCAGGATTCGTTCTGACCTGTGTTGCTTATCCTAC 172081
|||||||| || || | | ||| || ||||| || |||| |||||||||||
Sbjct 24583 GATGATGACCAGATTGGTGAAGGGTTTGTTCTCACTTGTGCGGCTTATCCTAC 24531
>seq2
Length=13294645
Score = 105 bits (116), Expect = 8e-18
Identities = 127/173 (73%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 171909 CTGGACGCTGCAGATGAAGCGGGGGTTGATGCTCCATATTCCTGCCGTGCCGGTGCCTGT 171968
|| ||||| || || ||||| ||| | ||| || || || |||||||| ||| | ||
Sbjct 3079485 CTCGACGCGGCGGAGGAAGCAGGGATCGATTTGCCTTACTCTTGCCGTGCTGGTTCTTGC 3079544
Query 171969 TCCAGCTGTGCTGGTAAACTTGAGAGTGGTACGGTAGATCAGTCAGAGCAATCTTTCCTT 172028
|| |||||||| |||||| ||| ||| | || || ||||| || || |||||||
Sbjct 3079545 TCGAGCTGTGCCGGTAAAGTTGTAGCTGGATCTGTTGACCAGTCTGACCAGAGTTTCCTT 3079604
Query 172029 GATGATGATCAAATGGACGCAGGATTCGTTCTGACCTGTGTTGCTTATCCTAC 172081
|||||||| || || | | ||| || ||||| || |||| |||||||||||
Sbjct 3079605 GATGATGACCAGATTGGTGAAGGGTTTGTTCTCACTTGTGCGGCTTATCCTAC 3079657
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 610385683148280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |