Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21]
1,457 sequences; 137,073,209 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq7 122 1e-22
seq4 118 1e-21
>seq7
Length=17055980
Score = 122 bits (134), Expect = 1e-22
Identities = 151/205 (74%), Gaps = 4/205 (2%)
Strand=Plus/Minus
Query 153768 CAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 153827
|||||||||||| |||| ||||| || || |||||||||||||| ||||| || || ||
Sbjct 14440332 CAAAGGTTTGGTGTTCCAATGGGTTACGGTGGTCCTCATGCTGCGTTCTTGGCTACTTCA 14440273
Query 153828 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGG--TCAGTCAGTAGATAGTGAAG 153885
| |||||||||||| ||| || || || ||| | || ||||| || || | ||
Sbjct 14440272 CAAGAGTATAAGAGAATGATGCCAGGGAGGATTATTGGTATCAGT--GTTGACTCTTCAG 14440215
Query 153886 GTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAG 153945
| || |||| | | || | || |||||||| |||||||| ||||| |||||||
Sbjct 14440214 GAAAGCAAGCTCTGCGTATGGCGATGCAAACTAGAGAACAGCATATTAGGAGGGACAAAG 14440155
Query 153946 CAACCAGTAACATCTGCACAGCTCA 153970
| || || |||||||| || || ||
Sbjct 14440154 CCACTAGCAACATCTGTACTGCCCA 14440130
Score = 82.4 bits (90), Expect = 9e-11
Identities = 117/165 (71%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 153264 GAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGA 153323
|||||||| ||||||||| |||||||| || ||||||||||| |||||||| |
Sbjct 14440833 GAGAATCCGGCTTGGTACACTCAATACACTCCTTACCAAGCTGAGATCTCTCAGGGTCGT 14440774
Query 153324 TTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCA 153383
| || | | |||||| ||| ||| | || || || || || || | || || |
Sbjct 14440773 CTCGAGTCGCTGCTCAATTTCCAGACGATGATAACCGATCTCACGGGGCTTCCCATGTCT 14440714
Query 153384 AACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 153428
|||||||| || | || |||| || ||||| || || ||||||
Sbjct 14440713 AACGCATCGCTGCTCGACGAAGGGACCGCAGCTGCCGAGGCAATG 14440669
>seq4
Length=14320061
Score = 118 bits (130), Expect = 1e-21
Identities = 129/170 (76%), Gaps = 1/170 (1%)
Strand=Plus/Minus
Query 153264 GAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGA 153323
||||||||| ||||||||| |||||||| |||||||||||||| || || ||||||
Sbjct 2232059 GAGAATCCTGCTTGGTACACTCAATACACTCCTTATCAAGCTGAGATCTCACAAGGAAGA 2232000
Query 153324 TTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCA 153383
| || || | |||||| ||||||| | ||||| || || || || |||| || |
Sbjct 2231999 CTCGAGTCTCTTCTCAATTTCCAAACGGTAATCACTGATCTCACTGGTCTACCTATGTCG 2231940
Query 153384 AACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAAT-GCTAT 153432
||||| ||| | | ||||||| || ||||| || |||||||| |||||
Sbjct 2231939 AACGCTTCTTTGCTCGATGAAGGTACAGCAGCCGCGGAAGCAATGGCTAT 2231890
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579202251086880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |