Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21] 1,457 sequences; 137,073,209 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq7 122 1e-22 seq4 118 1e-21 >seq7 Length=17055980 Score = 122 bits (134), Expect = 1e-22 Identities = 151/205 (74%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 153768 CAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 153827 |||||||||||| |||| ||||| || || |||||||||||||| ||||| || || || Sbjct 14440332 CAAAGGTTTGGTGTTCCAATGGGTTACGGTGGTCCTCATGCTGCGTTCTTGGCTACTTCA 14440273 Query 153828 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGG--TCAGTCAGTAGATAGTGAAG 153885 | |||||||||||| ||| || || || ||| | || ||||| || || | || Sbjct 14440272 CAAGAGTATAAGAGAATGATGCCAGGGAGGATTATTGGTATCAGT--GTTGACTCTTCAG 14440215 Query 153886 GTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAG 153945 | || |||| | | || | || |||||||| |||||||| ||||| ||||||| Sbjct 14440214 GAAAGCAAGCTCTGCGTATGGCGATGCAAACTAGAGAACAGCATATTAGGAGGGACAAAG 14440155 Query 153946 CAACCAGTAACATCTGCACAGCTCA 153970 | || || |||||||| || || || Sbjct 14440154 CCACTAGCAACATCTGTACTGCCCA 14440130 Score = 82.4 bits (90), Expect = 9e-11 Identities = 117/165 (71%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 153264 GAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGA 153323 |||||||| ||||||||| |||||||| || ||||||||||| |||||||| | Sbjct 14440833 GAGAATCCGGCTTGGTACACTCAATACACTCCTTACCAAGCTGAGATCTCTCAGGGTCGT 14440774 Query 153324 TTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCA 153383 | || | | |||||| ||| ||| | || || || || || || | || || | Sbjct 14440773 CTCGAGTCGCTGCTCAATTTCCAGACGATGATAACCGATCTCACGGGGCTTCCCATGTCT 14440714 Query 153384 AACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 153428 |||||||| || | || |||| || ||||| || || |||||| Sbjct 14440713 AACGCATCGCTGCTCGACGAAGGGACCGCAGCTGCCGAGGCAATG 14440669 >seq4 Length=14320061 Score = 118 bits (130), Expect = 1e-21 Identities = 129/170 (76%), Gaps = 1/170 (1%) Strand=Plus/Minus Query 153264 GAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGA 153323 ||||||||| ||||||||| |||||||| |||||||||||||| || || |||||| Sbjct 2232059 GAGAATCCTGCTTGGTACACTCAATACACTCCTTATCAAGCTGAGATCTCACAAGGAAGA 2232000 Query 153324 TTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCA 153383 | || || | |||||| ||||||| | ||||| || || || || |||| || | Sbjct 2231999 CTCGAGTCTCTTCTCAATTTCCAAACGGTAATCACTGATCTCACTGGTCTACCTATGTCG 2231940 Query 153384 AACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAAT-GCTAT 153432 ||||| ||| | | ||||||| || ||||| || |||||||| ||||| Sbjct 2231939 AACGCTTCTTTGCTCGATGAAGGTACAGCAGCCGCGGAAGCAATGGCTAT 2231890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579202251086880