Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21] 1,457 sequences; 137,073,209 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq4 127 2e-24 seq7 120 4e-22 >seq4 Length=14320061 Score = 127 bits (140), Expect = 2e-24 Identities = 127/165 (77%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 157939 GAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGA 157998 ||||||||| ||||||||| |||||||| |||||||||||||| || || |||||| Sbjct 2232059 GAGAATCCTGCTTGGTACACTCAATACACTCCTTATCAAGCTGAGATCTCACAAGGAAGA 2232000 Query 157999 TTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCA 158058 | || || | |||||| ||||||| | ||||| || ||||| || ||||| || | Sbjct 2231999 CTCGAGTCTCTTCTCAATTTCCAAACGGTAATCACTGATCTCACTGGTCTACCTATGTCG 2231940 Query 158059 AACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103 ||||| ||| | | ||||||| || ||||| || ||||||||| Sbjct 2231939 AACGCTTCTTTGCTCGATGAAGGTACAGCAGCCGCGGAAGCAATG 2231895 >seq7 Length=17055980 Score = 120 bits (132), Expect = 4e-22 Identities = 152/207 (73%), Gaps = 4/207 (2%) Strand=Plus/Minus Query 158443 CAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 158502 |||||||||||| |||| ||||| ||||| |||||||||||||| ||||| || || || Sbjct 14440332 CAAAGGTTTGGTGTTCCAATGGGTTACGGTGGTCCTCATGCTGCGTTCTTGGCTACTTCA 14440273 Query 158503 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGG--TCAGTCAGTAGATAGCGAAG 158560 | |||||||||||| ||| || || || ||| | || ||||| || || || Sbjct 14440272 CAAGAGTATAAGAGAATGATGCCAGGGAGGATTATTGGTATCAGT--GTTGACTCTTCAG 14440215 Query 158561 GTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAG 158620 | || |||| | | || | || |||||||| |||||||| || || ||||||| Sbjct 14440214 GAAAGCAAGCTCTGCGTATGGCGATGCAAACTAGAGAACAGCATATTAGGAGGGACAAAG 14440155 Query 158621 CAACCAGTAACATCTGCACAGCACAAG 158647 | || || |||||||| || || |||| Sbjct 14440154 CCACTAGCAACATCTGTACTGCCCAAG 14440128 Score = 91.5 bits (100), Expect = 2e-13 Identities = 119/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 157939 GAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGA 157998 |||||||| ||||||||| |||||||| || ||||||||||| |||||||| | Sbjct 14440833 GAGAATCCGGCTTGGTACACTCAATACACTCCTTACCAAGCTGAGATCTCTCAGGGTCGT 14440774 Query 157999 TTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCA 158058 | || | | |||||| ||| ||| | || || || ||||| || || || || | Sbjct 14440773 CTCGAGTCGCTGCTCAATTTCCAGACGATGATAACCGATCTCACGGGGCTTCCCATGTCT 14440714 Query 158059 AACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103 |||||||| || | || |||| || ||||| || || |||||| Sbjct 14440713 AACGCATCGCTGCTCGACGAAGGGACCGCAGCTGCCGAGGCAATG 14440669 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/111 (78%), Gaps = 4/111 (4%) Strand=Plus/Minus Query 159693 TGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGTGG 159752 ||| || ||||| || ||||| || | || ||||| ||||||||||| ||||||||||| Sbjct 14438410 TGGAGCGGATGTGTGCCATCTCAATCTCCACAAGACCTTCTGTATTCCTCATGGAGGTGG 14438351 Query 159753 AGGTCCTGGCGTAGGTCCTATTGGTGT--AGCAAAACATCTCACACCATTT 159801 || ||||| | ||||| |||||||| ||| ||||| | |||||||| Sbjct 14438350 TGGGCCTGGAATGGGTCCCATTGGTGTGAAGC--AACATTTAGCACCATTT 14438302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588040490117520