Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21]
1,457 sequences; 137,073,209 total letters
Query= NC_015288.1
Length=191195
Score E
Sequences producing significant alignments: (Bits) Value
seq5 105 8e-18
>seq5
Length=16150104
Score = 105 bits (116), Expect = 8e-18
Identities = 221/327 (68%), Gaps = 3/327 (1%)
Strand=Plus/Plus
Query 183706 AACTGGACGTTAAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTA 183765
|| |||| || ||||| || |||||||| |||| || |||||||| || | || |
Sbjct 10049284 AATTGGATATTGAACCCATTTTATATGATGAGAGTCGCCGGTATACTGGGCGCTGCTTTT 10049343
Query 183766 CTCAGTGCTATCCATGGTGTCACAGTAGAGAATACATTGTATGAAGATGGAGAACAAGCA 183825
|| | |||| ||||||| | ||| | || || ||| || |||| | |||
Sbjct 10049344 CTATGCACTATTCATGGTGCTATTGTAAAATATCTTTTATATAAAAATGGTAATGGTGCA 10049403
Query 183826 AACACATTCAAGGCATTTGATTCCACTCAAGAAGAAGAGACGTATTCTATGGTTACAGCG 183885
|| ||||| | || ||| || | | ||||| ||||| || ||||| ||| | || ||
Sbjct 10049404 AATACATTAGATGCTTTTAATACAAATCAAGTCGAAGAAACTTATTCAATGTTCACCGCA 10049463
Query 183886 AATCGTTTCTGGTCACAAATCTTCGGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTC 183945
|| | || | |||||||| || |||||||||||| ||||| || ||| | ||
Sbjct 10049464 AACTGCTTTTTATCACAAATATTTGGGGTTGCGTTTTCCAATAGAAGTCAGTT--ATTTA 10049521
Query 183946 TTTATGTTGTTTGTTCCTGTCATGGGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTT 184005
|||||||| ||||| | ||| || | | | || | | || |||| | | | ||
Sbjct 10049522 TTTATGTTATTTGTACTTGTAATTGATATGTGTATGAGTGCTCTTGG-AGTAGTCTTCTA 10049580
Query 184006 GCTCTTAATCTTCGTGCTTATGATTTT 184032
||| |||| || ||||| |||| ||||
Sbjct 10049581 GCTTTTAACCTACGTGCCTATGGTTTT 10049607
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 611684859486600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |