Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21] 1,457 sequences; 137,073,209 total letters Query= NC_015288.1 Length=191195 Score E Sequences producing significant alignments: (Bits) Value seq5 105 8e-18 >seq5 Length=16150104 Score = 105 bits (116), Expect = 8e-18 Identities = 221/327 (68%), Gaps = 3/327 (1%) Strand=Plus/Plus Query 183706 AACTGGACGTTAAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTA 183765 || |||| || ||||| || |||||||| |||| || |||||||| || | || | Sbjct 10049284 AATTGGATATTGAACCCATTTTATATGATGAGAGTCGCCGGTATACTGGGCGCTGCTTTT 10049343 Query 183766 CTCAGTGCTATCCATGGTGTCACAGTAGAGAATACATTGTATGAAGATGGAGAACAAGCA 183825 || | |||| ||||||| | ||| | || || ||| || |||| | ||| Sbjct 10049344 CTATGCACTATTCATGGTGCTATTGTAAAATATCTTTTATATAAAAATGGTAATGGTGCA 10049403 Query 183826 AACACATTCAAGGCATTTGATTCCACTCAAGAAGAAGAGACGTATTCTATGGTTACAGCG 183885 || ||||| | || ||| || | | ||||| ||||| || ||||| ||| | || || Sbjct 10049404 AATACATTAGATGCTTTTAATACAAATCAAGTCGAAGAAACTTATTCAATGTTCACCGCA 10049463 Query 183886 AATCGTTTCTGGTCACAAATCTTCGGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTC 183945 || | || | |||||||| || |||||||||||| ||||| || ||| | || Sbjct 10049464 AACTGCTTTTTATCACAAATATTTGGGGTTGCGTTTTCCAATAGAAGTCAGTT--ATTTA 10049521 Query 183946 TTTATGTTGTTTGTTCCTGTCATGGGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTT 184005 |||||||| ||||| | ||| || | | | || | | || |||| | | | || Sbjct 10049522 TTTATGTTATTTGTACTTGTAATTGATATGTGTATGAGTGCTCTTGG-AGTAGTCTTCTA 10049580 Query 184006 GCTCTTAATCTTCGTGCTTATGATTTT 184032 ||| |||| || ||||| |||| |||| Sbjct 10049581 GCTTTTAACCTACGTGCCTATGGTTTT 10049607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611684859486600