Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21]
1,457 sequences; 137,073,209 total letters
Query= NC_015289.1
Length=176184
Score E
Sequences producing significant alignments: (Bits) Value
seq5 123 3e-23
seq3 87.8 2e-12
>seq5
Length=16150104
Score = 123 bits (136), Expect = 3e-23
Identities = 228/332 (69%), Gaps = 3/332 (1%)
Strand=Plus/Plus
Query 166686 AACTGGACACTGAACCCATTTCATATGATGGGTGTAGCAGGTATTCTCGGTGGTGCATTG 166745
|| |||| | ||||||||||| |||||||| | || || ||||| || || | ||| ||
Sbjct 10049284 AATTGGATATTGAACCCATTTTATATGATGAGAGTCGCCGGTATACTGGGCGCTGCTTTT 10049343
Query 166746 CTTTCTGCCATCCATGGTGTTACAGTAGAGAACACTCTGTATCAAGATGGTGAACAGGCA 166805
|| | | || ||||||| || ||| | | | | ||| || ||||| | |||
Sbjct 10049344 CTATGCACTATTCATGGTGCTATTGTAAAATATCTTTTATATAAAAATGGTAATGGTGCA 10049403
Query 166806 AATACTTTCAAGGCATTCGACTCTACTCAAGAGGAAGAAACCTATTCAATGGTTACAGCA 166865
||||| || | || || | | | ||||| |||||||| ||||||||| | || |||
Sbjct 10049404 AATACATTAGATGCTTTTAATACAAATCAAGTCGAAGAAACTTATTCAATGTTCACCGCA 10049463
Query 166866 AACCGCTATTGGTCTCAGATCTTCGGTATTGCGTTTAGTAATAAGAGGTGGTTGCATTTC 166925
||| ||| || || || || || || |||||||| |||| || ||| ||||
Sbjct 10049464 AACTGCTTTTTATCACAAATATTTGGGGTTGCGTTTTCCAATAGAAGTCAGTT--ATTTA 10049521
Query 166926 TTTATGCTGTTTGTTCCTGTTATGGGTCTGTGGACAAGTTCCATCGGTATTATTGGTCTT 166985
|||||| | ||||| | ||| || | | |||| | ||| | | || | || | |||
Sbjct 10049522 TTTATGTTATTTGTACTTGTAATTGATATGTGTATGAGTGCTCTTGG-AGTAGTCTTCTA 10049580
Query 166986 GCTCTCAACCTTCGTGCTTATGACTTTGTTTC 167017
||| | ||||| ||||| |||| ||| ||||
Sbjct 10049581 GCTTTTAACCTACGTGCCTATGGTTTTTTTTC 10049612
>seq3
Length=15215380
Score = 87.8 bits (96), Expect = 2e-12
Identities = 90/118 (76%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 165015 AACCATGGATGAATGGTTGTACAACGGTGGTCCTTACCAGTTGGTTGTCTTCCACTTCCT 165074
|||| | ||||||||| | |||||||||| |||||| | | || | | ||||| |
Sbjct 6417513 AACCGTTGATGAATGGCTATACAACGGTGTTCCTTATGAACTAATTTTTCTACACTTTTT 6417454
Query 165075 CATCGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTGTCTTACCGCCTCGGTATG 165132
| ||||||||||| || |||||||||||||||||||| || ||| || ||||||
Sbjct 6417453 ACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATG 6417396
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 563650534327680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |