Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21]
1,457 sequences; 137,073,209 total letters
Query= NC_019401.1
Length=358663
Score E
Sequences producing significant alignments: (Bits) Value
seq67 111 4e-19
seq5 111 4e-19
>seq67
Length=74208
Score = 111 bits (122), Expect = 4e-19
Identities = 321/477 (67%), Gaps = 24/477 (5%)
Strand=Plus/Minus
Query 150307 AGAAGGTAAACTTGATCCACTAATTGGTCGCGA--AACTGAACTTGATGATCTAATTCAG 150364
|| ||| || ||||||||| | |||||||| || || || | || || | | |
Sbjct 68420 AGCAGGGAAGCTTGATCCAGTGATTGGTCGGGATGAAGAGATCA-GAAGAGTTG-TGAGG 68363
Query 150365 ATTCTTTCTCGTAAAACCAAAAAGAATG--GTGCGTTAGTTGGTGAACCAGGTGTTGGTA 150422
||||| || | | ||| || || ||| |||| ||| | || |||||||| ||||| |
Sbjct 68362 ATTCTATCAAGAAGAACAAAGAACAATCCAGTGC-TTA-TCGGAGAACCAGGAGTTGGAA 68305
Query 150423 AAACACAAATCGTTGACGGATTAGCACAACGCATCGCTAATGGTGATGTTCC--AGATTC 150480
||||| | ||||| || ||||||||| | || | || || |||||||| | | ||
Sbjct 68304 AAACAGCTGTGGTTGAAGGTTTAGCACAAAGGATTGTGAAAGGAGATGTTCCTAACAGTC 68245
Query 150481 TATGAAAGATGTTGAAATTC-TTTCTTTGAATATGGGTGCATTTACTGCTGGTACTAAGT 150539
| | ||||| || ||| |||||||| | ||||||||||| |||||| ||||||
Sbjct 68244 TTTCC--GATGT-GAGATTGATTTCTTTGGACATGGGTGCATTAGTCGCTGGTGCTAAGT 68188
Query 150540 ATCGTGGTGAATTCGAAGAACGTGTAGACAATTTG--CTACAAGAACTAAAAGAACGCGA 150597
| || || || || |||||| | | || ||| || ||| ||||| | | ||| ||
Sbjct 68187 ACCGGGGAGAGTTTGAAGAAAG-ATTGA-AATCTGTTCTAAAAGAAGTTGAGGAAGCTGA 68130
Query 150598 TG---ATGTTATTCTGTTCATCGATGAAATCCATACTATTATGGGTGCTGGTGCGACTGG 150654
| | || ||||| ||||| ||||| |||||| || | ||||||||| |||
Sbjct 68129 AGGCAAAGTGATTCTCTTCATTGATGAGATCCATCTGGTTCTTGGTGCTGGTAAAACT-- 68072
Query 150655 CGGCGGTTCTTTGGATATGAGCAATATGTTAAAACCTGCTCTATCTCGCGGTGAAATTCG 150714
| || || ||||| | ||| |||| || ||| || || | ||| | | ||
Sbjct 68071 -GAAGGGTCGATGGATGCGGCTAATCTGTTCAAGCCTATGTTAGCTAGAGGTCAGCTACG 68013
Query 150715 TGTCATCGGTGCAACAACCTACGATGAATATCGTAAACACATTGAAAAAGATGCAGC 150771
||| ||||| ||||| || || ||| | ||| | |||| |||||||| ||
Sbjct 68012 ATGCATTGGTGCTACAACACTTGAAGAGTATAGGAAATATGTTGAGAAAGATGCTGC 67956
>seq5
Length=16150104
Score = 111 bits (122), Expect = 4e-19
Identities = 321/477 (67%), Gaps = 24/477 (5%)
Strand=Plus/Minus
Query 150307 AGAAGGTAAACTTGATCCACTAATTGGTCGCGA--AACTGAACTTGATGATCTAATTCAG 150364
|| ||| || ||||||||| | |||||||| || || || | || || | | |
Sbjct 13613107 AGCAGGGAAGCTTGATCCAGTGATTGGTCGGGATGAAGAGATCA-GAAGAGTTG-TGAGG 13613050
Query 150365 ATTCTTTCTCGTAAAACCAAAAAGAATG--GTGCGTTAGTTGGTGAACCAGGTGTTGGTA 150422
||||| || | | ||| || || ||| |||| ||| | || |||||||| ||||| |
Sbjct 13613049 ATTCTATCAAGAAGAACAAAGAACAATCCAGTGC-TTA-TCGGAGAACCAGGAGTTGGAA 13612992
Query 150423 AAACACAAATCGTTGACGGATTAGCACAACGCATCGCTAATGGTGATGTTCC--AGATTC 150480
||||| | ||||| || ||||||||| | || | || || |||||||| | | ||
Sbjct 13612991 AAACAGCTGTGGTTGAAGGTTTAGCACAAAGGATTGTGAAAGGAGATGTTCCTAACAGTC 13612932
Query 150481 TATGAAAGATGTTGAAATTC-TTTCTTTGAATATGGGTGCATTTACTGCTGGTACTAAGT 150539
| | ||||| || ||| |||||||| | ||||||||||| |||||| ||||||
Sbjct 13612931 TTTCC--GATGT-GAGATTGATTTCTTTGGACATGGGTGCATTAGTCGCTGGTGCTAAGT 13612875
Query 150540 ATCGTGGTGAATTCGAAGAACGTGTAGACAATTTG--CTACAAGAACTAAAAGAACGCGA 150597
| || || || || |||||| | | || ||| || ||| ||||| | | ||| ||
Sbjct 13612874 ACCGGGGAGAGTTTGAAGAAAG-ATTGA-AATCTGTTCTAAAAGAAGTTGAGGAAGCTGA 13612817
Query 150598 TG---ATGTTATTCTGTTCATCGATGAAATCCATACTATTATGGGTGCTGGTGCGACTGG 150654
| | || ||||| ||||| ||||| |||||| || | ||||||||| |||
Sbjct 13612816 AGGCAAAGTGATTCTCTTCATTGATGAGATCCATCTGGTTCTTGGTGCTGGTAAAACT-- 13612759
Query 150655 CGGCGGTTCTTTGGATATGAGCAATATGTTAAAACCTGCTCTATCTCGCGGTGAAATTCG 150714
| || || ||||| | ||| |||| || ||| || || | ||| | | ||
Sbjct 13612758 -GAAGGGTCGATGGATGCGGCTAATCTGTTCAAGCCTATGTTAGCTAGAGGTCAGCTACG 13612700
Query 150715 TGTCATCGGTGCAACAACCTACGATGAATATCGTAAACACATTGAAAAAGATGCAGC 150771
||| ||||| ||||| || || ||| | ||| | |||| |||||||| ||
Sbjct 13612699 ATGCATTGGTGCTACAACACTTGAAGAGTATAGGAAATATGTTGAGAAAGATGCTGC 13612643
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1147568976997586
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |