Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21] 1,457 sequences; 137,073,209 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq2 149 1e-30 >seq2 Length=13294645 Score = 149 bits (164), Expect = 1e-30 Identities = 425/647 (66%), Gaps = 10/647 (2%) Strand=Plus/Minus Query 48040 AAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTTAACGCGGGACTCTGAGGG 48099 ||||||| |||| |||| ||||| || | || || ||| ||||| ||| ||| | Sbjct 9186817 AAACTCCCTCTCGATCTCGACGGCGTCGCAGACGATTGACTTCACGCGCTCCTCGGAGAG 9186758 Query 48100 TTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTC 48159 || | | || | || || |||| || ||| || || || | || ||||||||||| Sbjct 9186757 CTTCGTCCACAAGAGCGTG---TAGATCAGGCACGCGAAATCGCAATGTAAGCCTTCGTC 9186701 Query 48160 CCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCA 48219 || ||| | | ||||||||||| | || ||||||| || | || ||| ||||| Sbjct 9186700 TCGTGAGATCAACTCGTTGGAGAAGGTTAATCCGGGCATGAGACCTCGCTTTTTCAGCCA 9186641 Query 48220 GAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAG 48279 |||||| | ||| || ||||||||||| || || || ||||| ||| || Sbjct 9186640 GAAAATCGAGCAGAAGCTACCGGAGAAGAAGATACCTTCGACACAGGCGAAAGCGACGAT 9186581 Query 48280 CCTCTCTCCGAAAGAA-GCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCT 48338 ||||| | |||| | | || || |||||| | |||||| | || |||| Sbjct 9186580 TCTCTCGGCAAAAGTCTGAGATCCA-TC---GATCCACTTCATCGCCCACTGGGCTTTCT 9186525 Query 48339 TCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCG 48398 | || ||| || || || || || || |||||||| | | | ||| |||| Sbjct 9186524 TGGCGACGCAAGGGATGGTTTCGATCGCGCGGAAGAGATGGTCTCTCTCTTTGTTGTCCT 9186465 Query 48399 CAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCT 48458 | || || ||| || ||||||||| ||||| | ||||| || ||||||| Sbjct 9186464 TGATGTAAGTGTCGAGGAGGAGACTGTACATCTCGGAGTGTATGTTCTCAATCGCGATCT 9186405 Query 48459 GGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGC- 48517 |||| |||||||| || | ||||| | || ||||| || | |||| ||| Sbjct 9186404 GGAAACCGTAGAAAGCACGCGCCTCCGAGACTTGCACATCGGACATAAATC-GGGAAGCG 9186346 Query 48518 AGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAA 48577 |||||||| || || || ||||| || || |||||||| || || ||||| | ||| Sbjct 9186345 AGATTCTCCAGAACGATTCCGTCTGAGGCGGCGAAGAAGGCGAGTACGTGTTTGATGAAG 9186286 Query 48578 TGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCT 48637 || || ||| || | | ||| | |||| | | |||||| || || |||||| Sbjct 9186285 TGTCGTTCGCCGTCGTTTAGATTCTCCCAGTCGCGACCGTCTTGCGAAAGATCGACTTCT 9186226 Query 48638 TCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCATAT 48684 || | |||||||| || || || || |||||||| |||| || Sbjct 9186225 TCGGCCGTCCAGAAAGATGCTTCGGCCTTCTTGTACATCTCCCAGAT 9186179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931515834458880