Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21]
1,457 sequences; 137,073,209 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq2 107 4e-18
>seq2
Length=13294645
Score = 107 bits (118), Expect = 4e-18
Identities = 422/652 (65%), Gaps = 20/652 (3%)
Strand=Plus/Plus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| |||||||||||||||||||| || || |||||| |||||||| | |||||
Sbjct 9186179 ATCTGGGAGATGTACAAGAAGGCCGAAGCATCTTTCTGGACGGCCGAAGAAGTCGATCTT 9186238
Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGTAC 25596
| | ||| || |||| | |||| | | | ||| | || || |||| ||
Sbjct 9186239 TCGCAAGACGGTCGCGACTGGGAGAATCTAAACGACGGCGAACGACACTTCATCAAACAC 9186298
Query 25597 GTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTC 25656
|| | || ||||| || ||||| || || || || |||||||| ||||
Sbjct 9186299 GTACTCGCCTTCTTCGCCGCCTCAGACGGAATCGTTCTGGAGAATCTCGCTTCCCGATTT 9186358
Query 25657 ACCAGGGAAGTGCAGTACGTGGAGGCCAAGTG-TTTCTACGGTTTCCAGATGGCCATCGA 25715
| || ||||| | |||||| ||| |||||||||||||||||| || || ||
Sbjct 9186359 ATGTCCGATGTGCAAGTCTCGGAGGCGC-GTGCTTTCTACGGTTTCCAGATCGCGATTGA 9186417
Query 25716 AAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGAT---GACGTACATTACAGACGTCGC 25772
|| | ||||| ||| |||| || || || | || ||||| | ||| |
Sbjct 9186418 GAACATACACTCCGAGATGTA---CAGTCTCCTCCTCGACACTTACATCAAGGACAACAA 9186474
Query 25773 CGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCG 25832
|||||||| | || || | || ||||| ||| || || || | ||| || |
Sbjct 9186475 AGAGAGAGACCATCTCTTCCGCGCGATCGAAACCATCCCTTGCGTCGCCAAGAAAGCCCA 9186534
Query 25833 GTGGGCCATGAAGTGGATCAACAGCCAGAGCGC-TACGTTTGGCGAGCGGCTGGTAGCCT 25891
|||||| |||||||||||| | || | | || |||| |||| | | || || |
Sbjct 9186535 GTGGGCGATGAAGTGGATC----GATGGATCTCAGACTTTTGCCGAGAGAATCGTCGCTT 9186590
Query 25892 TTGCTGCTGTGGAGGGCATCTTTTTCAGCGGT-TCGTTTGCGGCCATCTTCTGGCTCAAG 25950
| || ||| || || ||||| ||| |||| | | ||| | || |||||||| ||
Sbjct 9186591 TCGCCTGTGTCGAAGGTATCTTCTTCTCCGGTAGCTTCTGC-TCGATTTTCTGGCTGAAA 9186649
Query 25951 CAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGT 26010
|| || ||||||||| | ||| ||||||||| | ||| | ||||| ||
Sbjct 9186650 AAGCGAGGTCTCATGCCCGGATTAACCTTCTCCAACGAGTTGATCTCACGAGACGAAGGC 9186709
Query 26011 CTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCT-TCTCA 26069
| || | ||||| || |||||| |||||||| | |||| | || || || || |
Sbjct 9186710 TTACATTGCGATTTCGCGTGCCTGATCTACACG---CTCTTG-TGGACGAAGCTCTCCGA 9186765
Query 26070 AGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTT 26121
||| ||| | ||| || || || || |||||||||| |||||||
Sbjct 9186766 GGAGCGCGTGAAGTCAATCGTCTGCGACGCCGTCGAGATCGAGAGGGAGTTT 9186817
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928827883414080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |