Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21] 1,457 sequences; 137,073,209 total letters Query= NC_019516.1 Length=161440 Score E Sequences producing significant alignments: (Bits) Value seq5 91.5 2e-13 >seq5 Length=16150104 Score = 91.5 bits (100), Expect = 2e-13 Identities = 226/341 (66%), Gaps = 3/341 (1%) Strand=Plus/Plus Query 10326 TCCAGGGCTTTCATAATTGGACGCTCAATCCCTTCCATATGATGGGAGTTGCTGGTATAC 10385 |||| | ||| | ||||||| | || || || |||||||| |||| || ||||||| Sbjct 10049270 TCCAAGTGTTTTAAAATTGGATATTGAACCCATTTTATATGATGAGAGTCGCCGGTATAC 10049329 Query 10386 TGGGAGGGGCGCTCCTATCAGCAATCCACGGAGTCACTGTAGAAAACACACTTTATCAAG 10445 |||| | || | |||| | || || || | | |||| || | | ||| || Sbjct 10049330 TGGGCGCTGCTTTTCTATGCACTATTCATGGTGCTATTGTAAAATATCTTTTATATAAAA 10049389 Query 10446 ATGGCGAACAAGCAAACACTTTCAAAGCTTTTGATAGCACTCAAGAAGAAGAGACCTATT 10505 |||| | ||||| || || | |||||| ||| | ||||| ||||| || |||| Sbjct 10049390 ATGGTAATGGTGCAAATACATTAGATGCTTTTAATACAAATCAAGTCGAAGAAACTTATT 10049449 Query 10506 CGATGGTTACTGCTAACCGTTTCTGGTCCCAGATATTTGGAATTGCTTTTAGCAATAAAC 10565 | ||| | || || ||| | || | || || |||||||| |||| ||| ||||| | Sbjct 10049450 CAATGTTCACCGCAAACTGCTTTTTATCACAAATATTTGGGGTTGCGTTTTCCAATAGAA 10049509 Query 10566 GCTGGCTTCATTTCTTTATGCTGTTTGTACCTGTTATGGGTCTTTGGACCTCTTCTATTG 10625 | | | |||| |||||| | ||||||| ||| || | | | || | | || ||| Sbjct 10049510 GTCAG--TTATTTATTTATGTTATTTGTACTTGTAATTGATATGTGTATGAGTGCTCTTG 10049567 Query 10626 GAATCATTGGTCTTGCTCTCAATCTTCGTGCTTACGATTTT 10666 || | | | ||| ||| | || || ||||| || | |||| Sbjct 10049568 GAGT-AGTCTTCTAGCTTTTAACCTACGTGCCTATGGTTTT 10049607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 516470593608000