Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21]
1,457 sequences; 137,073,209 total letters
Query= NC_019516.1
Length=161440
Score E
Sequences producing significant alignments: (Bits) Value
seq5 91.5 2e-13
>seq5
Length=16150104
Score = 91.5 bits (100), Expect = 2e-13
Identities = 226/341 (66%), Gaps = 3/341 (1%)
Strand=Plus/Plus
Query 10326 TCCAGGGCTTTCATAATTGGACGCTCAATCCCTTCCATATGATGGGAGTTGCTGGTATAC 10385
|||| | ||| | ||||||| | || || || |||||||| |||| || |||||||
Sbjct 10049270 TCCAAGTGTTTTAAAATTGGATATTGAACCCATTTTATATGATGAGAGTCGCCGGTATAC 10049329
Query 10386 TGGGAGGGGCGCTCCTATCAGCAATCCACGGAGTCACTGTAGAAAACACACTTTATCAAG 10445
|||| | || | |||| | || || || | | |||| || | | ||| ||
Sbjct 10049330 TGGGCGCTGCTTTTCTATGCACTATTCATGGTGCTATTGTAAAATATCTTTTATATAAAA 10049389
Query 10446 ATGGCGAACAAGCAAACACTTTCAAAGCTTTTGATAGCACTCAAGAAGAAGAGACCTATT 10505
|||| | ||||| || || | |||||| ||| | ||||| ||||| || ||||
Sbjct 10049390 ATGGTAATGGTGCAAATACATTAGATGCTTTTAATACAAATCAAGTCGAAGAAACTTATT 10049449
Query 10506 CGATGGTTACTGCTAACCGTTTCTGGTCCCAGATATTTGGAATTGCTTTTAGCAATAAAC 10565
| ||| | || || ||| | || | || || |||||||| |||| ||| ||||| |
Sbjct 10049450 CAATGTTCACCGCAAACTGCTTTTTATCACAAATATTTGGGGTTGCGTTTTCCAATAGAA 10049509
Query 10566 GCTGGCTTCATTTCTTTATGCTGTTTGTACCTGTTATGGGTCTTTGGACCTCTTCTATTG 10625
| | | |||| |||||| | ||||||| ||| || | | | || | | || |||
Sbjct 10049510 GTCAG--TTATTTATTTATGTTATTTGTACTTGTAATTGATATGTGTATGAGTGCTCTTG 10049567
Query 10626 GAATCATTGGTCTTGCTCTCAATCTTCGTGCTTACGATTTT 10666
|| | | | ||| ||| | || || ||||| || | ||||
Sbjct 10049568 GAGT-AGTCTTCTAGCTTTTAACCTACGTGCCTATGGTTTT 10049607
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 516470593608000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |