Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21] 1,457 sequences; 137,073,209 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq3 89.7 4e-13 >seq3 Length=15215380 Score = 89.7 bits (98), Expect = 4e-13 Identities = 161/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||||||||| |||||| | || || |||||||||||| |||| || |||| Sbjct 11243485 ATGCAAATATTTGTGAAAACACTCACTGGCAAAACCATTACCCTCGAAGTTGAGAGTTCA 11243544 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAG-AGGGAGTGC-CCGTAGATC 28671 || || || | || | ||| ||| || ||||| | ||||| || ||| || | Sbjct 11243545 GACACTGTTGATAATGTAAAGACAAAGATTCAAGACAAGGAAGGGATCGCGCCG--GACC 11243602 Query 28672 AACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATA 28731 || ||||| | ||||| || || ||||| | || ||| | || | || ||||| | Sbjct 11243603 AATAGAGATTCATCTTCGCTGGTAAACAGCTCGAGGATGGTCGCACCCTTGCAGATTACA 11243662 Query 28732 ACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 |||| ||||| ||||| || || ||| | || || | | || || ||||| Sbjct 11243663 ACATCCAAAAGGAATCAACACTTCACCTTGTGTTGCGTCTTCGTGGTGGGAT 11243714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425397246007203