Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21]
1,457 sequences; 137,073,209 total letters
Query= NC_020486.1
Length=171211
Score E
Sequences producing significant alignments: (Bits) Value
seq1 105 7e-18
seq820 87.8 2e-12
>seq1
Length=19836964
Score = 105 bits (116), Expect = 7e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 158325 GTGTGAAGACGACCAGTACATCCTTGACGCAGCTGAGGAAGCGGGTGTCGAACTCAATTA 158384
||| ||||||||| ||| |||| ||||| || |||||||| ||| |||| | |||
Sbjct 3424997 GTGCGAAGACGACGTCTACGTCCTCGACGCTGCGGAGGAAGCCGGTATCGATTTGCCTTA 3425056
Query 158385 CTCGTGCCGTGCAGGCGCTTGTTCGTCGTGTGCGGGAAAACTCGTCTCTGGCACCGTAGA 158444
||| |||||||| || |||| || || || || ||| |||||||||| || | ||
Sbjct 3425057 CTCTTGCCGTGCCGGATCTTGCTCTAGCTGCGCCGGTAAAGTCGTCTCTGGATCCATTGA 3425116
Query 158445 CCAAAGCGACCAGTCCTTCCTGGACGATGACCAAATCGATTCTGGTTTCATTCTGACTTG 158504
||| |||||| |||| | ||||||||||| || || || | | || || ||
Sbjct 3425117 CCAGTCGGACCAGAGCTTCTTAGACGATGACCAGATGAATGACGGCTATGTCCTCACCTG 3425176
Query 158505 TGTTTCTTATCCTACAAGTGATTGTGTGATTGAGACTGACAAGGAAGA 158552
||| |||| || || |||| || ||||| || |||| |||||
Sbjct 3425177 TGTGGCTTACCCGACTTCTGATGTCGTCATTGAAACCCACAAAGAAGA 3425224
>seq820
Length=4332
Score = 87.8 bits (96), Expect = 2e-12
Identities = 66/78 (85%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 157691 GGGGTGTAGCGCAGCTTGGTAGCGCGGTTGCTTTGGGAGCAATAGGTCGCAGGTTCGAAT 157750
||| |||||||||||||||||||||| ||| |||||| ||| | ||| | ||||| |||
Sbjct 3813 GGGATGTAGCGCAGCTTGGTAGCGCGTTTGTTTTGGGTACAAAATGTCACGGGTTCAAAT 3754
Query 157751 CCTGTCACCCCGACTTAT 157768
||||||| ||| ||||||
Sbjct 3753 CCTGTCATCCCTACTTAT 3736
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547737224154120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |