Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21] 1,457 sequences; 137,073,209 total letters Query= NC_020486.1 Length=171211 Score E Sequences producing significant alignments: (Bits) Value seq1 105 7e-18 seq820 87.8 2e-12 >seq1 Length=19836964 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 158325 GTGTGAAGACGACCAGTACATCCTTGACGCAGCTGAGGAAGCGGGTGTCGAACTCAATTA 158384 ||| ||||||||| ||| |||| ||||| || |||||||| ||| |||| | ||| Sbjct 3424997 GTGCGAAGACGACGTCTACGTCCTCGACGCTGCGGAGGAAGCCGGTATCGATTTGCCTTA 3425056 Query 158385 CTCGTGCCGTGCAGGCGCTTGTTCGTCGTGTGCGGGAAAACTCGTCTCTGGCACCGTAGA 158444 ||| |||||||| || |||| || || || || ||| |||||||||| || | || Sbjct 3425057 CTCTTGCCGTGCCGGATCTTGCTCTAGCTGCGCCGGTAAAGTCGTCTCTGGATCCATTGA 3425116 Query 158445 CCAAAGCGACCAGTCCTTCCTGGACGATGACCAAATCGATTCTGGTTTCATTCTGACTTG 158504 ||| |||||| |||| | ||||||||||| || || || | | || || || Sbjct 3425117 CCAGTCGGACCAGAGCTTCTTAGACGATGACCAGATGAATGACGGCTATGTCCTCACCTG 3425176 Query 158505 TGTTTCTTATCCTACAAGTGATTGTGTGATTGAGACTGACAAGGAAGA 158552 ||| |||| || || |||| || ||||| || |||| ||||| Sbjct 3425177 TGTGGCTTACCCGACTTCTGATGTCGTCATTGAAACCCACAAAGAAGA 3425224 >seq820 Length=4332 Score = 87.8 bits (96), Expect = 2e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 157691 GGGGTGTAGCGCAGCTTGGTAGCGCGGTTGCTTTGGGAGCAATAGGTCGCAGGTTCGAAT 157750 ||| |||||||||||||||||||||| ||| |||||| ||| | ||| | ||||| ||| Sbjct 3813 GGGATGTAGCGCAGCTTGGTAGCGCGTTTGTTTTGGGTACAAAATGTCACGGGTTCAAAT 3754 Query 157751 CCTGTCACCCCGACTTAT 157768 ||||||| ||| |||||| Sbjct 3753 CCTGTCATCCCTACTTAT 3736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547737224154120