Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21]
1,457 sequences; 137,073,209 total letters
Query= NC_020837.1
Length=198013
Score E
Sequences producing significant alignments: (Bits) Value
seq4 95.1 2e-14
seq5 93.3 5e-14
>seq4
Length=14320061
Score = 95.1 bits (104), Expect = 2e-14
Identities = 132/185 (71%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 102824 GGGTATGCCACGCAGGTCAGAACAAAACCTGCTTCTAGTTGATCGTCATCCAGAAAGGAT 102883
||||| ||||| || |||| ||| | ||| || | ||||| || || ||||| ||
Sbjct 14002981 GGGTAAGCCACACAAGTCAAGACATACCCTTTCTCCAAGTGATCTTCCTCAAGAAACGAA 14002922
Query 102884 TGATCTTCTTGATCTACAGTACCCGATTCAATCTTACCAGCACAAGTAGAACACGCACCA 102943
||| ||||| || ||| || ||||||||||| ||||| |||||||||||
Sbjct 14002921 CCATCAGACTGATCAACCTGACCTTTCTCGATCTTACCAGCGCAAGTGGAACACGCACCG 14002862
Query 102944 GCACGACAGGAATAAGGCAGATCAACACCTGCTTCATCAGCAGCGTCTAGAATATATTGA 103003
|| | || || ||||||| ||||| ||||| || ||||| || || | || |||||
Sbjct 14002861 GCTCTGCAAGAGTAAGGCAAGTCAACTCCTGCCTCTTCAGCTGCATCCAATATGTATTGG 14002802
Query 103004 TCATC 103008
|||||
Sbjct 14002801 TCATC 14002797
>seq5
Length=16150104
Score = 93.3 bits (102), Expect = 5e-14
Identities = 208/310 (67%), Gaps = 3/310 (1%)
Strand=Plus/Minus
Query 101876 CATAAGCACGAAGGTTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCACAGACCCA 101935
|||| ||||| ||||| | ||| ||| | || | || | | ||| | |||| | | |
Sbjct 10049602 CATAGGCACGTAGGTTAAAAGCTAGAAGACTACT-CCAAGAGCACTCATACACATATCAA 10049544
Query 101936 TAACAGGAACAAAGAGCATAAAGAAATGCAACCACCTCTTATTACTAAATGCAATACCAA 101995
| ||| | ||||| | |||||| |||| ||| || |||| ||| |||| ||||
Sbjct 10049543 TTACAAGTACAAATAACATAAATAAAT--AACTGACTTCTATTGGAAAACGCAACCCCAA 10049486
Query 101996 AGATTTGAGACCAGAAACGGTTTGCTGTAACCATTGAATAAGTCTCTTCCTCTTGTGTGG 102055
| ||||| || | || | |||||| || | |||||||||||| ||||| |||| | |
Sbjct 10049485 ATATTTGTGATAAAAAGCAGTTTGCGGTGAACATTGAATAAGTTTCTTCGACTTGATTTG 10049426
Query 102056 AATCGAATGCTTTGAAAGTGTTTGCTTGATCACCATCTTCATACAGAGTGTTCTCCACAG 102115
|| || || | || || ||||| || ||||| || ||| | | | | |||
Sbjct 10049425 TATTAAAAGCATCTAATGTATTTGCACCATTACCATTTTTATATAAAAGATATTTTACAA 10049366
Query 102116 TGACACCGTGGATTGCTGACAGCAGTGCTCCTCCCAGGATACCTGCAACACCCATCATAT 102175
| |||| || || | | || | || | ||||| ||||| || || | ||||||||
Sbjct 10049365 TAGCACCATGAATAGTGCATAGAAAAGCAGCGCCCAGTATACCGGCGACTCTCATCATAT 10049306
Query 102176 GGAATGGGTT 102185
||||||||
Sbjct 10049305 AAAATGGGTT 10049296
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633502062133560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |