Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21] 1,457 sequences; 137,073,209 total letters Query= NC_020837.1 Length=198013 Score E Sequences producing significant alignments: (Bits) Value seq4 95.1 2e-14 seq5 93.3 5e-14 >seq4 Length=14320061 Score = 95.1 bits (104), Expect = 2e-14 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 102824 GGGTATGCCACGCAGGTCAGAACAAAACCTGCTTCTAGTTGATCGTCATCCAGAAAGGAT 102883 ||||| ||||| || |||| ||| | ||| || | ||||| || || ||||| || Sbjct 14002981 GGGTAAGCCACACAAGTCAAGACATACCCTTTCTCCAAGTGATCTTCCTCAAGAAACGAA 14002922 Query 102884 TGATCTTCTTGATCTACAGTACCCGATTCAATCTTACCAGCACAAGTAGAACACGCACCA 102943 ||| ||||| || ||| || ||||||||||| ||||| ||||||||||| Sbjct 14002921 CCATCAGACTGATCAACCTGACCTTTCTCGATCTTACCAGCGCAAGTGGAACACGCACCG 14002862 Query 102944 GCACGACAGGAATAAGGCAGATCAACACCTGCTTCATCAGCAGCGTCTAGAATATATTGA 103003 || | || || ||||||| ||||| ||||| || ||||| || || | || ||||| Sbjct 14002861 GCTCTGCAAGAGTAAGGCAAGTCAACTCCTGCCTCTTCAGCTGCATCCAATATGTATTGG 14002802 Query 103004 TCATC 103008 ||||| Sbjct 14002801 TCATC 14002797 >seq5 Length=16150104 Score = 93.3 bits (102), Expect = 5e-14 Identities = 208/310 (67%), Gaps = 3/310 (1%) Strand=Plus/Minus Query 101876 CATAAGCACGAAGGTTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCACAGACCCA 101935 |||| ||||| ||||| | ||| ||| | || | || | | ||| | |||| | | | Sbjct 10049602 CATAGGCACGTAGGTTAAAAGCTAGAAGACTACT-CCAAGAGCACTCATACACATATCAA 10049544 Query 101936 TAACAGGAACAAAGAGCATAAAGAAATGCAACCACCTCTTATTACTAAATGCAATACCAA 101995 | ||| | ||||| | |||||| |||| ||| || |||| ||| |||| |||| Sbjct 10049543 TTACAAGTACAAATAACATAAATAAAT--AACTGACTTCTATTGGAAAACGCAACCCCAA 10049486 Query 101996 AGATTTGAGACCAGAAACGGTTTGCTGTAACCATTGAATAAGTCTCTTCCTCTTGTGTGG 102055 | ||||| || | || | |||||| || | |||||||||||| ||||| |||| | | Sbjct 10049485 ATATTTGTGATAAAAAGCAGTTTGCGGTGAACATTGAATAAGTTTCTTCGACTTGATTTG 10049426 Query 102056 AATCGAATGCTTTGAAAGTGTTTGCTTGATCACCATCTTCATACAGAGTGTTCTCCACAG 102115 || || || | || || ||||| || ||||| || ||| | | | | ||| Sbjct 10049425 TATTAAAAGCATCTAATGTATTTGCACCATTACCATTTTTATATAAAAGATATTTTACAA 10049366 Query 102116 TGACACCGTGGATTGCTGACAGCAGTGCTCCTCCCAGGATACCTGCAACACCCATCATAT 102175 | |||| || || | | || | || | ||||| ||||| || || | |||||||| Sbjct 10049365 TAGCACCATGAATAGTGCATAGAAAAGCAGCGCCCAGTATACCGGCGACTCTCATCATAT 10049306 Query 102176 GGAATGGGTT 102185 |||||||| Sbjct 10049305 AAAATGGGTT 10049296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633502062133560