Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21] 1,457 sequences; 137,073,209 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq7 138 1e-27 seq4 113 5e-20 >seq7 Length=17055980 Score = 138 bits (152), Expect = 1e-27 Identities = 161/213 (76%), Gaps = 16/213 (8%) Strand=Plus/Plus Query 139315 CTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTT 139374 |||| || || |||||||| || || |||||||| || ||||||||||| |||||||||| Sbjct 14440128 CTTGGGCAGTACAGATGTTGCTAGTGGCTTTGTCCCTCCTAATATGCTGTTCTCTAGTTT 14440187 Query 139375 GTAGTGCTAATCTGTATGCAG-GATTGCCTTCGCTG-----TCCACTGACTGA--CCTAC 139426 | | || | || |||| | |||| ||| ||| || || ||||| || | Sbjct 14440188 GCATCGCCA-----TACGCAGAGCTTGCTTTC-CTGAAGAGTCAAC--ACTGATACCAAT 14440239 Query 139427 AATTCTGCCAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGG 139486 ||| || || || ||| |||||||||||| | || || || ||||| ||||||||||| Sbjct 14440240 AATCCTCCCTGGCATCATTCTCTTATACTCTTGTGAAGTAGCCAAGAACGCAGCATGAGG 14440299 Query 139487 ACCTCCGTATCCCATAGGAATACCAAACCTTTG 139519 ||| ||||| ||||| |||| |||||||||||| Sbjct 14440300 ACCACCGTAACCCATTGGAACACCAAACCTTTG 14440332 Score = 91.5 bits (100), Expect = 2e-13 Identities = 88/111 (79%), Gaps = 4/111 (4%) Strand=Plus/Plus Query 138161 AAATGGTGTGAGATGTTTTGCT--ACACCAATAGGACCTACGCCAGGACCTCCACCTCCA 138218 |||||||| | ||||| ||| |||||||| ||||| | ||||| || ||||||||| Sbjct 14438302 AAATGGTGCTAAATGTT--GCTTCACACCAATGGGACCCATTCCAGGCCCACCACCTCCA 14438359 Query 138219 TGTGGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCA 138269 || ||||||||||| ||||| || | ||| ||||| || ||||| || ||| Sbjct 14438360 TGAGGAATACAGAAGGTCTTGTGGAGATTGAGATGGCACACATCCGCTCCA 14438410 Score = 86.0 bits (94), Expect = 7e-12 Identities = 118/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918 ||||||||| || ||||| || |||| || | || |||||||| | || || | || Sbjct 14440669 CATTGCCTCGGCAGCTGCGGTCCCTTCGTCGAGCAGCGATGCGTTAGACATGGGAAGCCC 14440728 Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978 || || || || || | ||| ||| |||||| | | || | | |||||||| || Sbjct 14440729 CGTGAGATCGGTTATCATCGTCTGGAAATTGAGCAGCGACTCGAGACGACCCTGAGAGAT 14440788 Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTC 140023 ||||||||| || |||||||| ||||||||| |||||||| Sbjct 14440789 CTCAGCTTGGTAAGGAGTGTATTGAGTGTACCAAGCCGGATTCTC 14440833 >seq4 Length=14320061 Score = 113 bits (124), Expect = 5e-20 Identities = 124/165 (75%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918 |||||| || || ||||| || ||||||| | | ||| ||||| | || |||| || Sbjct 2231895 CATTGCTTCCGCGGCTGCTGTACCTTCATCGAGCAAAGAAGCGTTCGACATAGGTAGACC 2231954 Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978 || || || ||||| | ||||||| |||||| | || || | |||||| || || || Sbjct 2231955 AGTGAGATCAGTGATTACCGTTTGGAAATTGAGAAGAGACTCGAGTCTTCCTTGTGAGAT 2232014 Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTC 140023 |||||||||||| |||||||| ||||||||| ||||||||| Sbjct 2232015 CTCAGCTTGATAAGGAGTGTATTGAGTGTACCAAGCAGGATTCTC 2232059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578987854991640