Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21]
1,457 sequences; 137,073,209 total letters
Query= NC_020859.1
Length=175430
Score E
Sequences producing significant alignments: (Bits) Value
seq5 98.7 1e-15
>seq5
Length=16150104
Score = 98.7 bits (108), Expect = 1e-15
Identities = 183/268 (68%), Gaps = 2/268 (1%)
Strand=Plus/Plus
Query 167525 TCCAAGGATTCCACAACTGGACACTGAATCCATTTCATATGATGGGTGTAGCAGGTATCC 167584
|||||| || | || |||| | |||| |||||| |||||||| | || || ||||| |
Sbjct 10049270 TCCAAGTGTTTTAAAATTGGATATTGAACCCATTTTATATGATGAGAGTCGCCGGTATAC 10049329
Query 167585 TGGGTGGTGCATTGCTTTCTGCAATCCATGGTGTTACAGTAGAGAATACTTTGTATGAAG 167644
|||| | ||| || || | | || ||||||| || ||| | || ||| ||| ||
Sbjct 10049330 TGGGCGCTGCTTTTCTATGCACTATTCATGGTGCTATTGTAAAATATCTTTTATATAAAA 10049389
Query 167645 ATGGTGAGCAAGCAAACACTTTTAAGGCATTCGATTCTACTCAGGAAGAAGAGACTTATT 167704
||||| | ||||| || || | || || || | | ||| | ||||| |||||||
Sbjct 10049390 ATGGTAATGGTGCAAATACATTAGATGCTTTTAATACAAATCAAGTCGAAGAAACTTATT 10049449
Query 167705 CAATGGTTACAGCAAACCGATTCTGGTCTCAGATCTTCGGCATTGCTTTCAGCAACAAAC 167764
||||| | || |||||| | || | || || || || || |||| || ||| | |
Sbjct 10049450 CAATGTTCACCGCAAACTGCTTTTTATCACAAATATTTGGGGTTGCGTTTTCCAATAGAA 10049509
Query 167765 GCTGGCTTCATTTCTTTATGTTATTCGT 167792
| | | |||| ||||||||||| ||
Sbjct 10049510 GTCAG--TTATTTATTTATGTTATTTGT 10049535
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 561237778270800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |