Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21] 1,457 sequences; 137,073,209 total letters Query= NC_020859.1 Length=175430 Score E Sequences producing significant alignments: (Bits) Value seq5 98.7 1e-15 >seq5 Length=16150104 Score = 98.7 bits (108), Expect = 1e-15 Identities = 183/268 (68%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 167525 TCCAAGGATTCCACAACTGGACACTGAATCCATTTCATATGATGGGTGTAGCAGGTATCC 167584 |||||| || | || |||| | |||| |||||| |||||||| | || || ||||| | Sbjct 10049270 TCCAAGTGTTTTAAAATTGGATATTGAACCCATTTTATATGATGAGAGTCGCCGGTATAC 10049329 Query 167585 TGGGTGGTGCATTGCTTTCTGCAATCCATGGTGTTACAGTAGAGAATACTTTGTATGAAG 167644 |||| | ||| || || | | || ||||||| || ||| | || ||| ||| || Sbjct 10049330 TGGGCGCTGCTTTTCTATGCACTATTCATGGTGCTATTGTAAAATATCTTTTATATAAAA 10049389 Query 167645 ATGGTGAGCAAGCAAACACTTTTAAGGCATTCGATTCTACTCAGGAAGAAGAGACTTATT 167704 ||||| | ||||| || || | || || || | | ||| | ||||| ||||||| Sbjct 10049390 ATGGTAATGGTGCAAATACATTAGATGCTTTTAATACAAATCAAGTCGAAGAAACTTATT 10049449 Query 167705 CAATGGTTACAGCAAACCGATTCTGGTCTCAGATCTTCGGCATTGCTTTCAGCAACAAAC 167764 ||||| | || |||||| | || | || || || || || |||| || ||| | | Sbjct 10049450 CAATGTTCACCGCAAACTGCTTTTTATCACAAATATTTGGGGTTGCGTTTTCCAATAGAA 10049509 Query 167765 GCTGGCTTCATTTCTTTATGTTATTCGT 167792 | | | |||| ||||||||||| || Sbjct 10049510 GTCAG--TTATTTATTTATGTTATTTGT 10049535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561237778270800