Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21] 1,457 sequences; 137,073,209 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq3 89.7 8e-13 >seq3 Length=15215380 Score = 89.7 bits (98), Expect = 8e-13 Identities = 143/204 (70%), Gaps = 1/204 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || ||||| || || || || || | || || ||| ||| Sbjct 11243713 ATGCAGATCTTTGTCAAGACTTTGACGGGTAAGACCATCACTCTTGAGGTTGAAAGCTCT 11243772 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || ||||| || || ||||||||||||||||| | || || || Sbjct 11243773 GATATGATTGATAATGTGAAGGCCAAGATTCAAGATAAAGAAGGCATCCAACCGGACCAG 11243832 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT-ACCAGAACTTTATCAGATTATAA 156001 || || | || | |||||| || |||||||||||| | |||||| | |||||||| Sbjct 11243833 CAGAGGCTAATCTTTGCCGGGAATCAGCTCGAAGATGGTCGCGACTTTAGCGGATTATAA 11243892 Query 156002 TATATCCAAAGAGGCGACGCTTCA 156025 || |||||| | || ||||| Sbjct 11243893 CATTCAGAAAGAGTCTACTCTTCA 11243916 Score = 84.2 bits (92), Expect = 3e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||||||| | |||||| | ||||| ||||| ||||| | ||||| || ||| Sbjct 11243485 ATGCAAATATTTGTGAAAACACTCACTGGCAAAACCATTACCCTCGAAGTTGAGAGTTCA 11243544 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | | || || || || | || || ||||| || ||||| || | || || ||| Sbjct 11243545 GACACTGTTGATAATGTAAAGACAAAGATTCAAGACAAGGAAGGGATCGCGCCGGACCAA 11243604 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 | ||||| || | || ||||| |||||||| ||| Sbjct 11243605 TAGAGATTCATCTTCGCTGGTAAACAGCTCGAGGAT 11243640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731858670781200