Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21]
1,457 sequences; 137,073,209 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq3 89.7 8e-13
>seq3
Length=15215380
Score = 89.7 bits (98), Expect = 8e-13
Identities = 143/204 (70%), Gaps = 1/204 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || ||| | || || ||||| || || || || || | || || ||| |||
Sbjct 11243713 ATGCAGATCTTTGTCAAGACTTTGACGGGTAAGACCATCACTCTTGAGGTTGAAAGCTCT 11243772
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| ||| || ||||| || || ||||||||||||||||| | || || ||
Sbjct 11243773 GATATGATTGATAATGTGAAGGCCAAGATTCAAGATAAAGAAGGCATCCAACCGGACCAG 11243832
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT-ACCAGAACTTTATCAGATTATAA 156001
|| || | || | |||||| || |||||||||||| | |||||| | ||||||||
Sbjct 11243833 CAGAGGCTAATCTTTGCCGGGAATCAGCTCGAAGATGGTCGCGACTTTAGCGGATTATAA 11243892
Query 156002 TATATCCAAAGAGGCGACGCTTCA 156025
|| |||||| | || |||||
Sbjct 11243893 CATTCAGAAAGAGTCTACTCTTCA 11243916
Score = 84.2 bits (92), Expect = 3e-11
Identities = 112/156 (72%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||||||| | |||||| | ||||| ||||| ||||| | ||||| || |||
Sbjct 11243485 ATGCAAATATTTGTGAAAACACTCACTGGCAAAACCATTACCCTCGAAGTTGAGAGTTCA 11243544
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | | || || || || | || || ||||| || ||||| || | || || |||
Sbjct 11243545 GACACTGTTGATAATGTAAAGACAAAGATTCAAGACAAGGAAGGGATCGCGCCGGACCAA 11243604
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978
| ||||| || | || ||||| |||||||| |||
Sbjct 11243605 TAGAGATTCATCTTCGCTGGTAAACAGCTCGAGGAT 11243640
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731858670781200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |