Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21] 1,457 sequences; 137,073,209 total letters Query= NC_021536.1 Length=171797 Score E Sequences producing significant alignments: (Bits) Value seq113 98.7 1e-15 seq4 98.7 1e-15 seq2 98.7 1e-15 >seq113 Length=54118 Score = 98.7 bits (108), Expect = 1e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 152004 TACATCTTGGATGCTGCTGAGGAACAAGGAGTTGATATGAACTACTCTTGTCGTGCTGGT 152063 ||| || | || || || |||||| ||| | ||| || |||||||| ||||||||| Sbjct 24709 TACGTCCTCGACGCGGCGGAGGAAGCAGGGATCGATTTGCCTTACTCTTGCCGTGCTGGT 24650 Query 152064 GCATGTTCCTCTTGTGCTGGTAAGATTGTGAGTGGTACAGTTGATCAGAGTGACCAATCA 152123 | || || ||||| ||||| |||| ||| | ||||| ||| |||||| Sbjct 24649 TCTTGCTCGAGCTGTGCCGGTAAAGTTGTAGCTGGATCTGTTGACCAGTCTGACCAGAGT 24590 Query 152124 TTCTTGGATGATGACCAGATTGAATCAGGATTCGTGCTGACCTGTGTTGCATATCCAACT 152183 ||| | |||||||||||||||| ||| || || || || |||| || ||||| ||| Sbjct 24589 TTCCTTGATGATGACCAGATTGGTGAAGGGTTTGTTCTCACTTGTGCGGCTTATCCTACT 24530 Query 152184 TCTGATGTCACC 152195 |||||||| ||| Sbjct 24529 TCTGATGTTACC 24518 >seq4 Length=14320061 Score = 98.7 bits (108), Expect = 1e-15 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 151993 AAGATGACCAGTACATCTTGGATGCTGCTGAGGAACAAGGAGTTGATATGAACTACTCTT 152052 |||||||||| ||||| |||||||| ||||| || ||||||||| || ||||||| Sbjct 14002795 AAGATGACCAATACATATTGGATGCAGCTGAAGAGGCAGGAGTTGACTTGCCTTACTCTT 14002854 Query 152053 GTCGTGCTGGTGCATGTTCCTCTTGTGCTGGTAAGATTGTGAGTGGTACAGTTGATCAG 152111 | | || ||||| |||||| |||| ||||||||||| | || ||| ||||||||| Sbjct 14002855 GCAGAGCCGGTGCGTGTTCCACTTGCGCTGGTAAGATCGAGAAAGGTCAGGTTGATCAG 14002913 >seq2 Length=13294645 Score = 98.7 bits (108), Expect = 1e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 152004 TACATCTTGGATGCTGCTGAGGAACAAGGAGTTGATATGAACTACTCTTGTCGTGCTGGT 152063 ||| || | || || || |||||| ||| | ||| || |||||||| ||||||||| Sbjct 3079479 TACGTCCTCGACGCGGCGGAGGAAGCAGGGATCGATTTGCCTTACTCTTGCCGTGCTGGT 3079538 Query 152064 GCATGTTCCTCTTGTGCTGGTAAGATTGTGAGTGGTACAGTTGATCAGAGTGACCAATCA 152123 | || || ||||| ||||| |||| ||| | ||||| ||| |||||| Sbjct 3079539 TCTTGCTCGAGCTGTGCCGGTAAAGTTGTAGCTGGATCTGTTGACCAGTCTGACCAGAGT 3079598 Query 152124 TTCTTGGATGATGACCAGATTGAATCAGGATTCGTGCTGACCTGTGTTGCATATCCAACT 152183 ||| | |||||||||||||||| ||| || || || || |||| || ||||| ||| Sbjct 3079599 TTCCTTGATGATGACCAGATTGGTGAAGGGTTTGTTCTCACTTGTGCGGCTTATCCTACT 3079658 Query 152184 TCTGATGTCACC 152195 |||||||| ||| Sbjct 3079659 TCTGATGTTACC 3079670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 549612390002040