Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21]
1,457 sequences; 137,073,209 total letters
Query= NC_023587.1
Length=189311
Score E
Sequences producing significant alignments: (Bits) Value
seq113 136 5e-27
seq2 136 5e-27
>seq113
Length=54118
Score = 136 bits (150), Expect = 5e-27
Identities = 159/215 (74%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 138538 TACATCCTTGATGCTGCTGATGAAGCAGGTATTGATCTTCCCTACTCCTGTCGTGCTGGT 138597
||| |||| || || || || |||||||| || ||| | || ||||| || |||||||||
Sbjct 24709 TACGTCCTCGACGCGGCGGAGGAAGCAGGGATCGATTTGCCTTACTCTTGCCGTGCTGGT 24650
Query 138598 GCATGTTCTACCTGTGCTGGTAAATTAGTTGAAGGAACTGTAGATCAGTCTGACCAGTCT 138657
| || || | |||||| |||||| | || | ||| |||| || |||||||||||| |
Sbjct 24649 TCTTGCTCGAGCTGTGCCGGTAAAGTTGTAGCTGGATCTGTTGACCAGTCTGACCAGAGT 24590
Query 138658 TTCCTTGATGATGACCAAATTGCAGCAGGATTTATCATGACTTGCGTAGCATACCCCACA 138717
||||||||||||||||| |||| | ||| ||| | | ||||| | || || || ||
Sbjct 24589 TTCCTTGATGATGACCAGATTGGTGAAGGGTTTGTTCTCACTTGTGCGGCTTATCCTACT 24530
Query 138718 TCCGATTGTATAATTGAAACTGAAAAAGAGGACGA 138752
|| ||| || ||||| || | ||||| || ||
Sbjct 24529 TCTGATGTTACCATTGAGACCCACAAAGAAGAAGA 24495
>seq2
Length=13294645
Score = 136 bits (150), Expect = 5e-27
Identities = 159/215 (74%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 138538 TACATCCTTGATGCTGCTGATGAAGCAGGTATTGATCTTCCCTACTCCTGTCGTGCTGGT 138597
||| |||| || || || || |||||||| || ||| | || ||||| || |||||||||
Sbjct 3079479 TACGTCCTCGACGCGGCGGAGGAAGCAGGGATCGATTTGCCTTACTCTTGCCGTGCTGGT 3079538
Query 138598 GCATGTTCTACCTGTGCTGGTAAATTAGTTGAAGGAACTGTAGATCAGTCTGACCAGTCT 138657
| || || | |||||| |||||| | || | ||| |||| || |||||||||||| |
Sbjct 3079539 TCTTGCTCGAGCTGTGCCGGTAAAGTTGTAGCTGGATCTGTTGACCAGTCTGACCAGAGT 3079598
Query 138658 TTCCTTGATGATGACCAAATTGCAGCAGGATTTATCATGACTTGCGTAGCATACCCCACA 138717
||||||||||||||||| |||| | ||| ||| | | ||||| | || || || ||
Sbjct 3079599 TTCCTTGATGATGACCAGATTGGTGAAGGGTTTGTTCTCACTTGTGCGGCTTATCCTACT 3079658
Query 138718 TCCGATTGTATAATTGAAACTGAAAAAGAGGACGA 138752
|| ||| || ||||| || | ||||| || ||
Sbjct 3079659 TCTGATGTTACCATTGAGACCCACAAAGAAGAAGA 3079693
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 605656169286120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |