Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21] 1,457 sequences; 137,073,209 total letters Query= NC_023587.1 Length=189311 Score E Sequences producing significant alignments: (Bits) Value seq113 136 5e-27 seq2 136 5e-27 >seq113 Length=54118 Score = 136 bits (150), Expect = 5e-27 Identities = 159/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 138538 TACATCCTTGATGCTGCTGATGAAGCAGGTATTGATCTTCCCTACTCCTGTCGTGCTGGT 138597 ||| |||| || || || || |||||||| || ||| | || ||||| || ||||||||| Sbjct 24709 TACGTCCTCGACGCGGCGGAGGAAGCAGGGATCGATTTGCCTTACTCTTGCCGTGCTGGT 24650 Query 138598 GCATGTTCTACCTGTGCTGGTAAATTAGTTGAAGGAACTGTAGATCAGTCTGACCAGTCT 138657 | || || | |||||| |||||| | || | ||| |||| || |||||||||||| | Sbjct 24649 TCTTGCTCGAGCTGTGCCGGTAAAGTTGTAGCTGGATCTGTTGACCAGTCTGACCAGAGT 24590 Query 138658 TTCCTTGATGATGACCAAATTGCAGCAGGATTTATCATGACTTGCGTAGCATACCCCACA 138717 ||||||||||||||||| |||| | ||| ||| | | ||||| | || || || || Sbjct 24589 TTCCTTGATGATGACCAGATTGGTGAAGGGTTTGTTCTCACTTGTGCGGCTTATCCTACT 24530 Query 138718 TCCGATTGTATAATTGAAACTGAAAAAGAGGACGA 138752 || ||| || ||||| || | ||||| || || Sbjct 24529 TCTGATGTTACCATTGAGACCCACAAAGAAGAAGA 24495 >seq2 Length=13294645 Score = 136 bits (150), Expect = 5e-27 Identities = 159/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 138538 TACATCCTTGATGCTGCTGATGAAGCAGGTATTGATCTTCCCTACTCCTGTCGTGCTGGT 138597 ||| |||| || || || || |||||||| || ||| | || ||||| || ||||||||| Sbjct 3079479 TACGTCCTCGACGCGGCGGAGGAAGCAGGGATCGATTTGCCTTACTCTTGCCGTGCTGGT 3079538 Query 138598 GCATGTTCTACCTGTGCTGGTAAATTAGTTGAAGGAACTGTAGATCAGTCTGACCAGTCT 138657 | || || | |||||| |||||| | || | ||| |||| || |||||||||||| | Sbjct 3079539 TCTTGCTCGAGCTGTGCCGGTAAAGTTGTAGCTGGATCTGTTGACCAGTCTGACCAGAGT 3079598 Query 138658 TTCCTTGATGATGACCAAATTGCAGCAGGATTTATCATGACTTGCGTAGCATACCCCACA 138717 ||||||||||||||||| |||| | ||| ||| | | ||||| | || || || || Sbjct 3079599 TTCCTTGATGATGACCAGATTGGTGAAGGGTTTGTTCTCACTTGTGCGGCTTATCCTACT 3079658 Query 138718 TCCGATTGTATAATTGAAACTGAAAAAGAGGACGA 138752 || ||| || ||||| || | ||||| || || Sbjct 3079659 TCTGATGTTACCATTGAGACCCACAAAGAAGAAGA 3079693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 605656169286120