Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21]
1,457 sequences; 137,073,209 total letters
Query= NC_026926.1
Length=192108
Score E
Sequences producing significant alignments: (Bits) Value
seq5 102 1e-16
>seq5
Length=16150104
Score = 102 bits (112), Expect = 1e-16
Identities = 220/327 (67%), Gaps = 3/327 (1%)
Strand=Plus/Plus
Query 182886 AACTGGACACTCAACCCCTTCCATATGATGGGAGTTGCTGGTATACTGGGTGGAGCACTG 182945
|| |||| | | ||||| || |||||||| |||| || ||||||||||| | || |
Sbjct 10049284 AATTGGATATTGAACCCATTTTATATGATGAGAGTCGCCGGTATACTGGGCGCTGCTTTT 10049343
Query 182946 CTCAGTGCTATCCATGGTGTCACAGTAGAGAATACCTTGTATGAAGATGGAGAACAGGCA 183005
|| | |||| ||||||| | ||| | || || ||| || |||| | |||
Sbjct 10049344 CTATGCACTATTCATGGTGCTATTGTAAAATATCTTTTATATAAAAATGGTAATGGTGCA 10049403
Query 183006 AACACATTTAAAGCGTTCGATTCCACTCAGGAGGAGGAGACCTATTCGATGGTTACAGCG 183065
|| ||||| | || || || | | ||| | || || || ||||| ||| | || ||
Sbjct 10049404 AATACATTAGATGCTTTTAATACAAATCAAGTCGAAGAAACTTATTCAATGTTCACCGCA 10049463
Query 183066 AATCGTTTTTGGTCACAAATCTTCGGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTC 183125
|| | |||| |||||||| || |||||||||||| ||||| || ||| | ||
Sbjct 10049464 AACTGCTTTTTATCACAAATATTTGGGGTTGCGTTTTCCAATAGAAGTCAGTT--ATTTA 10049521
Query 183126 TTTATGTTGTTTGTTCCTGTCATGGGTCTTTGGGTCTCTTCTATTGGGATCATTGGGCTT 183185
|||||||| ||||| | ||| || | | | || | | || || ||| | | ||
Sbjct 10049522 TTTATGTTATTTGTACTTGTAATTGATATGTGTATGAGTGCTCTT-GGAGTAGTCTTCTA 10049580
Query 183186 GCTCTTAATCTTCGTGCTTATGATTTT 183212
||| |||| || ||||| |||| ||||
Sbjct 10049581 GCTTTTAACCTACGTGCCTATGGTTTT 10049607
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 614606406276960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |