Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21] 1,457 sequences; 137,073,209 total letters Query= NC_026928.1 Length=189418 Score E Sequences producing significant alignments: (Bits) Value seq113 104 3e-17 seq2 104 3e-17 >seq113 Length=54118 Score = 104 bits (114), Expect = 3e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 176350 TCCTTGACGCTGCTGAAGAAGCAGGTGTAGATATCAATTACTCTTGTCGTGCTGGTGCTT 176409 |||| ||||| || || |||||||| | ||| | ||||||||| ||||||||| ||| Sbjct 24705 TCCTCGACGCGGCGGAGGAAGCAGGGATCGATTTGCCTTACTCTTGCCGTGCTGGTTCTT 24646 Query 176410 GTTCATCTTGTGCTGGCAAACTAGAGAGTGGTTCTGTTGATCAGAGTGATCAGTCTTTCC 176469 | || ||||| || ||| | | ||| |||||||| ||| ||| ||| ||||| Sbjct 24645 GCTCGAGCTGTGCCGGTAAAGTTGTAGCTGGATCTGTTGACCAGTCTGACCAGAGTTTCC 24586 Query 176470 TGGATGATGATCAAATTGAATCTGGTTTTATTCTGACTTGCGTATCTTATCCTACTAGTG 176529 | |||||||| || |||| || ||| |||| ||||| | ||||||||||| || Sbjct 24585 TTGATGATGACCAGATTGGTGAAGGGTTTGTTCTCACTTGTGCGGCTTATCCTACTTCTG 24526 Query 176530 AT 176531 || Sbjct 24525 AT 24524 >seq2 Length=13294645 Score = 104 bits (114), Expect = 3e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 176350 TCCTTGACGCTGCTGAAGAAGCAGGTGTAGATATCAATTACTCTTGTCGTGCTGGTGCTT 176409 |||| ||||| || || |||||||| | ||| | ||||||||| ||||||||| ||| Sbjct 3079483 TCCTCGACGCGGCGGAGGAAGCAGGGATCGATTTGCCTTACTCTTGCCGTGCTGGTTCTT 3079542 Query 176410 GTTCATCTTGTGCTGGCAAACTAGAGAGTGGTTCTGTTGATCAGAGTGATCAGTCTTTCC 176469 | || ||||| || ||| | | ||| |||||||| ||| ||| ||| ||||| Sbjct 3079543 GCTCGAGCTGTGCCGGTAAAGTTGTAGCTGGATCTGTTGACCAGTCTGACCAGAGTTTCC 3079602 Query 176470 TGGATGATGATCAAATTGAATCTGGTTTTATTCTGACTTGCGTATCTTATCCTACTAGTG 176529 | |||||||| || |||| || ||| |||| ||||| | ||||||||||| || Sbjct 3079603 TTGATGATGACCAGATTGGTGAAGGGTTTGTTCTCACTTGTGCGGCTTATCCTACTTCTG 3079662 Query 176530 AT 176531 || Sbjct 3079663 AT 3079664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 605998563050160