Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21] 1,457 sequences; 137,073,209 total letters Query= NC_027130.1 Length=172688 Score E Sequences producing significant alignments: (Bits) Value seq113 89.7 6e-13 seq2 89.7 6e-13 >seq113 Length=54118 Score = 89.7 bits (98), Expect = 6e-13 Identities = 133/186 (72%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 159555 GACGCTGCTGAGGAAGCAGGTGTAGATGCTCCGTATTCATGTCGTGCTGGTGCTTGTAGC 159614 ||||| || ||||||||||| | ||| || || || || ||||||||| |||| Sbjct 24700 GACGCGGCGGAGGAAGCAGGGATCGATTTGCCTTACTCTTGCCGTGCTGGTTCTTGCTCG 24641 Query 159615 ACATGTGCTGGTAAGATTGAGAGCGGGA-CAGTTGACCAAAGTGACCAATCTTTCTTGGA 159673 | ||||| ||||| ||| ||| ||| | |||||||| |||||| |||| | || Sbjct 24640 AGCTGTGCCGGTAAAGTTGT-AGCTGGATCTGTTGACCAGTCTGACCAGAGTTTCCTTGA 24582 Query 159674 CGATGATCAACTCGCTGAAGGATTTCTTCTCACTTGTGTCTCCTACCCTACATCAGACGT 159733 ||||| || | | |||||| ||| |||||||||||| | || ||||| || || || Sbjct 24581 TGATGACCAGATTGGTGAAGGGTTTGTTCTCACTTGTGCGGCTTATCCTACTTCTGATGT 24522 Query 159734 AACTAT 159739 || || Sbjct 24521 TACCAT 24516 >seq2 Length=13294645 Score = 89.7 bits (98), Expect = 6e-13 Identities = 133/186 (72%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 159555 GACGCTGCTGAGGAAGCAGGTGTAGATGCTCCGTATTCATGTCGTGCTGGTGCTTGTAGC 159614 ||||| || ||||||||||| | ||| || || || || ||||||||| |||| Sbjct 3079488 GACGCGGCGGAGGAAGCAGGGATCGATTTGCCTTACTCTTGCCGTGCTGGTTCTTGCTCG 3079547 Query 159615 ACATGTGCTGGTAAGATTGAGAGCGGGA-CAGTTGACCAAAGTGACCAATCTTTCTTGGA 159673 | ||||| ||||| ||| ||| ||| | |||||||| |||||| |||| | || Sbjct 3079548 AGCTGTGCCGGTAAAGTTG-TAGCTGGATCTGTTGACCAGTCTGACCAGAGTTTCCTTGA 3079606 Query 159674 CGATGATCAACTCGCTGAAGGATTTCTTCTCACTTGTGTCTCCTACCCTACATCAGACGT 159733 ||||| || | | |||||| ||| |||||||||||| | || ||||| || || || Sbjct 3079607 TGATGACCAGATTGGTGAAGGGTTTGTTCTCACTTGTGCGGCTTATCCTACTTCTGATGT 3079666 Query 159734 AACTAT 159739 || || Sbjct 3079667 TACCAT 3079672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552463538074560