Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21]
1,457 sequences; 137,073,209 total letters
Query= NC_027130.1
Length=172688
Score E
Sequences producing significant alignments: (Bits) Value
seq113 89.7 6e-13
seq2 89.7 6e-13
>seq113
Length=54118
Score = 89.7 bits (98), Expect = 6e-13
Identities = 133/186 (72%), Gaps = 2/186 (1%)
Strand=Plus/Minus
Query 159555 GACGCTGCTGAGGAAGCAGGTGTAGATGCTCCGTATTCATGTCGTGCTGGTGCTTGTAGC 159614
||||| || ||||||||||| | ||| || || || || ||||||||| ||||
Sbjct 24700 GACGCGGCGGAGGAAGCAGGGATCGATTTGCCTTACTCTTGCCGTGCTGGTTCTTGCTCG 24641
Query 159615 ACATGTGCTGGTAAGATTGAGAGCGGGA-CAGTTGACCAAAGTGACCAATCTTTCTTGGA 159673
| ||||| ||||| ||| ||| ||| | |||||||| |||||| |||| | ||
Sbjct 24640 AGCTGTGCCGGTAAAGTTGT-AGCTGGATCTGTTGACCAGTCTGACCAGAGTTTCCTTGA 24582
Query 159674 CGATGATCAACTCGCTGAAGGATTTCTTCTCACTTGTGTCTCCTACCCTACATCAGACGT 159733
||||| || | | |||||| ||| |||||||||||| | || ||||| || || ||
Sbjct 24581 TGATGACCAGATTGGTGAAGGGTTTGTTCTCACTTGTGCGGCTTATCCTACTTCTGATGT 24522
Query 159734 AACTAT 159739
|| ||
Sbjct 24521 TACCAT 24516
>seq2
Length=13294645
Score = 89.7 bits (98), Expect = 6e-13
Identities = 133/186 (72%), Gaps = 2/186 (1%)
Strand=Plus/Plus
Query 159555 GACGCTGCTGAGGAAGCAGGTGTAGATGCTCCGTATTCATGTCGTGCTGGTGCTTGTAGC 159614
||||| || ||||||||||| | ||| || || || || ||||||||| ||||
Sbjct 3079488 GACGCGGCGGAGGAAGCAGGGATCGATTTGCCTTACTCTTGCCGTGCTGGTTCTTGCTCG 3079547
Query 159615 ACATGTGCTGGTAAGATTGAGAGCGGGA-CAGTTGACCAAAGTGACCAATCTTTCTTGGA 159673
| ||||| ||||| ||| ||| ||| | |||||||| |||||| |||| | ||
Sbjct 3079548 AGCTGTGCCGGTAAAGTTG-TAGCTGGATCTGTTGACCAGTCTGACCAGAGTTTCCTTGA 3079606
Query 159674 CGATGATCAACTCGCTGAAGGATTTCTTCTCACTTGTGTCTCCTACCCTACATCAGACGT 159733
||||| || | | |||||| ||| |||||||||||| | || ||||| || || ||
Sbjct 3079607 TGATGACCAGATTGGTGAAGGGTTTGTTCTCACTTGTGCGGCTTATCCTACTTCTGATGT 3079666
Query 159734 AACTAT 159739
|| ||
Sbjct 3079667 TACCAT 3079672
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 552463538074560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |