Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21]
1,457 sequences; 137,073,209 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq2 111 2e-19
>seq2
Length=13294645
Score = 111 bits (122), Expect = 2e-19
Identities = 503/776 (65%), Gaps = 30/776 (4%)
Strand=Plus/Plus
Query 59658 GATTGGGACAAGCTCAATTACGACGAGCAGCATTTCATCAAGATGGTCCTGGCCTTCTTC 59717
|| ||||| || || || ||| ||| | || |||||||| || || |||||||||
Sbjct 9186254 GACTGGGAGAATCTAAACGACGGCGAACGACACTTCATCAAACACGTACTCGCCTTCTTC 9186313
Query 59718 GCGGCGAGTGATGGAATTGTGATGGAAAATATAGA--CATGAACTTT-TCCAAGGATGTC 59774
|| || || ||||| || |||| ||| | | | || | | ||| |||||
Sbjct 9186314 GCCGCCTCAGACGGAATCGTTCTGGAGAATCTCGCTTCCCGATTTATGTCC---GATGTG 9186370
Query 59775 CAGATTGCCGAGGCCCGGTCGTTCTACGCGTATCAG-TCGTTCAACGAGTCTATCCACTC 59833
|| | | ||||| || | ||||||| | ||| ||| | ||| || |||||
Sbjct 9186371 CAAGTCTCGGAGGCGCGTGCTTTCTACGGTTTCCAGATCGCG-ATTGAGAACATACACTC 9186429
Query 59834 CGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGGCTGGTCT 59893
||||| |||| ||| | |||| | | ||||||| |||||| | |||
Sbjct 9186430 CGAGATGTACAGTCTCCTCCTCGACACTTACATCAAGGACAACAAAGAGAGAGACCATCT 9186489
Query 59894 GTTCCGTGCCATAGAGACG-TCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCATGCAGT 59952
||||| || || || || |||| || || | ||||| | ||||| ||| |||
Sbjct 9186490 CTTCCGCGCGATCGAAACCATCCCTTGC-GTCGCCAAGAAAGCCCAGTGGGCGATGAAGT 9186548
Query 59953 GGAT-GAGTCCTGGAGCATCA----TTTGCACAACGTCTCATAGCTTTTGCATGCGTGGA 60007
|||| || |||| | ||| ||||| | | || | ||||| || || || ||
Sbjct 9186549 GGATCGA----TGGATC-TCAGACTTTTGCCGAGAGAATCGTCGCTTTCGCCTGTGTCGA 9186603
Query 60008 AGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCAT 60067
||| ||||||||||| || ||||| | ||||||||||| |||||||| || |||||
Sbjct 9186604 AGGTATCTTCTTCTCCGGTAGCTTCTGCTCGATTTTCTGGCTGAAAAAGCGAGGTCTCAT 9186663
Query 60068 GCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCATCAGGAGTT 60127
||| || | | |||||||||||| |||| || || ||||| ||| | ||| || ||
Sbjct 9186664 GCCCGGATTAACCTTCTCCAACGAGTTGATCTCACGAGACGAAGGCTTACATTGCGATTT 9186723
Query 60128 TGCAGTGAC-GCTCTATTCACAC-CTATTGGAAAAATGCCCTTCCAAGGATATTCACAAG 60185
|| ||| | | |||| ||| | || |||| || || | ||| |||| |||
Sbjct 9186724 CGC-GTGCCTGATCTA--CACGCTCTTGTGGACGAA-GCTC-TCCGAGGAGCGCGTGAAG 9186778
Query 60186 --ATTGTTCAGTG-GGCTTGTGAAGTGGAGAGCGAGTTCATCACAGAAGCGCTTCCATGC 60242
| | || | | || || | ||||| ||||| | || ||||| || |||
Sbjct 9186779 TCAATCGTCTGCGACGCCGTCGAGATCGAGAGGGAGTTTGTGTGCGACGCGCTGCCGTGC 9186838
Query 60243 AAACTCATAGGTATGGACGCTGGAGAAATGACGCAGTACATTCAGTTTGTCGCGGACCGC 60302
| |||| ||| || || |||| ||||||||| ||||||| || || |
Sbjct 9186839 GCGTTGGTAGGGATGAACAGTGACCTGATGAGTCAGTACATTGAGTTTGTGGCAGATAGG 9186898
Query 60303 CTCATGGCCCAGTTTGGAGAAGGACCAATTTACGGCGTGAATAACCCTTTCGACTGGATG 60362
|| ||| | | || | || | ||||| ||| ||| || || || ||||||
Sbjct 9186899 CTTTTGGGGGCGCTCGGGTACGGTAAGGTGTACGGTGTGGCTAATCCGTTTGATTGGATG 9186958
Query 60363 GAGACCATCTCGTTGGAAGGGAAGACCAACTTCTTTGAGAAGCGGGTCGGGGATTA 60418
||| |||||| | | ||||| || |||||||| |||||| | || || |||||
Sbjct 9186959 GAGTTAATCTCGCTTCAGGGGAAAACAAACTTCTTCGAGAAGAGAGTTGGCGATTA 9187014
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548514809992080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |