Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21] 1,457 sequences; 137,073,209 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq2 111 2e-19 >seq2 Length=13294645 Score = 111 bits (122), Expect = 2e-19 Identities = 503/776 (65%), Gaps = 30/776 (4%) Strand=Plus/Plus Query 59658 GATTGGGACAAGCTCAATTACGACGAGCAGCATTTCATCAAGATGGTCCTGGCCTTCTTC 59717 || ||||| || || || ||| ||| | || |||||||| || || ||||||||| Sbjct 9186254 GACTGGGAGAATCTAAACGACGGCGAACGACACTTCATCAAACACGTACTCGCCTTCTTC 9186313 Query 59718 GCGGCGAGTGATGGAATTGTGATGGAAAATATAGA--CATGAACTTT-TCCAAGGATGTC 59774 || || || ||||| || |||| ||| | | | || | | ||| ||||| Sbjct 9186314 GCCGCCTCAGACGGAATCGTTCTGGAGAATCTCGCTTCCCGATTTATGTCC---GATGTG 9186370 Query 59775 CAGATTGCCGAGGCCCGGTCGTTCTACGCGTATCAG-TCGTTCAACGAGTCTATCCACTC 59833 || | | ||||| || | ||||||| | ||| ||| | ||| || ||||| Sbjct 9186371 CAAGTCTCGGAGGCGCGTGCTTTCTACGGTTTCCAGATCGCG-ATTGAGAACATACACTC 9186429 Query 59834 CGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGGCTGGTCT 59893 ||||| |||| ||| | |||| | | ||||||| |||||| | ||| Sbjct 9186430 CGAGATGTACAGTCTCCTCCTCGACACTTACATCAAGGACAACAAAGAGAGAGACCATCT 9186489 Query 59894 GTTCCGTGCCATAGAGACG-TCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCATGCAGT 59952 ||||| || || || || |||| || || | ||||| | ||||| ||| ||| Sbjct 9186490 CTTCCGCGCGATCGAAACCATCCCTTGC-GTCGCCAAGAAAGCCCAGTGGGCGATGAAGT 9186548 Query 59953 GGAT-GAGTCCTGGAGCATCA----TTTGCACAACGTCTCATAGCTTTTGCATGCGTGGA 60007 |||| || |||| | ||| ||||| | | || | ||||| || || || || Sbjct 9186549 GGATCGA----TGGATC-TCAGACTTTTGCCGAGAGAATCGTCGCTTTCGCCTGTGTCGA 9186603 Query 60008 AGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCAT 60067 ||| ||||||||||| || ||||| | ||||||||||| |||||||| || ||||| Sbjct 9186604 AGGTATCTTCTTCTCCGGTAGCTTCTGCTCGATTTTCTGGCTGAAAAAGCGAGGTCTCAT 9186663 Query 60068 GCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCATCAGGAGTT 60127 ||| || | | |||||||||||| |||| || || ||||| ||| | ||| || || Sbjct 9186664 GCCCGGATTAACCTTCTCCAACGAGTTGATCTCACGAGACGAAGGCTTACATTGCGATTT 9186723 Query 60128 TGCAGTGAC-GCTCTATTCACAC-CTATTGGAAAAATGCCCTTCCAAGGATATTCACAAG 60185 || ||| | | |||| ||| | || |||| || || | ||| |||| ||| Sbjct 9186724 CGC-GTGCCTGATCTA--CACGCTCTTGTGGACGAA-GCTC-TCCGAGGAGCGCGTGAAG 9186778 Query 60186 --ATTGTTCAGTG-GGCTTGTGAAGTGGAGAGCGAGTTCATCACAGAAGCGCTTCCATGC 60242 | | || | | || || | ||||| ||||| | || ||||| || ||| Sbjct 9186779 TCAATCGTCTGCGACGCCGTCGAGATCGAGAGGGAGTTTGTGTGCGACGCGCTGCCGTGC 9186838 Query 60243 AAACTCATAGGTATGGACGCTGGAGAAATGACGCAGTACATTCAGTTTGTCGCGGACCGC 60302 | |||| ||| || || |||| ||||||||| ||||||| || || | Sbjct 9186839 GCGTTGGTAGGGATGAACAGTGACCTGATGAGTCAGTACATTGAGTTTGTGGCAGATAGG 9186898 Query 60303 CTCATGGCCCAGTTTGGAGAAGGACCAATTTACGGCGTGAATAACCCTTTCGACTGGATG 60362 || ||| | | || | || | ||||| ||| ||| || || || |||||| Sbjct 9186899 CTTTTGGGGGCGCTCGGGTACGGTAAGGTGTACGGTGTGGCTAATCCGTTTGATTGGATG 9186958 Query 60363 GAGACCATCTCGTTGGAAGGGAAGACCAACTTCTTTGAGAAGCGGGTCGGGGATTA 60418 ||| |||||| | | ||||| || |||||||| |||||| | || || ||||| Sbjct 9186959 GAGTTAATCTCGCTTCAGGGGAAAACAAACTTCTTCGAGAAGAGAGTTGGCGATTA 9187014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548514809992080