Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21] 1,457 sequences; 137,073,209 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq3 104 2e-17 seq7 91.5 1e-13 >seq3 Length=15215380 Score = 104 bits (114), Expect = 2e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 118456 AGTTGGAGTTTCAGTGGCTCAATGTGATTCATATAGACATGAGCATCCCCAATTGTATGT 118515 ||||| || ||| ||| | |||| | | || || |||||||||||||| ||| Sbjct 11080594 AGTTGCTCTTGCAGAGGCCTCACGTGAGTTTTGTACACGTGAGCATCCCCAATACCATGG 11080535 Query 118516 ATGAATTCACCAGGTGTAAGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAG 118575 |||| ||||||||| ||| || |||||| | || | | || | | | |||| Sbjct 11080534 ATGATTTCACCAGGAACAAGATTGCACACGTGAGCGAGCAGGCAAGTAAGAAGAGAGTAG 11080475 Query 118576 CTGGCTACATTAAAAGGAACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAA 118635 || | |||||||| ||||| || ||||| |||||||| | ||| |||| |||||| Sbjct 11080474 GAAGCAATGTTAAAAGGCACACCAAGGCCCATATCTGCTGAACCCTGATACATTTGGCAT 11080415 Query 118636 GAGAGCTCCCCGTTTGCAACATAAA 118660 ||||||||||| | ||| ||||||| Sbjct 11080414 GAGAGCTCCCCTTCTGCTACATAAA 11080390 >seq7 Length=17055980 Score = 91.5 bits (100), Expect = 1e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 118585 TTAAAAGGAACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCC 118644 ||||| || ||||| |||||||| || ||||| | ||| |||| ||| || || ||||| Sbjct 15010535 TTAAACGGTACACCAAGACCCATATCAGCTGACCGCTGATACATTTGACATGAAAGCTCT 15010594 Query 118645 CCGTTTGCAACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCAT 118694 || ||||||||||||||||| | ||||| |||||||| || |||| Sbjct 15010595 CCATTTGCAACATAAAACTGCGCAAACATGTGGCATGGAGGAAGTGCCAT 15010644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414469440057748